RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 C4AP0C0L4 1744 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 CHL1O00533 1208 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 ZNF853P0CG23 659 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 PTGER2P43116 358 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-206ENST00000563900 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
NSMCE1-206ENST00000563900 ZBTB7AO95365 584 aa11.56□□□□□ -0.56
NSMCE1-206ENST00000563900 SPON1Q9HCB6 807 aa11.56□□□□□ -0.56
NSMCE1-206ENST00000563900 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
NSMCE1-206ENST00000563900 RTCBQ9Y3I0 505 aaKnown RBP11.56□□□□□ -0.56
NSMCE1-206ENST00000563900 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 PHF14O94880 888 aa11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 STARD3NLO95772 234 aa11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 TSPYL4Q9UJ04 414 aa11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 USP16Q9Y5T5 823 aa11.55□□□□□ -0.56
NSMCE1-206ENST00000563900 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
NSMCE1-206ENST00000563900 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
NSMCE1-206ENST00000563900 MIER1Q8N108 512 aa11.54□□□□□ -0.56
NSMCE1-206ENST00000563900 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
NSMCE1-206ENST00000563900 IFT57Q9NWB7 429 aa11.54□□□□□ -0.56
NSMCE1-206ENST00000563900 COL15A1P39059 1388 aa11.54□□□□□ -0.56
NSMCE1-206ENST00000563900 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
NSMCE1-206ENST00000563900 TRAPPC3LQ5T215 181 aa11.53□□□□□ -0.56
NSMCE1-206ENST00000563900 NGEFQ8N5V2 710 aa11.53□□□□□ -0.56
NSMCE1-206ENST00000563900 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
NSMCE1-206ENST00000563900 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
NSMCE1-206ENST00000563900 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
NSMCE1-206ENST00000563900 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 A1BGP04217 495 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 GYS1P13807 737 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 IL6STP40189 918 aaPredicted RBP11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 IL16Q14005 1332 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 SCN7AQ01118 1682 aa11.52□□□□□ -0.57
NSMCE1-206ENST00000563900 GNAI1P63096 354 aa11.51□□□□□ -0.57
NSMCE1-206ENST00000563900 BCORQ6W2J9 1755 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 SENP3-EIF4A1A0A087X0R7 540 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 MSH5O43196 834 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 HOXB7P09629 217 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 CANXP27824 592 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 KRT24Q2M2I5 525 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 MSL1Q68DK7 614 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 LRP10Q7Z4F1 713 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 SRP68Q9UHB9 627 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 ERBB4Q15303 1308 aa11.5□□□□□ -0.57
NSMCE1-206ENST00000563900 RFC4P35249 363 aa11.49□□□□□ -0.57
NSMCE1-206ENST00000563900 PDIA6Q15084 440 aa11.49□□□□□ -0.57
NSMCE1-206ENST00000563900 WDR63Q8IWG1 891 aa11.49□□□□□ -0.57
NSMCE1-206ENST00000563900 ARXQ96QS3 562 aa11.49□□□□□ -0.57
NSMCE1-206ENST00000563900 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
NSMCE1-206ENST00000563900 A0A087WZG4 1122 aa11.48□□□□□ -0.57
NSMCE1-206ENST00000563900 RGL2O15211 777 aa11.48□□□□□ -0.57
NSMCE1-206ENST00000563900 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
NSMCE1-206ENST00000563900 USPL1Q5W0Q7 1092 aa11.48□□□□□ -0.57
NSMCE1-206ENST00000563900 NLGN1Q8N2Q7 840 aa11.48□□□□□ -0.57
NSMCE1-206ENST00000563900 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
NSMCE1-206ENST00000563900 POLD1P28340 1107 aa11.47□□□□□ -0.57
NSMCE1-206ENST00000563900 FKBP8Q14318 412 aa11.47□□□□□ -0.57
NSMCE1-206ENST00000563900 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
NSMCE1-206ENST00000563900 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.57
NSMCE1-206ENST00000563900 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.57
NSMCE1-206ENST00000563900 MMP10P09238 476 aa11.46□□□□□ -0.57
NSMCE1-206ENST00000563900 TM4SF1P30408 202 aa11.46□□□□□ -0.57
NSMCE1-206ENST00000563900 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
NSMCE1-206ENST00000563900 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.57
NSMCE1-206ENST00000563900 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
NSMCE1-206ENST00000563900 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 ZPR1O75312 459 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 DDR1Q08345 913 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 TSPYL6Q8N831 410 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 C8orf58Q8NAV2 365 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
NSMCE1-206ENST00000563900 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 NFIXQ14938 502 aa11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 HDGFL1Q5TGJ6 251 aa11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
NSMCE1-206ENST00000563900 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
NSMCE1-206ENST00000563900 TTLL7Q6ZT98 887 aa11.43□□□□□ -0.58
NSMCE1-206ENST00000563900 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms