RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 INTS5Q6P9B9 1019 aaKnown RBP34.09■■■■□ 3.05
NME3-209ENST00000566600 MYH14Q7Z406 1995 aaKnown RBP34.09■■■■□ 3.05
NME3-209ENST00000566600 PHF14O94880 888 aa34.08■■■■□ 3.05
NME3-209ENST00000566600 GNAI1P63096 354 aa34.08■■■■□ 3.05
NME3-209ENST00000566600 WWC1Q8IX03 1113 aa34.08■■■■□ 3.05
NME3-209ENST00000566600 IFT57Q9NWB7 429 aa34.08■■■■□ 3.05
NME3-209ENST00000566600 TRAPPC3LQ5T215 181 aa34.07■■■■□ 3.04
NME3-209ENST00000566600 MTFR1LQ9H019 292 aa34.07■■■■□ 3.04
NME3-209ENST00000566600 SPON1Q9HCB6 807 aa34.06■■■■□ 3.04
NME3-209ENST00000566600 SENP3-EIF4A1A0A087X0R7 540 aa34.05■■■■□ 3.04
NME3-209ENST00000566600 AMIGO3Q86WK7 504 aa34.05■■■■□ 3.04
NME3-209ENST00000566600 GIGYF1O75420 1035 aaPredicted RBP34.04■■■■□ 3.04
NME3-209ENST00000566600 ZBTB7AO95365 584 aa34.04■■■■□ 3.04
NME3-209ENST00000566600 ZNF853P0CG23 659 aa34.04■■■■□ 3.04
NME3-209ENST00000566600 USP16Q9Y5T5 823 aa34.03■■■■□ 3.04
NME3-209ENST00000566600 ZBTB1Q9Y2K1 713 aa34.02■■■■□ 3.04
NME3-209ENST00000566600 SALL2Q9Y467 1007 aaPredicted RBP34.02■■■■□ 3.04
NME3-209ENST00000566600 IL16Q14005 1332 aa34.01■■■■□ 3.03
NME3-209ENST00000566600 LRP5O75197 1615 aa34.01■■■■□ 3.03
NME3-209ENST00000566600 PRAMEF22A3QJZ6 481 aa34■■■■□ 3.03
NME3-209ENST00000566600 SMIM5Q71RC9 77 aa34■■■■□ 3.03
NME3-209ENST00000566600 WDR63Q8IWG1 891 aa34■■■■□ 3.03
NME3-209ENST00000566600 SOS1Q07889 1333 aaPredicted RBP34■■■■□ 3.03
NME3-209ENST00000566600 LAMB4A4D0S4 1761 aa33.99■■■■□ 3.03
NME3-209ENST00000566600 CANXP27824 592 aaKnown RBP33.99■■■■□ 3.03
NME3-209ENST00000566600 RFC4P35249 363 aa33.99■■■■□ 3.03
NME3-209ENST00000566600 ARHGEF1Q92888 912 aaKnown RBP33.99■■■■□ 3.03
NME3-209ENST00000566600 MBIPQ9NS73 344 aa33.99■■■■□ 3.03
NME3-209ENST00000566600 ATF5Q9Y2D1 282 aaPredicted RBP33.98■■■■□ 3.03
NME3-209ENST00000566600 A1BGP04217 495 aa33.96■■■■□ 3.03
NME3-209ENST00000566600 IL6STP40189 918 aaPredicted RBP33.96■■■■□ 3.03
NME3-209ENST00000566600 NPM2Q86SE8 214 aaKnown RBP33.96■■■■□ 3.03
NME3-209ENST00000566600 A0A087WZG4 1122 aa33.95■■■■□ 3.03
NME3-209ENST00000566600 COL15A1P39059 1388 aa33.95■■■■□ 3.02
NME3-209ENST00000566600 EIF5P55010 431 aaKnown RBP33.94■■■■□ 3.02
NME3-209ENST00000566600 HOXB7P09629 217 aa33.92■■■■□ 3.02
NME3-209ENST00000566600 POLD1P28340 1107 aa33.92■■■■□ 3.02
NME3-209ENST00000566600 C4AP0C0L4 1744 aa33.92■■■■□ 3.02
NME3-209ENST00000566600 COL24A1Q17RW2 1714 aa33.9■■■■□ 3.02
NME3-209ENST00000566600 ERBB4Q15303 1308 aa33.9■■■■□ 3.02
NME3-209ENST00000566600 ZPR1O75312 459 aa33.9■■■■□ 3.02
NME3-209ENST00000566600 PTGER2P43116 358 aa33.9■■■■□ 3.02
NME3-209ENST00000566600 USP42Q9H9J4 1324 aaKnown RBP33.89■■■■□ 3.02
NME3-209ENST00000566600 NLGN1Q8N2Q7 840 aa33.89■■■■□ 3.02
NME3-209ENST00000566600 ZNF330Q9Y3S2 320 aaPredicted RBP33.89■■■■□ 3.02
NME3-209ENST00000566600 MSL1Q68DK7 614 aa33.88■■■■□ 3.01
NME3-209ENST00000566600 SGIP1Q9BQI5 828 aa33.88■■■■□ 3.01
NME3-209ENST00000566600 NARFQ9UHQ1 456 aa33.88■■■■□ 3.01
NME3-209ENST00000566600 PPP1R1BQ9UD71 204 aaPredicted RBP33.87■■■■□ 3.01
NME3-209ENST00000566600 ZNF521Q96K83 1311 aa33.86■■■■□ 3.01
NME3-209ENST00000566600 NBPF26B4DH59 902 aa33.86■■■■□ 3.01
NME3-209ENST00000566600 EIF2S2P20042 333 aaKnown RBP33.86■■■■□ 3.01
NME3-209ENST00000566600 KRT24Q2M2I5 525 aa33.86■■■■□ 3.01
NME3-209ENST00000566600 DUSP27Q5VZP5 1158 aa33.86■■■■□ 3.01
NME3-209ENST00000566600 NBPF10Q6P3W6 841 aaKnown RBP33.86■■■■□ 3.01
NME3-209ENST00000566600 NBPF15Q8N660 670 aa33.86■■■■□ 3.01
NME3-209ENST00000566600 GYS1P13807 737 aa33.85■■■■□ 3.01
NME3-209ENST00000566600 TSR2Q969E8 191 aaKnown RBP33.85■■■■□ 3.01
NME3-209ENST00000566600 CHMP4AQ9BY43 222 aa33.85■■■■□ 3.01
NME3-209ENST00000566600 PIP4K2AP48426 406 aaPredicted RBP33.84■■■■□ 3.01
NME3-209ENST00000566600 MYH16Q9H6N6 1097 aa33.84■■■■□ 3.01
NME3-209ENST00000566600 SRP68Q9UHB9 627 aaKnown RBP33.84■■■■□ 3.01
NME3-209ENST00000566600 USPL1Q5W0Q7 1092 aa33.82■■■■□ 3
NME3-209ENST00000566600 ARXQ96QS3 562 aa33.82■■■■□ 3
NME3-209ENST00000566600 GOLGA2Q08379 1002 aa33.81■■■■□ 3
NME3-209ENST00000566600 HDGFL1Q5TGJ6 251 aa33.81■■■■□ 3
NME3-209ENST00000566600 FANCIQ9NVI1 1328 aa33.8■■■■□ 3
NME3-209ENST00000566600 DZIP3Q86Y13 1208 aaKnown RBP33.8■■■■□ 3
NME3-209ENST00000566600 TBC1D2BQ9UPU7 963 aa33.8■■■■□ 3
NME3-209ENST00000566600 SRCAPQ6ZRS2 3230 aa33.79■■■■□ 3
NME3-209ENST00000566600 C8orf58Q8NAV2 365 aa33.79■■■■□ 3
NME3-209ENST00000566600 MYL6BP14649 208 aa33.78■■■■□ 3
NME3-209ENST00000566600 ELL2O00472 640 aaPredicted RBP33.77■■■■□ 3
NME3-209ENST00000566600 FKBP8Q14318 412 aa33.77■■■■□ 3
NME3-209ENST00000566600 NECTIN2Q92692 538 aa33.77■■■■□ 3
NME3-209ENST00000566600 RGL2O15211 777 aa33.75■■■□□ 2.99
NME3-209ENST00000566600 MMP10P09238 476 aa33.75■■■□□ 2.99
NME3-209ENST00000566600 PDIA6Q15084 440 aa33.75■■■□□ 2.99
NME3-209ENST00000566600 SPINK5Q9NQ38 1064 aaPredicted RBP33.75■■■□□ 2.99
NME3-209ENST00000566600 DDX21Q9NR30 783 aaKnown RBP eCLIP33.75■■■□□ 2.99
NME3-209ENST00000566600 DBF4Q9UBU7 674 aaPredicted RBP33.75■■■□□ 2.99
NME3-209ENST00000566600 SCN7AQ01118 1682 aa33.74■■■□□ 2.99
NME3-209ENST00000566600 E9PSI1 815 aa33.74■■■□□ 2.99
NME3-209ENST00000566600 CAMTA2O94983 1202 aa33.73■■■□□ 2.99
NME3-209ENST00000566600 TWISTNBQ3B726 338 aaPredicted RBP33.73■■■□□ 2.99
NME3-209ENST00000566600 KIF6Q6ZMV9 814 aa33.73■■■□□ 2.99
NME3-209ENST00000566600 BCL2L12Q9HB09 334 aa33.73■■■□□ 2.99
NME3-209ENST00000566600 ZNF652Q9Y2D9 606 aa33.73■■■□□ 2.99
NME3-209ENST00000566600 TSPYL6Q8N831 410 aa33.72■■■□□ 2.99
NME3-209ENST00000566600 CHPF2Q9P2E5 772 aa33.72■■■□□ 2.99
NME3-209ENST00000566600 PARP3Q9Y6F1 533 aa33.72■■■□□ 2.99
NME3-209ENST00000566600 CCDC30Q5VVM6 783 aa33.71■■■□□ 2.99
NME3-209ENST00000566600 CLEC4GQ6UXB4 293 aa33.71■■■□□ 2.99
NME3-209ENST00000566600 BCORQ6W2J9 1755 aa33.7■■■□□ 2.99
NME3-209ENST00000566600 TM4SF1P30408 202 aa33.7■■■□□ 2.99
NME3-209ENST00000566600 PROSER3Q2NL68 480 aa33.7■■■□□ 2.99
NME3-209ENST00000566600 HNRNPUQ00839 825 aaKnown RBP eCLIP33.69■■■□□ 2.98
NME3-209ENST00000566600 EXOSC9Q06265 439 aaKnown RBP33.69■■■□□ 2.98
NME3-209ENST00000566600 LRP10Q7Z4F1 713 aa33.69■■■□□ 2.98
NME3-209ENST00000566600 HYPKQ9NX55 129 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms