RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 LAS1LQ9Y4W2 734 aaKnown RBP31.72■■■□□ 2.67
LITAF-213ENST00000574701 TRAPPC3LQ5T215 181 aa31.71■■■□□ 2.67
LITAF-213ENST00000574701 INTS5Q6P9B9 1019 aaKnown RBP31.7■■■□□ 2.67
LITAF-213ENST00000574701 ATF5Q9Y2D1 282 aaPredicted RBP31.7■■■□□ 2.67
LITAF-213ENST00000574701 EIF4A1P60842 406 aaKnown RBP31.69■■■□□ 2.66
LITAF-213ENST00000574701 CCDC27Q2M243 656 aa31.69■■■□□ 2.66
LITAF-213ENST00000574701 NCBP3Q53F19 620 aaKnown RBP31.69■■■□□ 2.66
LITAF-213ENST00000574701 SMIM5Q71RC9 77 aa31.69■■■□□ 2.66
LITAF-213ENST00000574701 ZBTB1Q9Y2K1 713 aa31.69■■■□□ 2.66
LITAF-213ENST00000574701 C4AP0C0L4 1744 aa31.69■■■□□ 2.66
LITAF-213ENST00000574701 SENP3-EIF4A1A0A087X0R7 540 aa31.68■■■□□ 2.66
LITAF-213ENST00000574701 MIER1Q8N108 512 aa31.67■■■□□ 2.66
LITAF-213ENST00000574701 CFAP44Q96MT7 982 aa31.66■■■□□ 2.66
LITAF-213ENST00000574701 SOS1Q07889 1333 aaPredicted RBP31.66■■■□□ 2.66
LITAF-213ENST00000574701 CHL1O00533 1208 aa31.65■■■□□ 2.66
LITAF-213ENST00000574701 CANXP27824 592 aaKnown RBP31.65■■■□□ 2.66
LITAF-213ENST00000574701 RFC4P35249 363 aa31.65■■■□□ 2.66
LITAF-213ENST00000574701 IFT57Q9NWB7 429 aa31.65■■■□□ 2.66
LITAF-213ENST00000574701 COL24A1Q17RW2 1714 aa31.64■■■□□ 2.66
LITAF-213ENST00000574701 PRAMEF22A3QJZ6 481 aa31.64■■■□□ 2.66
LITAF-213ENST00000574701 POLD1P28340 1107 aa31.64■■■□□ 2.66
LITAF-213ENST00000574701 GNAI1P63096 354 aa31.64■■■□□ 2.66
LITAF-213ENST00000574701 ARHGEF1Q92888 912 aaKnown RBP31.64■■■□□ 2.66
LITAF-213ENST00000574701 PPP1R1BQ9UD71 204 aaPredicted RBP31.64■■■□□ 2.66
LITAF-213ENST00000574701 COL15A1P39059 1388 aa31.64■■■□□ 2.66
LITAF-213ENST00000574701 GIGYF1O75420 1035 aaPredicted RBP31.63■■■□□ 2.65
LITAF-213ENST00000574701 WWC1Q8IX03 1113 aa31.63■■■□□ 2.65
LITAF-213ENST00000574701 USP16Q9Y5T5 823 aa31.63■■■□□ 2.65
LITAF-213ENST00000574701 MSL1Q68DK7 614 aa31.62■■■□□ 2.65
LITAF-213ENST00000574701 NPM2Q86SE8 214 aaKnown RBP31.62■■■□□ 2.65
LITAF-213ENST00000574701 NGEFQ8N5V2 710 aa31.62■■■□□ 2.65
LITAF-213ENST00000574701 SALL2Q9Y467 1007 aaPredicted RBP31.62■■■□□ 2.65
LITAF-213ENST00000574701 PTGER2P43116 358 aa31.6■■■□□ 2.65
LITAF-213ENST00000574701 ZNF330Q9Y3S2 320 aaPredicted RBP31.6■■■□□ 2.65
LITAF-213ENST00000574701 A1BGP04217 495 aa31.59■■■□□ 2.65
LITAF-213ENST00000574701 IL6STP40189 918 aaPredicted RBP31.59■■■□□ 2.65
LITAF-213ENST00000574701 MBIPQ9NS73 344 aa31.59■■■□□ 2.65
LITAF-213ENST00000574701 A0A087WZG4 1122 aa31.58■■■□□ 2.65
LITAF-213ENST00000574701 ZNF853P0CG23 659 aa31.58■■■□□ 2.65
LITAF-213ENST00000574701 SGIP1Q9BQI5 828 aa31.57■■■□□ 2.64
LITAF-213ENST00000574701 USP42Q9H9J4 1324 aaKnown RBP31.56■■■□□ 2.64
LITAF-213ENST00000574701 ZPR1O75312 459 aa31.56■■■□□ 2.64
LITAF-213ENST00000574701 EIF5P55010 431 aaKnown RBP31.56■■■□□ 2.64
LITAF-213ENST00000574701 IL16Q14005 1332 aa31.55■■■□□ 2.64
LITAF-213ENST00000574701 WDR63Q8IWG1 891 aa31.53■■■□□ 2.64
LITAF-213ENST00000574701 NLGN1Q8N2Q7 840 aa31.53■■■□□ 2.64
LITAF-213ENST00000574701 ARXQ96QS3 562 aa31.53■■■□□ 2.64
LITAF-213ENST00000574701 SRP68Q9UHB9 627 aaKnown RBP31.53■■■□□ 2.64
LITAF-213ENST00000574701 GYS1P13807 737 aa31.52■■■□□ 2.64
LITAF-213ENST00000574701 PIP4K2AP48426 406 aaPredicted RBP31.52■■■□□ 2.64
LITAF-213ENST00000574701 NARFQ9UHQ1 456 aa31.52■■■□□ 2.64
LITAF-213ENST00000574701 ERBB4Q15303 1308 aa31.51■■■□□ 2.64
LITAF-213ENST00000574701 SCN7AQ01118 1682 aa31.51■■■□□ 2.64
LITAF-213ENST00000574701 HOXB7P09629 217 aa31.5■■■□□ 2.63
LITAF-213ENST00000574701 EIF2S2P20042 333 aaKnown RBP31.5■■■□□ 2.63
LITAF-213ENST00000574701 KRT24Q2M2I5 525 aa31.5■■■□□ 2.63
LITAF-213ENST00000574701 USPL1Q5W0Q7 1092 aa31.49■■■□□ 2.63
LITAF-213ENST00000574701 NBPF26B4DH59 902 aa31.48■■■□□ 2.63
LITAF-213ENST00000574701 NBPF10Q6P3W6 841 aaKnown RBP31.48■■■□□ 2.63
LITAF-213ENST00000574701 NBPF15Q8N660 670 aa31.48■■■□□ 2.63
LITAF-213ENST00000574701 BCORQ6W2J9 1755 aa31.47■■■□□ 2.63
LITAF-213ENST00000574701 DUSP27Q5VZP5 1158 aa31.46■■■□□ 2.63
LITAF-213ENST00000574701 DZIP3Q86Y13 1208 aaKnown RBP31.46■■■□□ 2.63
LITAF-213ENST00000574701 TSR2Q969E8 191 aaKnown RBP31.46■■■□□ 2.63
LITAF-213ENST00000574701 TBC1D2BQ9UPU7 963 aa31.46■■■□□ 2.63
LITAF-213ENST00000574701 MMP10P09238 476 aa31.45■■■□□ 2.63
LITAF-213ENST00000574701 KLHL34Q8N239 644 aa31.45■■■□□ 2.63
LITAF-213ENST00000574701 MYL6BP14649 208 aa31.44■■■□□ 2.62
LITAF-213ENST00000574701 FKBP8Q14318 412 aa31.44■■■□□ 2.62
LITAF-213ENST00000574701 HDGFL1Q5TGJ6 251 aa31.44■■■□□ 2.62
LITAF-213ENST00000574701 NECTIN2Q92692 538 aa31.43■■■□□ 2.62
LITAF-213ENST00000574701 PARP3Q9Y6F1 533 aa31.42■■■□□ 2.62
LITAF-213ENST00000574701 FANCIQ9NVI1 1328 aa31.42■■■□□ 2.62
LITAF-213ENST00000574701 FHDC1Q9C0D6 1143 aaPredicted RBP31.41■■■□□ 2.62
LITAF-213ENST00000574701 MYH16Q9H6N6 1097 aa31.41■■■□□ 2.62
LITAF-213ENST00000574701 CHMP4AQ9BY43 222 aa31.4■■■□□ 2.62
LITAF-213ENST00000574701 ELL2O00472 640 aaPredicted RBP31.39■■■□□ 2.62
LITAF-213ENST00000574701 CAMTA2O94983 1202 aa31.39■■■□□ 2.62
LITAF-213ENST00000574701 KIF6Q6ZMV9 814 aa31.39■■■□□ 2.62
LITAF-213ENST00000574701 BCL2L12Q9HB09 334 aa31.39■■■□□ 2.62
LITAF-213ENST00000574701 ZNF652Q9Y2D9 606 aa31.39■■■□□ 2.62
LITAF-213ENST00000574701 ZNF521Q96K83 1311 aa31.39■■■□□ 2.62
LITAF-213ENST00000574701 GOLGA2Q08379 1002 aa31.38■■■□□ 2.61
LITAF-213ENST00000574701 C8orf58Q8NAV2 365 aa31.38■■■□□ 2.61
LITAF-213ENST00000574701 DDX21Q9NR30 783 aaKnown RBP eCLIP31.36■■■□□ 2.61
LITAF-213ENST00000574701 CHPF2Q9P2E5 772 aa31.36■■■□□ 2.61
LITAF-213ENST00000574701 PDIA6Q15084 440 aa31.35■■■□□ 2.61
LITAF-213ENST00000574701 SYT17Q9BSW7 474 aa31.35■■■□□ 2.61
LITAF-213ENST00000574701 DBF4Q9UBU7 674 aaPredicted RBP31.35■■■□□ 2.61
LITAF-213ENST00000574701 RGL2O15211 777 aa31.34■■■□□ 2.61
LITAF-213ENST00000574701 ANXA1P04083 346 aa31.34■■■□□ 2.61
LITAF-213ENST00000574701 NFIXQ14938 502 aa31.34■■■□□ 2.61
LITAF-213ENST00000574701 PROSER3Q2NL68 480 aa31.34■■■□□ 2.61
LITAF-213ENST00000574701 BICDL1Q6ZP65 573 aa31.34■■■□□ 2.61
LITAF-213ENST00000574701 SRCAPQ6ZRS2 3230 aa31.34■■■□□ 2.61
LITAF-213ENST00000574701 TM4SF1P30408 202 aa31.33■■■□□ 2.61
LITAF-213ENST00000574701 DDR1Q08345 913 aa31.33■■■□□ 2.61
LITAF-213ENST00000574701 TWISTNBQ3B726 338 aaPredicted RBP31.33■■■□□ 2.61
LITAF-213ENST00000574701 MAP3K15Q6ZN16 1313 aa31.32■■■□□ 2.6
LITAF-213ENST00000574701 CCDC30Q5VVM6 783 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms