RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 CFAP44Q96MT7 982 aa21.76■■□□□ 1.07
RPL28-211ENST00000560881 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
RPL28-211ENST00000560881 SNRPA1P09661 255 aaKnown RBP21.75■■□□□ 1.07
RPL28-211ENST00000560881 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
RPL28-211ENST00000560881 CCDC87Q9NVE4 849 aa21.75■■□□□ 1.07
RPL28-211ENST00000560881 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
RPL28-211ENST00000560881 PIP4K2AP48426 406 aaPredicted RBP21.75■■□□□ 1.07
RPL28-211ENST00000560881 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
RPL28-211ENST00000560881 A1BGP04217 495 aa21.74■■□□□ 1.07
RPL28-211ENST00000560881 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
RPL28-211ENST00000560881 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
RPL28-211ENST00000560881 RTCBQ9Y3I0 505 aaKnown RBP21.74■■□□□ 1.07
RPL28-211ENST00000560881 STARD3NLO95772 234 aa21.73■■□□□ 1.07
RPL28-211ENST00000560881 HMGB2P26583 209 aaKnown RBP21.73■■□□□ 1.07
RPL28-211ENST00000560881 CANXP27824 592 aaKnown RBP21.73■■□□□ 1.07
RPL28-211ENST00000560881 SSFA2P28290 1259 aa21.73■■□□□ 1.07
RPL28-211ENST00000560881 RPS6KA4O75676 772 aa21.72■■□□□ 1.07
RPL28-211ENST00000560881 CALD1Q05682 793 aaKnown RBP21.72■■□□□ 1.07
RPL28-211ENST00000560881 TSR2Q969E8 191 aaKnown RBP21.72■■□□□ 1.07
RPL28-211ENST00000560881 NCBP3Q53F19 620 aaKnown RBP21.72■■□□□ 1.07
RPL28-211ENST00000560881 TEX13AQ9BXU3 409 aaPredicted RBP21.72■■□□□ 1.07
RPL28-211ENST00000560881 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
RPL28-211ENST00000560881 GNAI1P63096 354 aa21.71■■□□□ 1.07
RPL28-211ENST00000560881 ATF5Q9Y2D1 282 aaPredicted RBP21.71■■□□□ 1.07
RPL28-211ENST00000560881 MSL1Q68DK7 614 aa21.7■■□□□ 1.06
RPL28-211ENST00000560881 ARHGEF1Q92888 912 aaKnown RBP21.7■■□□□ 1.06
RPL28-211ENST00000560881 SPINK5Q9NQ38 1064 aaPredicted RBP21.7■■□□□ 1.06
RPL28-211ENST00000560881 ZNF330Q9Y3S2 320 aaPredicted RBP21.69■■□□□ 1.06
RPL28-211ENST00000560881 COL15A1P39059 1388 aa21.69■■□□□ 1.06
RPL28-211ENST00000560881 ZNF521Q96K83 1311 aa21.69■■□□□ 1.06
RPL28-211ENST00000560881 TRAPPC3LQ5T215 181 aa21.69■■□□□ 1.06
RPL28-211ENST00000560881 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
RPL28-211ENST00000560881 LRP5O75197 1615 aa21.69■■□□□ 1.06
RPL28-211ENST00000560881 MTFR1LQ9H019 292 aa21.68■■□□□ 1.06
RPL28-211ENST00000560881 COL24A1Q17RW2 1714 aa21.67■■□□□ 1.06
RPL28-211ENST00000560881 WDR63Q8IWG1 891 aa21.67■■□□□ 1.06
RPL28-211ENST00000560881 NECTIN2Q92692 538 aa21.67■■□□□ 1.06
RPL28-211ENST00000560881 SRP68Q9UHB9 627 aaKnown RBP21.67■■□□□ 1.06
RPL28-211ENST00000560881 IL16Q14005 1332 aa21.67■■□□□ 1.06
RPL28-211ENST00000560881 NBPF26B4DH59 902 aa21.66■■□□□ 1.06
RPL28-211ENST00000560881 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
RPL28-211ENST00000560881 NBPF10Q6P3W6 841 aaKnown RBP21.66■■□□□ 1.06
RPL28-211ENST00000560881 NBPF15Q8N660 670 aa21.66■■□□□ 1.06
RPL28-211ENST00000560881 ELL2O00472 640 aaPredicted RBP21.66■■□□□ 1.06
RPL28-211ENST00000560881 ADRA2BP18089 450 aa21.66■■□□□ 1.06
RPL28-211ENST00000560881 RFC4P35249 363 aa21.66■■□□□ 1.06
RPL28-211ENST00000560881 NGEFQ8N5V2 710 aa21.66■■□□□ 1.06
RPL28-211ENST00000560881 FANCIQ9NVI1 1328 aa21.65■■□□□ 1.06
RPL28-211ENST00000560881 EIF5P55010 431 aaKnown RBP21.65■■□□□ 1.06
RPL28-211ENST00000560881 SPON1Q9HCB6 807 aa21.65■■□□□ 1.06
RPL28-211ENST00000560881 PTGER2P43116 358 aa21.64■■□□□ 1.05
RPL28-211ENST00000560881 DUSP27Q5VZP5 1158 aa21.64■■□□□ 1.05
RPL28-211ENST00000560881 C8orf58Q8NAV2 365 aa21.64■■□□□ 1.05
RPL28-211ENST00000560881 SLC16A10Q8TF71 515 aa21.64■■□□□ 1.05
RPL28-211ENST00000560881 TSPYL6Q8N831 410 aa21.63■■□□□ 1.05
RPL28-211ENST00000560881 USP42Q9H9J4 1324 aaKnown RBP21.63■■□□□ 1.05
RPL28-211ENST00000560881 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
RPL28-211ENST00000560881 ANXA1P04083 346 aa21.63■■□□□ 1.05
RPL28-211ENST00000560881 MYL6BP14649 208 aa21.63■■□□□ 1.05
RPL28-211ENST00000560881 IL6STP40189 918 aaPredicted RBP21.63■■□□□ 1.05
RPL28-211ENST00000560881 SGIP1Q9BQI5 828 aa21.63■■□□□ 1.05
RPL28-211ENST00000560881 BCORQ6W2J9 1755 aa21.62■■□□□ 1.05
RPL28-211ENST00000560881 GYS1P13807 737 aa21.62■■□□□ 1.05
RPL28-211ENST00000560881 PROSER3Q2NL68 480 aa21.62■■□□□ 1.05
RPL28-211ENST00000560881 USPL1Q5W0Q7 1092 aa21.61■■□□□ 1.05
RPL28-211ENST00000560881 ARXQ96QS3 562 aa21.61■■□□□ 1.05
RPL28-211ENST00000560881 TBC1D2BQ9UPU7 963 aa21.61■■□□□ 1.05
RPL28-211ENST00000560881 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
RPL28-211ENST00000560881 HDGFL1Q5TGJ6 251 aa21.6■■□□□ 1.05
RPL28-211ENST00000560881 PDIA6Q15084 440 aa21.6■■□□□ 1.05
RPL28-211ENST00000560881 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
RPL28-211ENST00000560881 FKBP8Q14318 412 aa21.59■■□□□ 1.05
RPL28-211ENST00000560881 ZPR1O75312 459 aa21.58■■□□□ 1.05
RPL28-211ENST00000560881 HOXB7P09629 217 aa21.58■■□□□ 1.05
RPL28-211ENST00000560881 GOLGA2Q08379 1002 aa21.58■■□□□ 1.05
RPL28-211ENST00000560881 DZIP3Q86Y13 1208 aaKnown RBP21.58■■□□□ 1.05
RPL28-211ENST00000560881 BCL2L12Q9HB09 334 aa21.58■■□□□ 1.05
RPL28-211ENST00000560881 CHPF2Q9P2E5 772 aa21.58■■□□□ 1.05
RPL28-211ENST00000560881 NARFQ9UHQ1 456 aa21.58■■□□□ 1.05
RPL28-211ENST00000560881 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
RPL28-211ENST00000560881 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
RPL28-211ENST00000560881 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
RPL28-211ENST00000560881 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
RPL28-211ENST00000560881 TWISTNBQ3B726 338 aaPredicted RBP21.56■■□□□ 1.04
RPL28-211ENST00000560881 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
RPL28-211ENST00000560881 A0A087WZG4 1122 aa21.55■■□□□ 1.04
RPL28-211ENST00000560881 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
RPL28-211ENST00000560881 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
RPL28-211ENST00000560881 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
RPL28-211ENST00000560881 MMP10P09238 476 aa21.54■■□□□ 1.04
RPL28-211ENST00000560881 POLD1P28340 1107 aa21.54■■□□□ 1.04
RPL28-211ENST00000560881 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
RPL28-211ENST00000560881 SLFN5Q08AF3 891 aa21.53■■□□□ 1.04
RPL28-211ENST00000560881 DDX21Q9NR30 783 aaKnown RBP eCLIP21.53■■□□□ 1.04
RPL28-211ENST00000560881 NUP98P52948 1817 aa21.53■■□□□ 1.04
RPL28-211ENST00000560881 E9PSI1 815 aa21.53■■□□□ 1.04
RPL28-211ENST00000560881 NLGN1Q8N2Q7 840 aa21.53■■□□□ 1.04
RPL28-211ENST00000560881 GOLGB1Q14789 3259 aaKnown RBP21.52■■□□□ 1.04
RPL28-211ENST00000560881 AFDNP55196 1824 aaKnown RBP21.52■■□□□ 1.03
RPL28-211ENST00000560881 DDR1Q08345 913 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms