RNA–Protein interactions for RNA: ENST00000562506.1

AP003071.3-201, humanhuman

TSL 3 BASIC

Gene AP003071.3, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.3-201ENST00000562506 TRIM35Q9UPQ4 493 aa28.1■■■□□ 2.09
AP003071.3-201ENST00000562506 POLD1P28340 1107 aa28.09■■■□□ 2.09
AP003071.3-201ENST00000562506 ARHGEF1Q92888 912 aaKnown RBP28.07■■■□□ 2.08
AP003071.3-201ENST00000562506 BABAM1Q9NWV8 329 aa28.07■■■□□ 2.08
AP003071.3-201ENST00000562506 SNRPA1P09661 255 aaKnown RBP28.06■■■□□ 2.08
AP003071.3-201ENST00000562506 MSL1Q68DK7 614 aa28.06■■■□□ 2.08
AP003071.3-201ENST00000562506 ZBTB1Q9Y2K1 713 aa28.06■■■□□ 2.08
AP003071.3-201ENST00000562506 C4AP0C0L4 1744 aa28.06■■■□□ 2.08
AP003071.3-201ENST00000562506 RFC4P35249 363 aa28.05■■■□□ 2.08
AP003071.3-201ENST00000562506 SOS1Q07889 1333 aaPredicted RBP28.05■■■□□ 2.08
AP003071.3-201ENST00000562506 ARXQ96QS3 562 aa28.05■■■□□ 2.08
AP003071.3-201ENST00000562506 TSPYL4Q9UJ04 414 aa28.04■■■□□ 2.08
AP003071.3-201ENST00000562506 EIF4A1P60842 406 aaKnown RBP28.02■■■□□ 2.08
AP003071.3-201ENST00000562506 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.07
AP003071.3-201ENST00000562506 USP16Q9Y5T5 823 aa28.01■■■□□ 2.07
AP003071.3-201ENST00000562506 PRAMEF22A3QJZ6 481 aa28■■■□□ 2.07
AP003071.3-201ENST00000562506 COL15A1P39059 1388 aa27.99■■■□□ 2.07
AP003071.3-201ENST00000562506 LAMB4A4D0S4 1761 aa27.99■■■□□ 2.07
AP003071.3-201ENST00000562506 USP42Q9H9J4 1324 aaKnown RBP27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 CHL1O00533 1208 aa27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 GIGYF1O75420 1035 aaPredicted RBP27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 A1BGP04217 495 aa27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 EIF5P55010 431 aaKnown RBP27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 CALD1Q05682 793 aaKnown RBP27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 NLGN1Q8N2Q7 840 aa27.98■■■□□ 2.07
AP003071.3-201ENST00000562506 GYS1P13807 737 aa27.97■■■□□ 2.07
AP003071.3-201ENST00000562506 IL6STP40189 918 aaPredicted RBP27.97■■■□□ 2.07
AP003071.3-201ENST00000562506 FAM9BQ8IZU0 186 aa27.97■■■□□ 2.07
AP003071.3-201ENST00000562506 A0A087WZG4 1122 aa27.96■■■□□ 2.07
AP003071.3-201ENST00000562506 LAS1LQ9Y4W2 734 aaKnown RBP27.96■■■□□ 2.07
AP003071.3-201ENST00000562506 ZPR1O75312 459 aa27.95■■■□□ 2.06
AP003071.3-201ENST00000562506 NCBP3Q53F19 620 aaKnown RBP27.95■■■□□ 2.06
AP003071.3-201ENST00000562506 FHDC1Q9C0D6 1143 aaPredicted RBP27.95■■■□□ 2.06
AP003071.3-201ENST00000562506 SRP68Q9UHB9 627 aaKnown RBP27.95■■■□□ 2.06
AP003071.3-201ENST00000562506 CCDC27Q2M243 656 aa27.94■■■□□ 2.06
AP003071.3-201ENST00000562506 CFAP44Q96MT7 982 aa27.94■■■□□ 2.06
AP003071.3-201ENST00000562506 NARFQ9UHQ1 456 aa27.94■■■□□ 2.06
AP003071.3-201ENST00000562506 DIEXFQ68CQ4 756 aaKnown RBP27.93■■■□□ 2.06
AP003071.3-201ENST00000562506 NPM2Q86SE8 214 aaKnown RBP27.93■■■□□ 2.06
AP003071.3-201ENST00000562506 CCER2I3L3R5 266 aa27.92■■■□□ 2.06
AP003071.3-201ENST00000562506 MMP10P09238 476 aa27.92■■■□□ 2.06
AP003071.3-201ENST00000562506 USPL1Q5W0Q7 1092 aa27.92■■■□□ 2.06
AP003071.3-201ENST00000562506 ZNF330Q9Y3S2 320 aaPredicted RBP27.92■■■□□ 2.06
AP003071.3-201ENST00000562506 SYT17Q9BSW7 474 aa27.91■■■□□ 2.06
AP003071.3-201ENST00000562506 IFT57Q9NWB7 429 aa27.91■■■□□ 2.06
AP003071.3-201ENST00000562506 ZNF853P0CG23 659 aa27.9■■■□□ 2.06
AP003071.3-201ENST00000562506 GNAI1P63096 354 aa27.9■■■□□ 2.06
AP003071.3-201ENST00000562506 PIP4K2AP48426 406 aaPredicted RBP27.89■■■□□ 2.06
AP003071.3-201ENST00000562506 FKBP8Q14318 412 aa27.89■■■□□ 2.06
AP003071.3-201ENST00000562506 KLHL34Q8N239 644 aa27.89■■■□□ 2.06
AP003071.3-201ENST00000562506 SENP3-EIF4A1A0A087X0R7 540 aa27.88■■■□□ 2.05
AP003071.3-201ENST00000562506 NBPF26B4DH59 902 aa27.88■■■□□ 2.05
AP003071.3-201ENST00000562506 NBPF10Q6P3W6 841 aaKnown RBP27.88■■■□□ 2.05
AP003071.3-201ENST00000562506 WWC1Q8IX03 1113 aa27.88■■■□□ 2.05
AP003071.3-201ENST00000562506 NBPF15Q8N660 670 aa27.88■■■□□ 2.05
AP003071.3-201ENST00000562506 MBIPQ9NS73 344 aa27.87■■■□□ 2.05
AP003071.3-201ENST00000562506 TBC1D2BQ9UPU7 963 aa27.86■■■□□ 2.05
AP003071.3-201ENST00000562506 SCN7AQ01118 1682 aa27.86■■■□□ 2.05
AP003071.3-201ENST00000562506 ERBB4Q15303 1308 aa27.86■■■□□ 2.05
AP003071.3-201ENST00000562506 DZIP3Q86Y13 1208 aaKnown RBP27.85■■■□□ 2.05
AP003071.3-201ENST00000562506 BCL2L12Q9HB09 334 aa27.85■■■□□ 2.05
AP003071.3-201ENST00000562506 PARP3Q9Y6F1 533 aa27.85■■■□□ 2.05
AP003071.3-201ENST00000562506 NGEFQ8N5V2 710 aa27.84■■■□□ 2.05
AP003071.3-201ENST00000562506 CD2APQ9Y5K6 639 aa27.84■■■□□ 2.05
AP003071.3-201ENST00000562506 TM4SF1P30408 202 aa27.83■■■□□ 2.05
AP003071.3-201ENST00000562506 BCORQ6W2J9 1755 aa27.82■■■□□ 2.04
AP003071.3-201ENST00000562506 HOXB7P09629 217 aa27.82■■■□□ 2.04
AP003071.3-201ENST00000562506 EIF2S2P20042 333 aaKnown RBP27.82■■■□□ 2.04
AP003071.3-201ENST00000562506 KRT24Q2M2I5 525 aa27.82■■■□□ 2.04
AP003071.3-201ENST00000562506 CAMTA2O94983 1202 aa27.81■■■□□ 2.04
AP003071.3-201ENST00000562506 DDR1Q08345 913 aa27.81■■■□□ 2.04
AP003071.3-201ENST00000562506 SALL2Q9Y467 1007 aaPredicted RBP27.81■■■□□ 2.04
AP003071.3-201ENST00000562506 IL16Q14005 1332 aa27.81■■■□□ 2.04
AP003071.3-201ENST00000562506 NFIXQ14938 502 aa27.8■■■□□ 2.04
AP003071.3-201ENST00000562506 POLRMTO00411 1230 aaKnown RBP27.78■■■□□ 2.04
AP003071.3-201ENST00000562506 MYL6BP14649 208 aa27.78■■■□□ 2.04
AP003071.3-201ENST00000562506 DUSP27Q5VZP5 1158 aa27.78■■■□□ 2.04
AP003071.3-201ENST00000562506 WDR63Q8IWG1 891 aa27.78■■■□□ 2.04
AP003071.3-201ENST00000562506 NLGN2Q8NFZ4 835 aa27.78■■■□□ 2.04
AP003071.3-201ENST00000562506 KIF13BQ9NQT8 1826 aa27.78■■■□□ 2.04
AP003071.3-201ENST00000562506 RGL2O15211 777 aa27.77■■■□□ 2.04
AP003071.3-201ENST00000562506 C10orf71Q711Q0 1435 aa27.76■■■□□ 2.04
AP003071.3-201ENST00000562506 DCAF8L1A6NGE4 600 aa27.76■■■□□ 2.03
AP003071.3-201ENST00000562506 MIER1Q8N108 512 aa27.76■■■□□ 2.03
AP003071.3-201ENST00000562506 ZNF652Q9Y2D9 606 aa27.76■■■□□ 2.03
AP003071.3-201ENST00000562506 PDIA6Q15084 440 aa27.75■■■□□ 2.03
AP003071.3-201ENST00000562506 HDGFL1Q5TGJ6 251 aa27.75■■■□□ 2.03
AP003071.3-201ENST00000562506 TBC1D9BQ66K14 1250 aa27.75■■■□□ 2.03
AP003071.3-201ENST00000562506 CLEC4GQ6UXB4 293 aa27.75■■■□□ 2.03
AP003071.3-201ENST00000562506 NECTIN2Q92692 538 aa27.75■■■□□ 2.03
AP003071.3-201ENST00000562506 AFDNP55196 1824 aaKnown RBP27.74■■■□□ 2.03
AP003071.3-201ENST00000562506 BICDL1Q6ZP65 573 aa27.74■■■□□ 2.03
AP003071.3-201ENST00000562506 NRXN2Q9P2S2 1712 aa27.73■■■□□ 2.03
AP003071.3-201ENST00000562506 KIF6Q6ZMV9 814 aa27.73■■■□□ 2.03
AP003071.3-201ENST00000562506 LRP10Q7Z4F1 713 aa27.73■■■□□ 2.03
AP003071.3-201ENST00000562506 TSR2Q969E8 191 aaKnown RBP27.73■■■□□ 2.03
AP003071.3-201ENST00000562506 SERPINB2P05120 415 aa27.72■■■□□ 2.03
AP003071.3-201ENST00000562506 PROSER3Q2NL68 480 aa27.72■■■□□ 2.03
AP003071.3-201ENST00000562506 DDX21Q9NR30 783 aaKnown RBP eCLIP27.72■■■□□ 2.03
AP003071.3-201ENST00000562506 MAP3K15Q6ZN16 1313 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms