RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CCDC87Q9NVE4 849 aa27.55■■■□□ 2
SHCBP1-205ENST00000566016 CHL1O00533 1208 aa27.54■■■□□ 2
SHCBP1-205ENST00000566016 INTS5Q6P9B9 1019 aaKnown RBP27.54■■■□□ 2
SHCBP1-205ENST00000566016 MIER1Q8N108 512 aa27.54■■■□□ 2
SHCBP1-205ENST00000566016 MTFR1LQ9H019 292 aa27.54■■■□□ 2
SHCBP1-205ENST00000566016 EIF4A1P60842 406 aaKnown RBP27.53■■■□□ 2
SHCBP1-205ENST00000566016 CFAP44Q96MT7 982 aa27.53■■■□□ 2
SHCBP1-205ENST00000566016 SPON1Q9HCB6 807 aa27.52■■■□□ 2
SHCBP1-205ENST00000566016 ZNF853P0CG23 659 aa27.51■■□□□ 1.99
SHCBP1-205ENST00000566016 WWC1Q8IX03 1113 aa27.51■■□□□ 1.99
SHCBP1-205ENST00000566016 IFT57Q9NWB7 429 aa27.51■■□□□ 1.99
SHCBP1-205ENST00000566016 PHF14O94880 888 aa27.5■■□□□ 1.99
SHCBP1-205ENST00000566016 SOS1Q07889 1333 aaPredicted RBP27.49■■□□□ 1.99
SHCBP1-205ENST00000566016 GIGYF1O75420 1035 aaPredicted RBP27.49■■□□□ 1.99
SHCBP1-205ENST00000566016 ZBTB7AO95365 584 aa27.49■■□□□ 1.99
SHCBP1-205ENST00000566016 ZBTB1Q9Y2K1 713 aa27.49■■□□□ 1.99
SHCBP1-205ENST00000566016 TRAPPC3LQ5T215 181 aa27.48■■□□□ 1.99
SHCBP1-205ENST00000566016 IL16Q14005 1332 aa27.47■■□□□ 1.99
SHCBP1-205ENST00000566016 GNAI1P63096 354 aa27.47■■□□□ 1.99
SHCBP1-205ENST00000566016 MSH5O43196 834 aa27.46■■□□□ 1.99
SHCBP1-205ENST00000566016 USP16Q9Y5T5 823 aa27.46■■□□□ 1.99
SHCBP1-205ENST00000566016 PRAMEF22A3QJZ6 481 aa27.45■■□□□ 1.99
SHCBP1-205ENST00000566016 SGIP1Q9BQI5 828 aa27.45■■□□□ 1.99
SHCBP1-205ENST00000566016 COL15A1P39059 1388 aa27.45■■□□□ 1.99
SHCBP1-205ENST00000566016 PTGER2P43116 358 aa27.44■■□□□ 1.98
SHCBP1-205ENST00000566016 SMIM5Q71RC9 77 aa27.44■■□□□ 1.98
SHCBP1-205ENST00000566016 ARHGEF1Q92888 912 aaKnown RBP27.44■■□□□ 1.98
SHCBP1-205ENST00000566016 LAS1LQ9Y4W2 734 aaKnown RBP27.44■■□□□ 1.98
SHCBP1-205ENST00000566016 MBIPQ9NS73 344 aa27.44■■□□□ 1.98
SHCBP1-205ENST00000566016 IL6STP40189 918 aaPredicted RBP27.43■■□□□ 1.98
SHCBP1-205ENST00000566016 EIF5P55010 431 aaKnown RBP27.43■■□□□ 1.98
SHCBP1-205ENST00000566016 RFC4P35249 363 aa27.42■■□□□ 1.98
SHCBP1-205ENST00000566016 WDR63Q8IWG1 891 aa27.42■■□□□ 1.98
SHCBP1-205ENST00000566016 ATF5Q9Y2D1 282 aaPredicted RBP27.42■■□□□ 1.98
SHCBP1-205ENST00000566016 SCN7AQ01118 1682 aa27.42■■□□□ 1.98
SHCBP1-205ENST00000566016 HOXB7P09629 217 aa27.41■■□□□ 1.98
SHCBP1-205ENST00000566016 USP42Q9H9J4 1324 aaKnown RBP27.41■■□□□ 1.98
SHCBP1-205ENST00000566016 A1BGP04217 495 aa27.4■■□□□ 1.98
SHCBP1-205ENST00000566016 CANXP27824 592 aaKnown RBP27.4■■□□□ 1.98
SHCBP1-205ENST00000566016 ERBB4Q15303 1308 aa27.4■■□□□ 1.98
SHCBP1-205ENST00000566016 BCORQ6W2J9 1755 aa27.39■■□□□ 1.98
SHCBP1-205ENST00000566016 SENP3-EIF4A1A0A087X0R7 540 aa27.39■■□□□ 1.98
SHCBP1-205ENST00000566016 ZNF521Q96K83 1311 aa27.38■■□□□ 1.97
SHCBP1-205ENST00000566016 A0A087WZG4 1122 aa27.38■■□□□ 1.97
SHCBP1-205ENST00000566016 POLD1P28340 1107 aa27.37■■□□□ 1.97
SHCBP1-205ENST00000566016 GYS1P13807 737 aa27.36■■□□□ 1.97
SHCBP1-205ENST00000566016 NLGN1Q8N2Q7 840 aa27.36■■□□□ 1.97
SHCBP1-205ENST00000566016 NARFQ9UHQ1 456 aa27.36■■□□□ 1.97
SHCBP1-205ENST00000566016 SALL2Q9Y467 1007 aaPredicted RBP27.36■■□□□ 1.97
SHCBP1-205ENST00000566016 NBPF26B4DH59 902 aa27.35■■□□□ 1.97
SHCBP1-205ENST00000566016 MSL1Q68DK7 614 aa27.35■■□□□ 1.97
SHCBP1-205ENST00000566016 NBPF10Q6P3W6 841 aaKnown RBP27.35■■□□□ 1.97
SHCBP1-205ENST00000566016 NBPF15Q8N660 670 aa27.35■■□□□ 1.97
SHCBP1-205ENST00000566016 ZPR1O75312 459 aa27.34■■□□□ 1.97
SHCBP1-205ENST00000566016 KRT24Q2M2I5 525 aa27.34■■□□□ 1.97
SHCBP1-205ENST00000566016 NPM2Q86SE8 214 aaKnown RBP27.34■■□□□ 1.97
SHCBP1-205ENST00000566016 SRP68Q9UHB9 627 aaKnown RBP27.32■■□□□ 1.96
SHCBP1-205ENST00000566016 ARXQ96QS3 562 aa27.32■■□□□ 1.96
SHCBP1-205ENST00000566016 PPP1R1BQ9UD71 204 aaPredicted RBP27.32■■□□□ 1.96
SHCBP1-205ENST00000566016 DUSP27Q5VZP5 1158 aa27.31■■□□□ 1.96
SHCBP1-205ENST00000566016 FANCIQ9NVI1 1328 aa27.3■■□□□ 1.96
SHCBP1-205ENST00000566016 RGL2O15211 777 aa27.3■■□□□ 1.96
SHCBP1-205ENST00000566016 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
SHCBP1-205ENST00000566016 USPL1Q5W0Q7 1092 aa27.3■■□□□ 1.96
SHCBP1-205ENST00000566016 TSR2Q969E8 191 aaKnown RBP27.3■■□□□ 1.96
SHCBP1-205ENST00000566016 ZNF330Q9Y3S2 320 aaPredicted RBP27.3■■□□□ 1.96
SHCBP1-205ENST00000566016 EIF2S2P20042 333 aaKnown RBP27.28■■□□□ 1.96
SHCBP1-205ENST00000566016 DZIP3Q86Y13 1208 aaKnown RBP27.28■■□□□ 1.96
SHCBP1-205ENST00000566016 CHMP4AQ9BY43 222 aa27.28■■□□□ 1.96
SHCBP1-205ENST00000566016 MYH16Q9H6N6 1097 aa27.28■■□□□ 1.96
SHCBP1-205ENST00000566016 KIF13BQ9NQT8 1826 aa27.27■■□□□ 1.96
SHCBP1-205ENST00000566016 FKBP8Q14318 412 aa27.27■■□□□ 1.96
SHCBP1-205ENST00000566016 PDIA6Q15084 440 aa27.27■■□□□ 1.96
SHCBP1-205ENST00000566016 HDGFL1Q5TGJ6 251 aa27.27■■□□□ 1.96
SHCBP1-205ENST00000566016 CACNA1FO60840 1977 aa27.27■■□□□ 1.96
SHCBP1-205ENST00000566016 CAMTA2O94983 1202 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 MMP10P09238 476 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 LRP10Q7Z4F1 713 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 C8orf58Q8NAV2 365 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 BCL2L12Q9HB09 334 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 TBC1D2BQ9UPU7 963 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 NUP98P52948 1817 aa27.26■■□□□ 1.95
SHCBP1-205ENST00000566016 DDX21Q9NR30 783 aaKnown RBP eCLIP27.25■■□□□ 1.95
SHCBP1-205ENST00000566016 NRXN2Q9P2S2 1712 aa27.25■■□□□ 1.95
SHCBP1-205ENST00000566016 SPINK5Q9NQ38 1064 aaPredicted RBP27.25■■□□□ 1.95
SHCBP1-205ENST00000566016 GOLGA2Q08379 1002 aa27.24■■□□□ 1.95
SHCBP1-205ENST00000566016 CLEC4GQ6UXB4 293 aa27.24■■□□□ 1.95
SHCBP1-205ENST00000566016 DBF4Q9UBU7 674 aaPredicted RBP27.24■■□□□ 1.95
SHCBP1-205ENST00000566016 AFDNP55196 1824 aaKnown RBP27.24■■□□□ 1.95
SHCBP1-205ENST00000566016 MYL6BP14649 208 aa27.23■■□□□ 1.95
SHCBP1-205ENST00000566016 TM4SF1P30408 202 aa27.22■■□□□ 1.95
SHCBP1-205ENST00000566016 CHPF2Q9P2E5 772 aa27.22■■□□□ 1.95
SHCBP1-205ENST00000566016 ZNF652Q9Y2D9 606 aa27.22■■□□□ 1.95
SHCBP1-205ENST00000566016 E9PSI1 815 aa27.21■■□□□ 1.95
SHCBP1-205ENST00000566016 PROSER3Q2NL68 480 aa27.21■■□□□ 1.95
SHCBP1-205ENST00000566016 TSPYL6Q8N831 410 aa27.21■■□□□ 1.95
SHCBP1-205ENST00000566016 FHDC1Q9C0D6 1143 aaPredicted RBP27.21■■□□□ 1.95
SHCBP1-205ENST00000566016 ERVV-1B6SEH8 477 aa27.2■■□□□ 1.95
SHCBP1-205ENST00000566016 ELL2O00472 640 aaPredicted RBP27.2■■□□□ 1.95
SHCBP1-205ENST00000566016 TWISTNBQ3B726 338 aaPredicted RBP27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms