RNA–Protein interactions for RNA: ENST00000570136.5

PDPK1-217, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 2

Gene PDPK1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-217ENST00000570136 NEUROD2Q15784 382 aa19.63■□□□□ 0.73
PDPK1-217ENST00000570136 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
PDPK1-217ENST00000570136 DNAJC10Q8IXB1 793 aa19.63■□□□□ 0.73
PDPK1-217ENST00000570136 ZNF784Q8NCA9 323 aaPredicted RBP19.63■□□□□ 0.73
PDPK1-217ENST00000570136 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
PDPK1-217ENST00000570136 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
PDPK1-217ENST00000570136 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
PDPK1-217ENST00000570136 COL23A1Q86Y22 540 aaPredicted RBP19.62■□□□□ 0.73
PDPK1-217ENST00000570136 TRAPPC3LQ5T215 181 aa19.61■□□□□ 0.73
PDPK1-217ENST00000570136 THUMPD2Q9BTF0 503 aaKnown RBP19.61■□□□□ 0.73
PDPK1-217ENST00000570136 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
PDPK1-217ENST00000570136 C4AP0C0L4 1744 aa19.61■□□□□ 0.73
PDPK1-217ENST00000570136 MSH5O43196 834 aa19.6■□□□□ 0.73
PDPK1-217ENST00000570136 POLD1P28340 1107 aa19.59■□□□□ 0.73
PDPK1-217ENST00000570136 INTS5Q6P9B9 1019 aaKnown RBP19.59■□□□□ 0.73
PDPK1-217ENST00000570136 SOS1Q07889 1333 aaPredicted RBP19.58■□□□□ 0.73
PDPK1-217ENST00000570136 CHL1O00533 1208 aa19.58■□□□□ 0.72
PDPK1-217ENST00000570136 KCNQ3O43525 872 aa19.58■□□□□ 0.72
PDPK1-217ENST00000570136 PHF14O94880 888 aa19.58■□□□□ 0.72
PDPK1-217ENST00000570136 CFAP44Q96MT7 982 aa19.58■□□□□ 0.72
PDPK1-217ENST00000570136 RFC4P35249 363 aa19.57■□□□□ 0.72
PDPK1-217ENST00000570136 EIF4A1P60842 406 aaKnown RBP19.57■□□□□ 0.72
PDPK1-217ENST00000570136 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
PDPK1-217ENST00000570136 A0A087WZG4 1122 aa19.56■□□□□ 0.72
PDPK1-217ENST00000570136 GNAI1P63096 354 aa19.56■□□□□ 0.72
PDPK1-217ENST00000570136 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
PDPK1-217ENST00000570136 IFT57Q9NWB7 429 aa19.56■□□□□ 0.72
PDPK1-217ENST00000570136 COL15A1P39059 1388 aa19.56■□□□□ 0.72
PDPK1-217ENST00000570136 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
PDPK1-217ENST00000570136 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
PDPK1-217ENST00000570136 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
PDPK1-217ENST00000570136 ARHGEF1Q92888 912 aaKnown RBP19.55■□□□□ 0.72
PDPK1-217ENST00000570136 MIS18AQ9NYP9 233 aa19.55■□□□□ 0.72
PDPK1-217ENST00000570136 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
PDPK1-217ENST00000570136 IL16Q14005 1332 aa19.54■□□□□ 0.72
PDPK1-217ENST00000570136 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
PDPK1-217ENST00000570136 HOXB7P09629 217 aa19.54■□□□□ 0.72
PDPK1-217ENST00000570136 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
PDPK1-217ENST00000570136 NLGN1Q8N2Q7 840 aa19.54■□□□□ 0.72
PDPK1-217ENST00000570136 GOLGB1Q14789 3259 aaKnown RBP19.54■□□□□ 0.72
PDPK1-217ENST00000570136 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
PDPK1-217ENST00000570136 EIF5P55010 431 aaKnown RBP19.53■□□□□ 0.72
PDPK1-217ENST00000570136 GPR162Q16538 588 aa19.53■□□□□ 0.72
PDPK1-217ENST00000570136 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
PDPK1-217ENST00000570136 USP42Q9H9J4 1324 aaKnown RBP19.52■□□□□ 0.72
PDPK1-217ENST00000570136 ZPR1O75312 459 aa19.52■□□□□ 0.72
PDPK1-217ENST00000570136 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
PDPK1-217ENST00000570136 USP16Q9Y5T5 823 aa19.52■□□□□ 0.72
PDPK1-217ENST00000570136 RGL2O15211 777 aa19.51■□□□□ 0.71
PDPK1-217ENST00000570136 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
PDPK1-217ENST00000570136 NARFQ9UHQ1 456 aa19.51■□□□□ 0.71
PDPK1-217ENST00000570136 SCN7AQ01118 1682 aa19.51■□□□□ 0.71
PDPK1-217ENST00000570136 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
PDPK1-217ENST00000570136 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
PDPK1-217ENST00000570136 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
PDPK1-217ENST00000570136 A1BGP04217 495 aa19.48■□□□□ 0.71
PDPK1-217ENST00000570136 GYS1P13807 737 aa19.48■□□□□ 0.71
PDPK1-217ENST00000570136 NLGN2Q8NFZ4 835 aa19.48■□□□□ 0.71
PDPK1-217ENST00000570136 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
PDPK1-217ENST00000570136 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
PDPK1-217ENST00000570136 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
PDPK1-217ENST00000570136 MSL1Q68DK7 614 aa19.46■□□□□ 0.71
PDPK1-217ENST00000570136 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
PDPK1-217ENST00000570136 C1QTNF8P60827 252 aa19.45■□□□□ 0.7
PDPK1-217ENST00000570136 USPL1Q5W0Q7 1092 aa19.44■□□□□ 0.7
PDPK1-217ENST00000570136 MIER1Q8N108 512 aa19.44■□□□□ 0.7
PDPK1-217ENST00000570136 ZNF652Q9Y2D9 606 aa19.44■□□□□ 0.7
PDPK1-217ENST00000570136 ZNF330Q9Y3S2 320 aaPredicted RBP19.44■□□□□ 0.7
PDPK1-217ENST00000570136 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 MMP10P09238 476 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
PDPK1-217ENST00000570136 CLEC4GQ6UXB4 293 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
PDPK1-217ENST00000570136 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 SRP68Q9UHB9 627 aaKnown RBP19.43■□□□□ 0.7
PDPK1-217ENST00000570136 CD2APQ9Y5K6 639 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 PARP3Q9Y6F1 533 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
PDPK1-217ENST00000570136 CHD4Q14839 1912 aa19.42■□□□□ 0.7
PDPK1-217ENST00000570136 CACNA1FO60840 1977 aa19.42■□□□□ 0.7
PDPK1-217ENST00000570136 FKBP8Q14318 412 aa19.41■□□□□ 0.7
PDPK1-217ENST00000570136 HDGFL1Q5TGJ6 251 aa19.41■□□□□ 0.7
PDPK1-217ENST00000570136 DUSP27Q5VZP5 1158 aa19.41■□□□□ 0.7
PDPK1-217ENST00000570136 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
PDPK1-217ENST00000570136 YBX3P16989 372 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDPK1-217ENST00000570136 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
PDPK1-217ENST00000570136 DDX21Q9NR30 783 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDPK1-217ENST00000570136 DBF4Q9UBU7 674 aaPredicted RBP19.4■□□□□ 0.7
PDPK1-217ENST00000570136 ZNF521Q96K83 1311 aa19.4■□□□□ 0.7
PDPK1-217ENST00000570136 NRXN2Q9P2S2 1712 aa19.39■□□□□ 0.7
PDPK1-217ENST00000570136 ERVV-1B6SEH8 477 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 CAMTA2O94983 1202 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 TM4SF1P30408 202 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 NUP98P52948 1817 aa19.39■□□□□ 0.69
PDPK1-217ENST00000570136 GOLGA2Q08379 1002 aa19.38■□□□□ 0.69
PDPK1-217ENST00000570136 CARMIL3Q8ND23 1372 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms