RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 TEX13AQ9BXU3 409 aaPredicted RBP21.16■□□□□ 0.98
PFN1-203ENST00000574872 CCDC87Q9NVE4 849 aa21.16■□□□□ 0.98
PFN1-203ENST00000574872 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
PFN1-203ENST00000574872 MYH14Q7Z406 1995 aaKnown RBP21.16■□□□□ 0.98
PFN1-203ENST00000574872 IL16Q14005 1332 aa21.15■□□□□ 0.98
PFN1-203ENST00000574872 MSH5O43196 834 aa21.15■□□□□ 0.98
PFN1-203ENST00000574872 GIGYF1O75420 1035 aaPredicted RBP21.15■□□□□ 0.98
PFN1-203ENST00000574872 RC3H1Q5TC82 1133 aaKnown RBP21.15■□□□□ 0.98
PFN1-203ENST00000574872 ZBTB1Q9Y2K1 713 aa21.15■□□□□ 0.98
PFN1-203ENST00000574872 ZNF521Q96K83 1311 aa21.14■□□□□ 0.97
PFN1-203ENST00000574872 CANXP27824 592 aaKnown RBP21.14■□□□□ 0.97
PFN1-203ENST00000574872 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
PFN1-203ENST00000574872 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
PFN1-203ENST00000574872 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
PFN1-203ENST00000574872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
PFN1-203ENST00000574872 A1BGP04217 495 aa21.13■□□□□ 0.97
PFN1-203ENST00000574872 HNRNPUQ00839 825 aaKnown RBP eCLIP21.13■□□□□ 0.97
PFN1-203ENST00000574872 COL23A1Q86Y22 540 aaPredicted RBP21.13■□□□□ 0.97
PFN1-203ENST00000574872 SPINK5Q9NQ38 1064 aaPredicted RBP21.13■□□□□ 0.97
PFN1-203ENST00000574872 RPS6KA4O75676 772 aa21.12■□□□□ 0.97
PFN1-203ENST00000574872 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
PFN1-203ENST00000574872 EIF2S2P20042 333 aaKnown RBP21.11■□□□□ 0.97
PFN1-203ENST00000574872 SSFA2P28290 1259 aa21.11■□□□□ 0.97
PFN1-203ENST00000574872 NECTIN2Q92692 538 aa21.11■□□□□ 0.97
PFN1-203ENST00000574872 ZNF330Q9Y3S2 320 aaPredicted RBP21.11■□□□□ 0.97
PFN1-203ENST00000574872 LAMB4A4D0S4 1761 aa21.1■□□□□ 0.97
PFN1-203ENST00000574872 CASZ1Q86V15 1759 aa21.1■□□□□ 0.97
PFN1-203ENST00000574872 QSER1Q2KHR3 1735 aa21.1■□□□□ 0.97
PFN1-203ENST00000574872 ELL2O00472 640 aaPredicted RBP21.1■□□□□ 0.97
PFN1-203ENST00000574872 ZBTB7AO95365 584 aa21.1■□□□□ 0.97
PFN1-203ENST00000574872 SOS1Q07889 1333 aaPredicted RBP21.09■□□□□ 0.97
PFN1-203ENST00000574872 TRAPPC3LQ5T215 181 aa21.09■□□□□ 0.97
PFN1-203ENST00000574872 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
PFN1-203ENST00000574872 C8orf58Q8NAV2 365 aa21.09■□□□□ 0.97
PFN1-203ENST00000574872 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
PFN1-203ENST00000574872 GOLGA2Q08379 1002 aa21.08■□□□□ 0.97
PFN1-203ENST00000574872 ARHGEF1Q92888 912 aaKnown RBP21.08■□□□□ 0.97
PFN1-203ENST00000574872 MYH16Q9H6N6 1097 aa21.08■□□□□ 0.97
PFN1-203ENST00000574872 COL15A1P39059 1388 aa21.07■□□□□ 0.96
PFN1-203ENST00000574872 NBPF26B4DH59 902 aa21.06■□□□□ 0.96
PFN1-203ENST00000574872 ADRA2BP18089 450 aa21.06■□□□□ 0.96
PFN1-203ENST00000574872 MSL1Q68DK7 614 aa21.06■□□□□ 0.96
PFN1-203ENST00000574872 NBPF10Q6P3W6 841 aaKnown RBP21.06■□□□□ 0.96
PFN1-203ENST00000574872 NBPF15Q8N660 670 aa21.06■□□□□ 0.96
PFN1-203ENST00000574872 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
PFN1-203ENST00000574872 CDCA7LQ96GN5 454 aa21.06■□□□□ 0.96
PFN1-203ENST00000574872 RFC4P35249 363 aa21.05■□□□□ 0.96
PFN1-203ENST00000574872 EIF5P55010 431 aaKnown RBP21.05■□□□□ 0.96
PFN1-203ENST00000574872 HDGFL1Q5TGJ6 251 aa21.05■□□□□ 0.96
PFN1-203ENST00000574872 ARXQ96QS3 562 aa21.05■□□□□ 0.96
PFN1-203ENST00000574872 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
PFN1-203ENST00000574872 ATF5Q9Y2D1 282 aaPredicted RBP21.05■□□□□ 0.96
PFN1-203ENST00000574872 E9PSI1 815 aa21.04■□□□□ 0.96
PFN1-203ENST00000574872 MYL6BP14649 208 aa21.04■□□□□ 0.96
PFN1-203ENST00000574872 IL6STP40189 918 aaPredicted RBP21.04■□□□□ 0.96
PFN1-203ENST00000574872 EXOSC9Q06265 439 aaKnown RBP21.04■□□□□ 0.96
PFN1-203ENST00000574872 C4AP0C0L4 1744 aa21.04■□□□□ 0.96
PFN1-203ENST00000574872 ANXA1P04083 346 aa21.03■□□□□ 0.96
PFN1-203ENST00000574872 HOXB7P09629 217 aa21.03■□□□□ 0.96
PFN1-203ENST00000574872 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
PFN1-203ENST00000574872 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
PFN1-203ENST00000574872 PROSER3Q2NL68 480 aa21.02■□□□□ 0.96
PFN1-203ENST00000574872 MTFR1LQ9H019 292 aa21.02■□□□□ 0.96
PFN1-203ENST00000574872 TBC1D2BQ9UPU7 963 aa21.02■□□□□ 0.96
PFN1-203ENST00000574872 TWISTNBQ3B726 338 aaPredicted RBP21.01■□□□□ 0.95
PFN1-203ENST00000574872 SLC16A10Q8TF71 515 aa21.01■□□□□ 0.95
PFN1-203ENST00000574872 CHPF2Q9P2E5 772 aa21.01■□□□□ 0.95
PFN1-203ENST00000574872 A0A087WZG4 1122 aa21■□□□□ 0.95
PFN1-203ENST00000574872 ZPR1O75312 459 aa21■□□□□ 0.95
PFN1-203ENST00000574872 PDIA6Q15084 440 aa21■□□□□ 0.95
PFN1-203ENST00000574872 ERBB4Q15303 1308 aa21■□□□□ 0.95
PFN1-203ENST00000574872 USP42Q9H9J4 1324 aaKnown RBP21■□□□□ 0.95
PFN1-203ENST00000574872 TCERG1O14776 1098 aaKnown RBP20.99■□□□□ 0.95
PFN1-203ENST00000574872 USPL1Q5W0Q7 1092 aa20.99■□□□□ 0.95
PFN1-203ENST00000574872 SPON1Q9HCB6 807 aa20.99■□□□□ 0.95
PFN1-203ENST00000574872 SRCAPQ6ZRS2 3230 aa20.99■□□□□ 0.95
PFN1-203ENST00000574872 GYS1P13807 737 aa20.98■□□□□ 0.95
PFN1-203ENST00000574872 DZIP3Q86Y13 1208 aaKnown RBP20.98■□□□□ 0.95
PFN1-203ENST00000574872 NARFQ9UHQ1 456 aa20.98■□□□□ 0.95
PFN1-203ENST00000574872 ZBED9Q6R2W3 1325 aa20.98■□□□□ 0.95
PFN1-203ENST00000574872 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
PFN1-203ENST00000574872 FKBP8Q14318 412 aa20.96■□□□□ 0.95
PFN1-203ENST00000574872 TTLL7Q6ZT98 887 aa20.96■□□□□ 0.95
PFN1-203ENST00000574872 LRP10Q7Z4F1 713 aa20.96■□□□□ 0.95
PFN1-203ENST00000574872 DBF4Q9UBU7 674 aaPredicted RBP20.96■□□□□ 0.95
PFN1-203ENST00000574872 VAMP4O75379 141 aa20.95■□□□□ 0.94
PFN1-203ENST00000574872 CAMTA2O94983 1202 aa20.95■□□□□ 0.94
PFN1-203ENST00000574872 PTGER2P43116 358 aa20.95■□□□□ 0.94
PFN1-203ENST00000574872 AIMP1Q12904 312 aaKnown RBP20.95■□□□□ 0.94
PFN1-203ENST00000574872 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
PFN1-203ENST00000574872 YTHDC1Q96MU7 727 aaKnown RBP20.95■□□□□ 0.94
PFN1-203ENST00000574872 BCL2L12Q9HB09 334 aa20.95■□□□□ 0.94
PFN1-203ENST00000574872 POLD1P28340 1107 aa20.94■□□□□ 0.94
PFN1-203ENST00000574872 KIF6Q6ZMV9 814 aa20.94■□□□□ 0.94
PFN1-203ENST00000574872 TRMT2AQ8IZ69 625 aaKnown RBP20.94■□□□□ 0.94
PFN1-203ENST00000574872 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
PFN1-203ENST00000574872 SCN7AQ01118 1682 aa20.93■□□□□ 0.94
PFN1-203ENST00000574872 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
PFN1-203ENST00000574872 NLGN1Q8N2Q7 840 aa20.93■□□□□ 0.94
PFN1-203ENST00000574872 SGIP1Q9BQI5 828 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms