RNA–Protein interactions for RNA: ENST00000575796.1

SPNS3-205, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-205ENST00000575796 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
SPNS3-205ENST00000575796 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
SPNS3-205ENST00000575796 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
SPNS3-205ENST00000575796 USP16Q9Y5T5 823 aa16.69■□□□□ 0.26
SPNS3-205ENST00000575796 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
SPNS3-205ENST00000575796 PTGER2P43116 358 aa16.68■□□□□ 0.26
SPNS3-205ENST00000575796 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
SPNS3-205ENST00000575796 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
SPNS3-205ENST00000575796 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
SPNS3-205ENST00000575796 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
SPNS3-205ENST00000575796 CHL1O00533 1208 aa16.67■□□□□ 0.26
SPNS3-205ENST00000575796 A1BGP04217 495 aa16.67■□□□□ 0.26
SPNS3-205ENST00000575796 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
SPNS3-205ENST00000575796 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
SPNS3-205ENST00000575796 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
SPNS3-205ENST00000575796 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
SPNS3-205ENST00000575796 STARD3NLO95772 234 aa16.66■□□□□ 0.26
SPNS3-205ENST00000575796 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
SPNS3-205ENST00000575796 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
SPNS3-205ENST00000575796 HMGB2P26583 209 aaKnown RBP16.65■□□□□ 0.26
SPNS3-205ENST00000575796 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
SPNS3-205ENST00000575796 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
SPNS3-205ENST00000575796 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
SPNS3-205ENST00000575796 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
SPNS3-205ENST00000575796 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
SPNS3-205ENST00000575796 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
SPNS3-205ENST00000575796 COL15A1P39059 1388 aa16.64■□□□□ 0.25
SPNS3-205ENST00000575796 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
SPNS3-205ENST00000575796 CCDC27Q2M243 656 aa16.63■□□□□ 0.25
SPNS3-205ENST00000575796 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
SPNS3-205ENST00000575796 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
SPNS3-205ENST00000575796 CFAP44Q96MT7 982 aa16.63■□□□□ 0.25
SPNS3-205ENST00000575796 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
SPNS3-205ENST00000575796 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
SPNS3-205ENST00000575796 ADRA2BP18089 450 aa16.62■□□□□ 0.25
SPNS3-205ENST00000575796 RFC4P35249 363 aa16.62■□□□□ 0.25
SPNS3-205ENST00000575796 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
SPNS3-205ENST00000575796 IFT57Q9NWB7 429 aa16.62■□□□□ 0.25
SPNS3-205ENST00000575796 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
SPNS3-205ENST00000575796 GYS1P13807 737 aa16.61■□□□□ 0.25
SPNS3-205ENST00000575796 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
SPNS3-205ENST00000575796 USP42Q9H9J4 1324 aaKnown RBP16.61■□□□□ 0.25
SPNS3-205ENST00000575796 SCN7AQ01118 1682 aa16.6■□□□□ 0.25
SPNS3-205ENST00000575796 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
SPNS3-205ENST00000575796 EIF2S2P20042 333 aaKnown RBP16.59■□□□□ 0.25
SPNS3-205ENST00000575796 GNAI1P63096 354 aa16.59■□□□□ 0.25
SPNS3-205ENST00000575796 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
SPNS3-205ENST00000575796 FKBP8Q14318 412 aa16.59■□□□□ 0.25
SPNS3-205ENST00000575796 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
SPNS3-205ENST00000575796 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
SPNS3-205ENST00000575796 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
SPNS3-205ENST00000575796 PPP1R1BQ9UD71 204 aaPredicted RBP16.59■□□□□ 0.25
SPNS3-205ENST00000575796 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
SPNS3-205ENST00000575796 ANXA1P04083 346 aa16.58■□□□□ 0.24
SPNS3-205ENST00000575796 POLD1P28340 1107 aa16.58■□□□□ 0.24
SPNS3-205ENST00000575796 IL6STP40189 918 aaPredicted RBP16.58■□□□□ 0.24
SPNS3-205ENST00000575796 ARXQ96QS3 562 aa16.58■□□□□ 0.24
SPNS3-205ENST00000575796 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
SPNS3-205ENST00000575796 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
SPNS3-205ENST00000575796 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
SPNS3-205ENST00000575796 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
SPNS3-205ENST00000575796 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
SPNS3-205ENST00000575796 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
SPNS3-205ENST00000575796 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
SPNS3-205ENST00000575796 MMP10P09238 476 aa16.56■□□□□ 0.24
SPNS3-205ENST00000575796 MYL6BP14649 208 aa16.56■□□□□ 0.24
SPNS3-205ENST00000575796 DUSP27Q5VZP5 1158 aa16.56■□□□□ 0.24
SPNS3-205ENST00000575796 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
SPNS3-205ENST00000575796 TSPYL6Q8N831 410 aa16.56■□□□□ 0.24
SPNS3-205ENST00000575796 IL16Q14005 1332 aa16.55■□□□□ 0.24
SPNS3-205ENST00000575796 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
SPNS3-205ENST00000575796 ZPR1O75312 459 aa16.55■□□□□ 0.24
SPNS3-205ENST00000575796 DDR1Q08345 913 aa16.55■□□□□ 0.24
SPNS3-205ENST00000575796 PDIA6Q15084 440 aa16.55■□□□□ 0.24
SPNS3-205ENST00000575796 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
SPNS3-205ENST00000575796 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SPNS3-205ENST00000575796 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
SPNS3-205ENST00000575796 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
SPNS3-205ENST00000575796 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
SPNS3-205ENST00000575796 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
SPNS3-205ENST00000575796 WDR63Q8IWG1 891 aa16.54■□□□□ 0.24
SPNS3-205ENST00000575796 A0A087WZG4 1122 aa16.53■□□□□ 0.24
SPNS3-205ENST00000575796 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
SPNS3-205ENST00000575796 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
SPNS3-205ENST00000575796 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
SPNS3-205ENST00000575796 AFDNP55196 1824 aaKnown RBP16.52■□□□□ 0.24
SPNS3-205ENST00000575796 NFIXQ14938 502 aa16.52■□□□□ 0.24
SPNS3-205ENST00000575796 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
SPNS3-205ENST00000575796 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
SPNS3-205ENST00000575796 NLGN2Q8NFZ4 835 aa16.51■□□□□ 0.23
SPNS3-205ENST00000575796 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
SPNS3-205ENST00000575796 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
SPNS3-205ENST00000575796 HOXB7P09629 217 aa16.5■□□□□ 0.23
SPNS3-205ENST00000575796 TM4SF1P30408 202 aa16.5■□□□□ 0.23
SPNS3-205ENST00000575796 HLFQ16534 295 aa16.5■□□□□ 0.23
SPNS3-205ENST00000575796 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
SPNS3-205ENST00000575796 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
SPNS3-205ENST00000575796 NUP98P52948 1817 aa16.49■□□□□ 0.23
SPNS3-205ENST00000575796 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
SPNS3-205ENST00000575796 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms