RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 MIS18AQ9NYP9 233 aa29.98■■■□□ 2.39
SLC12A4-205ENST00000570616 ARHGEF1Q92888 912 aaKnown RBP29.97■■■□□ 2.39
SLC12A4-205ENST00000570616 SOS1Q07889 1333 aaPredicted RBP29.96■■■□□ 2.39
SLC12A4-205ENST00000570616 SNRPA1P09661 255 aaKnown RBP29.96■■■□□ 2.39
SLC12A4-205ENST00000570616 MSL1Q68DK7 614 aa29.96■■■□□ 2.39
SLC12A4-205ENST00000570616 ZBTB1Q9Y2K1 713 aa29.96■■■□□ 2.39
SLC12A4-205ENST00000570616 BABAM1Q9NWV8 329 aa29.95■■■□□ 2.39
SLC12A4-205ENST00000570616 KDM3BQ7LBC6 1761 aa29.95■■■□□ 2.38
SLC12A4-205ENST00000570616 ARXQ96QS3 562 aa29.94■■■□□ 2.38
SLC12A4-205ENST00000570616 RFC4P35249 363 aa29.93■■■□□ 2.38
SLC12A4-205ENST00000570616 TSPYL4Q9UJ04 414 aa29.93■■■□□ 2.38
SLC12A4-205ENST00000570616 EIF4A1P60842 406 aaKnown RBP29.91■■■□□ 2.38
SLC12A4-205ENST00000570616 COL15A1P39059 1388 aa29.9■■■□□ 2.38
SLC12A4-205ENST00000570616 USP16Q9Y5T5 823 aa29.9■■■□□ 2.38
SLC12A4-205ENST00000570616 C4AP0C0L4 1744 aa29.9■■■□□ 2.38
SLC12A4-205ENST00000570616 PRAMEF22A3QJZ6 481 aa29.89■■■□□ 2.38
SLC12A4-205ENST00000570616 CANXP27824 592 aaKnown RBP29.89■■■□□ 2.38
SLC12A4-205ENST00000570616 USP42Q9H9J4 1324 aaKnown RBP29.89■■■□□ 2.38
SLC12A4-205ENST00000570616 GYS1P13807 737 aa29.87■■■□□ 2.37
SLC12A4-205ENST00000570616 CHL1O00533 1208 aa29.86■■■□□ 2.37
SLC12A4-205ENST00000570616 GIGYF1O75420 1035 aaPredicted RBP29.86■■■□□ 2.37
SLC12A4-205ENST00000570616 A1BGP04217 495 aa29.86■■■□□ 2.37
SLC12A4-205ENST00000570616 EIF5P55010 431 aaKnown RBP29.86■■■□□ 2.37
SLC12A4-205ENST00000570616 NLGN1Q8N2Q7 840 aa29.86■■■□□ 2.37
SLC12A4-205ENST00000570616 FHDC1Q9C0D6 1143 aaPredicted RBP29.86■■■□□ 2.37
SLC12A4-205ENST00000570616 IL6STP40189 918 aaPredicted RBP29.85■■■□□ 2.37
SLC12A4-205ENST00000570616 SRP68Q9UHB9 627 aaKnown RBP29.85■■■□□ 2.37
SLC12A4-205ENST00000570616 CALD1Q05682 793 aaKnown RBP29.84■■■□□ 2.37
SLC12A4-205ENST00000570616 A0A087WZG4 1122 aa29.83■■■□□ 2.37
SLC12A4-205ENST00000570616 CCDC27Q2M243 656 aa29.83■■■□□ 2.37
SLC12A4-205ENST00000570616 NCBP3Q53F19 620 aaKnown RBP29.83■■■□□ 2.37
SLC12A4-205ENST00000570616 CFAP44Q96MT7 982 aa29.83■■■□□ 2.37
SLC12A4-205ENST00000570616 ZPR1O75312 459 aa29.82■■■□□ 2.36
SLC12A4-205ENST00000570616 FAM9BQ8IZU0 186 aa29.82■■■□□ 2.36
SLC12A4-205ENST00000570616 NARFQ9UHQ1 456 aa29.82■■■□□ 2.36
SLC12A4-205ENST00000570616 LAMB4A4D0S4 1761 aa29.82■■■□□ 2.36
SLC12A4-205ENST00000570616 SYT17Q9BSW7 474 aa29.81■■■□□ 2.36
SLC12A4-205ENST00000570616 LAS1LQ9Y4W2 734 aaKnown RBP29.81■■■□□ 2.36
SLC12A4-205ENST00000570616 MMP10P09238 476 aa29.8■■■□□ 2.36
SLC12A4-205ENST00000570616 FKBP8Q14318 412 aa29.79■■■□□ 2.36
SLC12A4-205ENST00000570616 USPL1Q5W0Q7 1092 aa29.79■■■□□ 2.36
SLC12A4-205ENST00000570616 IFT57Q9NWB7 429 aa29.79■■■□□ 2.36
SLC12A4-205ENST00000570616 CCER2I3L3R5 266 aa29.78■■■□□ 2.36
SLC12A4-205ENST00000570616 ZNF853P0CG23 659 aa29.78■■■□□ 2.36
SLC12A4-205ENST00000570616 NPM2Q86SE8 214 aaKnown RBP29.78■■■□□ 2.36
SLC12A4-205ENST00000570616 ZNF330Q9Y3S2 320 aaPredicted RBP29.78■■■□□ 2.36
SLC12A4-205ENST00000570616 NBPF26B4DH59 902 aa29.77■■■□□ 2.36
SLC12A4-205ENST00000570616 NBPF10Q6P3W6 841 aaKnown RBP29.77■■■□□ 2.36
SLC12A4-205ENST00000570616 NBPF15Q8N660 670 aa29.77■■■□□ 2.36
SLC12A4-205ENST00000570616 PIP4K2AP48426 406 aaPredicted RBP29.76■■■□□ 2.35
SLC12A4-205ENST00000570616 GNAI1P63096 354 aa29.76■■■□□ 2.35
SLC12A4-205ENST00000570616 DIEXFQ68CQ4 756 aaKnown RBP29.76■■■□□ 2.35
SLC12A4-205ENST00000570616 KLHL34Q8N239 644 aa29.76■■■□□ 2.35
SLC12A4-205ENST00000570616 WWC1Q8IX03 1113 aa29.75■■■□□ 2.35
SLC12A4-205ENST00000570616 BCL2L12Q9HB09 334 aa29.75■■■□□ 2.35
SLC12A4-205ENST00000570616 MBIPQ9NS73 344 aa29.75■■■□□ 2.35
SLC12A4-205ENST00000570616 ERBB4Q15303 1308 aa29.74■■■□□ 2.35
SLC12A4-205ENST00000570616 CD2APQ9Y5K6 639 aa29.74■■■□□ 2.35
SLC12A4-205ENST00000570616 SCN7AQ01118 1682 aa29.72■■■□□ 2.35
SLC12A4-205ENST00000570616 SENP3-EIF4A1A0A087X0R7 540 aa29.72■■■□□ 2.35
SLC12A4-205ENST00000570616 DZIP3Q86Y13 1208 aaKnown RBP29.72■■■□□ 2.35
SLC12A4-205ENST00000570616 TBC1D2BQ9UPU7 963 aa29.72■■■□□ 2.35
SLC12A4-205ENST00000570616 PARP3Q9Y6F1 533 aa29.72■■■□□ 2.35
SLC12A4-205ENST00000570616 HOXB7P09629 217 aa29.71■■■□□ 2.35
SLC12A4-205ENST00000570616 CAMTA2O94983 1202 aa29.7■■■□□ 2.35
SLC12A4-205ENST00000570616 TM4SF1P30408 202 aa29.7■■■□□ 2.35
SLC12A4-205ENST00000570616 DDR1Q08345 913 aa29.7■■■□□ 2.35
SLC12A4-205ENST00000570616 KRT24Q2M2I5 525 aa29.7■■■□□ 2.35
SLC12A4-205ENST00000570616 NGEFQ8N5V2 710 aa29.7■■■□□ 2.35
SLC12A4-205ENST00000570616 IL16Q14005 1332 aa29.69■■■□□ 2.34
SLC12A4-205ENST00000570616 NFIXQ14938 502 aa29.68■■■□□ 2.34
SLC12A4-205ENST00000570616 NLGN2Q8NFZ4 835 aa29.68■■■□□ 2.34
SLC12A4-205ENST00000570616 POLRMTO00411 1230 aaKnown RBP29.67■■■□□ 2.34
SLC12A4-205ENST00000570616 EIF2S2P20042 333 aaKnown RBP29.67■■■□□ 2.34
SLC12A4-205ENST00000570616 C10orf71Q711Q0 1435 aa29.67■■■□□ 2.34
SLC12A4-205ENST00000570616 RGL2O15211 777 aa29.66■■■□□ 2.34
SLC12A4-205ENST00000570616 BCORQ6W2J9 1755 aa29.64■■■□□ 2.34
SLC12A4-205ENST00000570616 MYL6BP14649 208 aa29.64■■■□□ 2.34
SLC12A4-205ENST00000570616 PDIA6Q15084 440 aa29.64■■■□□ 2.34
SLC12A4-205ENST00000570616 DUSP27Q5VZP5 1158 aa29.64■■■□□ 2.34
SLC12A4-205ENST00000570616 WDR63Q8IWG1 891 aa29.64■■■□□ 2.34
SLC12A4-205ENST00000570616 SALL2Q9Y467 1007 aaPredicted RBP29.64■■■□□ 2.34
SLC12A4-205ENST00000570616 TBC1D9BQ66K14 1250 aa29.63■■■□□ 2.33
SLC12A4-205ENST00000570616 CLEC4GQ6UXB4 293 aa29.63■■■□□ 2.33
SLC12A4-205ENST00000570616 ZNF652Q9Y2D9 606 aa29.63■■■□□ 2.33
SLC12A4-205ENST00000570616 HDGFL1Q5TGJ6 251 aa29.62■■■□□ 2.33
SLC12A4-205ENST00000570616 LRP10Q7Z4F1 713 aa29.62■■■□□ 2.33
SLC12A4-205ENST00000570616 DCAF8L1A6NGE4 600 aa29.6■■■□□ 2.33
SLC12A4-205ENST00000570616 BICDL1Q6ZP65 573 aa29.6■■■□□ 2.33
SLC12A4-205ENST00000570616 NECTIN2Q92692 538 aa29.6■■■□□ 2.33
SLC12A4-205ENST00000570616 TSR2Q969E8 191 aaKnown RBP29.6■■■□□ 2.33
SLC12A4-205ENST00000570616 CARMIL3Q8ND23 1372 aa29.6■■■□□ 2.33
SLC12A4-205ENST00000570616 PROSER3Q2NL68 480 aa29.59■■■□□ 2.33
SLC12A4-205ENST00000570616 KIF6Q6ZMV9 814 aa29.59■■■□□ 2.33
SLC12A4-205ENST00000570616 MIER1Q8N108 512 aa29.59■■■□□ 2.33
SLC12A4-205ENST00000570616 DDX21Q9NR30 783 aaKnown RBP eCLIP29.59■■■□□ 2.33
SLC12A4-205ENST00000570616 KIF13BQ9NQT8 1826 aa29.59■■■□□ 2.33
SLC12A4-205ENST00000570616 ERVV-1B6SEH8 477 aa29.58■■■□□ 2.33
SLC12A4-205ENST00000570616 SERPINB2P05120 415 aa29.58■■■□□ 2.33
SLC12A4-205ENST00000570616 MAP3K15Q6ZN16 1313 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms