RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
CNOT1-217ENST00000569263 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
CNOT1-217ENST00000569263 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
CNOT1-217ENST00000569263 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
CNOT1-217ENST00000569263 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
CNOT1-217ENST00000569263 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
CNOT1-217ENST00000569263 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
CNOT1-217ENST00000569263 RTCBQ9Y3I0 505 aaKnown RBP16.93■□□□□ 0.3
CNOT1-217ENST00000569263 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
CNOT1-217ENST00000569263 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
CNOT1-217ENST00000569263 PHF14O94880 888 aa16.92■□□□□ 0.3
CNOT1-217ENST00000569263 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
CNOT1-217ENST00000569263 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
CNOT1-217ENST00000569263 MSH5O43196 834 aa16.91■□□□□ 0.3
CNOT1-217ENST00000569263 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
CNOT1-217ENST00000569263 SSFA2P28290 1259 aa16.91■□□□□ 0.3
CNOT1-217ENST00000569263 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
CNOT1-217ENST00000569263 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
CNOT1-217ENST00000569263 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
CNOT1-217ENST00000569263 E9PSI1 815 aa16.9■□□□□ 0.3
CNOT1-217ENST00000569263 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
CNOT1-217ENST00000569263 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
CNOT1-217ENST00000569263 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
CNOT1-217ENST00000569263 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
CNOT1-217ENST00000569263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.89■□□□□ 0.29
CNOT1-217ENST00000569263 A1BGP04217 495 aa16.89■□□□□ 0.29
CNOT1-217ENST00000569263 HOXB7P09629 217 aa16.89■□□□□ 0.29
CNOT1-217ENST00000569263 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
CNOT1-217ENST00000569263 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.29
CNOT1-217ENST00000569263 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
CNOT1-217ENST00000569263 COL15A1P39059 1388 aa16.89■□□□□ 0.29
CNOT1-217ENST00000569263 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
CNOT1-217ENST00000569263 ADRA2BP18089 450 aa16.88■□□□□ 0.29
CNOT1-217ENST00000569263 TRAPPC3LQ5T215 181 aa16.88■□□□□ 0.29
CNOT1-217ENST00000569263 SMIM5Q71RC9 77 aa16.88■□□□□ 0.29
CNOT1-217ENST00000569263 AMIGO3Q86WK7 504 aa16.88■□□□□ 0.29
CNOT1-217ENST00000569263 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
CNOT1-217ENST00000569263 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
CNOT1-217ENST00000569263 IL6STP40189 918 aaPredicted RBP16.87■□□□□ 0.29
CNOT1-217ENST00000569263 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
CNOT1-217ENST00000569263 HDGFL1Q5TGJ6 251 aa16.87■□□□□ 0.29
CNOT1-217ENST00000569263 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
CNOT1-217ENST00000569263 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
CNOT1-217ENST00000569263 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
CNOT1-217ENST00000569263 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
CNOT1-217ENST00000569263 RFC4P35249 363 aa16.86■□□□□ 0.29
CNOT1-217ENST00000569263 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
CNOT1-217ENST00000569263 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
CNOT1-217ENST00000569263 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
CNOT1-217ENST00000569263 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
CNOT1-217ENST00000569263 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
CNOT1-217ENST00000569263 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
CNOT1-217ENST00000569263 ARXQ96QS3 562 aa16.85■□□□□ 0.29
CNOT1-217ENST00000569263 CHMP4AQ9BY43 222 aa16.85■□□□□ 0.29
CNOT1-217ENST00000569263 PDGFDQ9GZP0 370 aaPredicted RBP16.85■□□□□ 0.29
CNOT1-217ENST00000569263 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
CNOT1-217ENST00000569263 A0A087WZG4 1122 aa16.84■□□□□ 0.29
CNOT1-217ENST00000569263 MYL6BP14649 208 aa16.84■□□□□ 0.29
CNOT1-217ENST00000569263 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
CNOT1-217ENST00000569263 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
CNOT1-217ENST00000569263 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
CNOT1-217ENST00000569263 NBPF26B4DH59 902 aa16.83■□□□□ 0.28
CNOT1-217ENST00000569263 ZBTB7AO95365 584 aa16.83■□□□□ 0.28
CNOT1-217ENST00000569263 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.28
CNOT1-217ENST00000569263 NBPF15Q8N660 670 aa16.83■□□□□ 0.28
CNOT1-217ENST00000569263 ZPR1O75312 459 aa16.82■□□□□ 0.28
CNOT1-217ENST00000569263 CCDC30Q5VVM6 783 aa16.82■□□□□ 0.28
CNOT1-217ENST00000569263 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
CNOT1-217ENST00000569263 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
CNOT1-217ENST00000569263 DBF4Q9UBU7 674 aaPredicted RBP16.82■□□□□ 0.28
CNOT1-217ENST00000569263 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
CNOT1-217ENST00000569263 CACNA1FO60840 1977 aa16.81■□□□□ 0.28
CNOT1-217ENST00000569263 DZIP3Q86Y13 1208 aaKnown RBP16.81■□□□□ 0.28
CNOT1-217ENST00000569263 STK31Q9BXU1 1019 aa16.81■□□□□ 0.28
CNOT1-217ENST00000569263 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
CNOT1-217ENST00000569263 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
CNOT1-217ENST00000569263 COL24A1Q17RW2 1714 aa16.8■□□□□ 0.28
CNOT1-217ENST00000569263 ANXA1P04083 346 aa16.8■□□□□ 0.28
CNOT1-217ENST00000569263 MSL1Q68DK7 614 aa16.8■□□□□ 0.28
CNOT1-217ENST00000569263 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
CNOT1-217ENST00000569263 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
CNOT1-217ENST00000569263 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
CNOT1-217ENST00000569263 PDIA6Q15084 440 aa16.79■□□□□ 0.28
CNOT1-217ENST00000569263 PROSER3Q2NL68 480 aa16.79■□□□□ 0.28
CNOT1-217ENST00000569263 KIF6Q6ZMV9 814 aa16.79■□□□□ 0.28
CNOT1-217ENST00000569263 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
CNOT1-217ENST00000569263 SPON1Q9HCB6 807 aa16.79■□□□□ 0.28
CNOT1-217ENST00000569263 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
CNOT1-217ENST00000569263 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
CNOT1-217ENST00000569263 LRP5O75197 1615 aa16.78■□□□□ 0.28
CNOT1-217ENST00000569263 USPL1Q5W0Q7 1092 aa16.78■□□□□ 0.28
CNOT1-217ENST00000569263 NUP98P52948 1817 aa16.77■□□□□ 0.28
CNOT1-217ENST00000569263 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.28
CNOT1-217ENST00000569263 VAMP4O75379 141 aa16.77■□□□□ 0.28
CNOT1-217ENST00000569263 GYS1P13807 737 aa16.77■□□□□ 0.28
CNOT1-217ENST00000569263 POLD1P28340 1107 aa16.77■□□□□ 0.28
CNOT1-217ENST00000569263 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
CNOT1-217ENST00000569263 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
CNOT1-217ENST00000569263 TTLL7Q6ZT98 887 aa16.76■□□□□ 0.27
CNOT1-217ENST00000569263 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms