RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 QSER1Q2KHR3 1735 aa22.5■■□□□ 1.19
LITAF-212ENST00000573332 ADRA2BP18089 450 aa22.49■■□□□ 1.19
LITAF-212ENST00000573332 AMIGO3Q86WK7 504 aa22.49■■□□□ 1.19
LITAF-212ENST00000573332 SLC16A10Q8TF71 515 aa22.49■■□□□ 1.19
LITAF-212ENST00000573332 MBIPQ9NS73 344 aa22.49■■□□□ 1.19
LITAF-212ENST00000573332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
LITAF-212ENST00000573332 COL23A1Q86Y22 540 aaPredicted RBP22.48■■□□□ 1.19
LITAF-212ENST00000573332 PDGFDQ9GZP0 370 aaPredicted RBP22.48■■□□□ 1.19
LITAF-212ENST00000573332 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
LITAF-212ENST00000573332 ZNF521Q96K83 1311 aa22.48■■□□□ 1.19
LITAF-212ENST00000573332 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
LITAF-212ENST00000573332 CASZ1Q86V15 1759 aa22.46■■□□□ 1.19
LITAF-212ENST00000573332 ZBTB1Q9Y2K1 713 aa22.46■■□□□ 1.19
LITAF-212ENST00000573332 TRAPPC3LQ5T215 181 aa22.45■■□□□ 1.18
LITAF-212ENST00000573332 SOS1Q07889 1333 aaPredicted RBP22.45■■□□□ 1.18
LITAF-212ENST00000573332 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.18
LITAF-212ENST00000573332 HOXB7P09629 217 aa22.44■■□□□ 1.18
LITAF-212ENST00000573332 MYH14Q7Z406 1995 aaKnown RBP22.44■■□□□ 1.18
LITAF-212ENST00000573332 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
LITAF-212ENST00000573332 PHF14O94880 888 aa22.43■■□□□ 1.18
LITAF-212ENST00000573332 A1BGP04217 495 aa22.43■■□□□ 1.18
LITAF-212ENST00000573332 IL6STP40189 918 aaPredicted RBP22.43■■□□□ 1.18
LITAF-212ENST00000573332 EIF5P55010 431 aaKnown RBP22.43■■□□□ 1.18
LITAF-212ENST00000573332 SMIM5Q71RC9 77 aa22.43■■□□□ 1.18
LITAF-212ENST00000573332 ARHGEF1Q92888 912 aaKnown RBP22.43■■□□□ 1.18
LITAF-212ENST00000573332 MTFR1LQ9H019 292 aa22.43■■□□□ 1.18
LITAF-212ENST00000573332 ERBB4Q15303 1308 aa22.41■■□□□ 1.18
LITAF-212ENST00000573332 CANXP27824 592 aaKnown RBP22.41■■□□□ 1.18
LITAF-212ENST00000573332 KRT24Q2M2I5 525 aa22.4■■□□□ 1.18
LITAF-212ENST00000573332 SPON1Q9HCB6 807 aa22.4■■□□□ 1.18
LITAF-212ENST00000573332 NBPF26B4DH59 902 aa22.39■■□□□ 1.17
LITAF-212ENST00000573332 MSH5O43196 834 aa22.39■■□□□ 1.17
LITAF-212ENST00000573332 ZBTB7AO95365 584 aa22.39■■□□□ 1.17
LITAF-212ENST00000573332 RFC4P35249 363 aa22.39■■□□□ 1.17
LITAF-212ENST00000573332 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.17
LITAF-212ENST00000573332 NBPF10Q6P3W6 841 aaKnown RBP22.39■■□□□ 1.17
LITAF-212ENST00000573332 NBPF15Q8N660 670 aa22.39■■□□□ 1.17
LITAF-212ENST00000573332 SPINK5Q9NQ38 1064 aaPredicted RBP22.39■■□□□ 1.17
LITAF-212ENST00000573332 COL15A1P39059 1388 aa22.38■■□□□ 1.17
LITAF-212ENST00000573332 A0A087WZG4 1122 aa22.38■■□□□ 1.17
LITAF-212ENST00000573332 TSR2Q969E8 191 aaKnown RBP22.38■■□□□ 1.17
LITAF-212ENST00000573332 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
LITAF-212ENST00000573332 GOLGA2Q08379 1002 aa22.37■■□□□ 1.17
LITAF-212ENST00000573332 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
LITAF-212ENST00000573332 USP42Q9H9J4 1324 aaKnown RBP22.36■■□□□ 1.17
LITAF-212ENST00000573332 FANCIQ9NVI1 1328 aa22.36■■□□□ 1.17
LITAF-212ENST00000573332 C8orf58Q8NAV2 365 aa22.36■■□□□ 1.17
LITAF-212ENST00000573332 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
LITAF-212ENST00000573332 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
LITAF-212ENST00000573332 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
LITAF-212ENST00000573332 PTGER2P43116 358 aa22.35■■□□□ 1.17
LITAF-212ENST00000573332 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
LITAF-212ENST00000573332 ATF5Q9Y2D1 282 aaPredicted RBP22.35■■□□□ 1.17
LITAF-212ENST00000573332 E9PSI1 815 aa22.34■■□□□ 1.17
LITAF-212ENST00000573332 GYS1P13807 737 aa22.34■■□□□ 1.17
LITAF-212ENST00000573332 PDIA6Q15084 440 aa22.34■■□□□ 1.17
LITAF-212ENST00000573332 NPM2Q86SE8 214 aaKnown RBP22.34■■□□□ 1.17
LITAF-212ENST00000573332 NLGN1Q8N2Q7 840 aa22.34■■□□□ 1.17
LITAF-212ENST00000573332 ZPR1O75312 459 aa22.33■■□□□ 1.17
LITAF-212ENST00000573332 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.17
LITAF-212ENST00000573332 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.17
LITAF-212ENST00000573332 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.17
LITAF-212ENST00000573332 RGL2O15211 777 aa22.32■■□□□ 1.16
LITAF-212ENST00000573332 SLFN5Q08AF3 891 aa22.32■■□□□ 1.16
LITAF-212ENST00000573332 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
LITAF-212ENST00000573332 DDX21Q9NR30 783 aaKnown RBP eCLIP22.32■■□□□ 1.16
LITAF-212ENST00000573332 SRP68Q9UHB9 627 aaKnown RBP22.32■■□□□ 1.16
LITAF-212ENST00000573332 LRP5O75197 1615 aa22.31■■□□□ 1.16
LITAF-212ENST00000573332 COL24A1Q17RW2 1714 aa22.31■■□□□ 1.16
LITAF-212ENST00000573332 ELL2O00472 640 aaPredicted RBP22.31■■□□□ 1.16
LITAF-212ENST00000573332 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
LITAF-212ENST00000573332 USPL1Q5W0Q7 1092 aa22.31■■□□□ 1.16
LITAF-212ENST00000573332 POLD1P28340 1107 aa22.3■■□□□ 1.16
LITAF-212ENST00000573332 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
LITAF-212ENST00000573332 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
LITAF-212ENST00000573332 TRMT2AQ8IZ69 625 aaKnown RBP22.3■■□□□ 1.16
LITAF-212ENST00000573332 DBF4Q9UBU7 674 aaPredicted RBP22.3■■□□□ 1.16
LITAF-212ENST00000573332 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
LITAF-212ENST00000573332 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
LITAF-212ENST00000573332 C4AP0C0L4 1744 aa22.3■■□□□ 1.16
LITAF-212ENST00000573332 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
LITAF-212ENST00000573332 MYL6BP14649 208 aa22.29■■□□□ 1.16
LITAF-212ENST00000573332 EXOSC9Q06265 439 aaKnown RBP22.29■■□□□ 1.16
LITAF-212ENST00000573332 MSL1Q68DK7 614 aa22.29■■□□□ 1.16
LITAF-212ENST00000573332 BCL2L12Q9HB09 334 aa22.29■■□□□ 1.16
LITAF-212ENST00000573332 NECTIN2Q92692 538 aa22.28■■□□□ 1.16
LITAF-212ENST00000573332 VAMP4O75379 141 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 FKBP8Q14318 412 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 PROSER3Q2NL68 480 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 CCDC30Q5VVM6 783 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 CLEC4GQ6UXB4 293 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 CHPF2Q9P2E5 772 aa22.27■■□□□ 1.16
LITAF-212ENST00000573332 ERVV-1B6SEH8 477 aa22.26■■□□□ 1.15
LITAF-212ENST00000573332 TM4SF1P30408 202 aa22.26■■□□□ 1.15
LITAF-212ENST00000573332 HYPKQ9NX55 129 aa22.26■■□□□ 1.15
LITAF-212ENST00000573332 ARXQ96QS3 562 aa22.25■■□□□ 1.15
LITAF-212ENST00000573332 ANXA1P04083 346 aa22.24■■□□□ 1.15
LITAF-212ENST00000573332 MMP10P09238 476 aa22.24■■□□□ 1.15
LITAF-212ENST00000573332 TTLL7Q6ZT98 887 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms