RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
RABGGTA-211ENST00000559850 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
RABGGTA-211ENST00000559850 SOS1Q07889 1333 aaPredicted RBP19.6■□□□□ 0.73
RABGGTA-211ENST00000559850 ADRA2BP18089 450 aa19.6■□□□□ 0.73
RABGGTA-211ENST00000559850 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-211ENST00000559850 RIPK4P57078 832 aa19.6■□□□□ 0.73
RABGGTA-211ENST00000559850 GYS1P13807 737 aa19.59■□□□□ 0.73
RABGGTA-211ENST00000559850 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
RABGGTA-211ENST00000559850 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.73
RABGGTA-211ENST00000559850 MMP10P09238 476 aa19.58■□□□□ 0.72
RABGGTA-211ENST00000559850 RUNDC1Q96C34 613 aa19.58■□□□□ 0.72
RABGGTA-211ENST00000559850 COL15A1P39059 1388 aa19.57■□□□□ 0.72
RABGGTA-211ENST00000559850 USP42Q9H9J4 1324 aaKnown RBP19.57■□□□□ 0.72
RABGGTA-211ENST00000559850 STARD3NLO95772 234 aa19.57■□□□□ 0.72
RABGGTA-211ENST00000559850 A1BGP04217 495 aa19.57■□□□□ 0.72
RABGGTA-211ENST00000559850 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-211ENST00000559850 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-211ENST00000559850 ANP32CO43423 234 aa19.56■□□□□ 0.72
RABGGTA-211ENST00000559850 FKBP8Q14318 412 aa19.56■□□□□ 0.72
RABGGTA-211ENST00000559850 USPL1Q5W0Q7 1092 aa19.56■□□□□ 0.72
RABGGTA-211ENST00000559850 USP16Q9Y5T5 823 aa19.56■□□□□ 0.72
RABGGTA-211ENST00000559850 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
RABGGTA-211ENST00000559850 NLGN1Q8N2Q7 840 aa19.54■□□□□ 0.72
RABGGTA-211ENST00000559850 TEX13AQ9BXU3 409 aaPredicted RBP19.54■□□□□ 0.72
RABGGTA-211ENST00000559850 SCN7AQ01118 1682 aa19.53■□□□□ 0.72
RABGGTA-211ENST00000559850 N4BP2Q86UW6 1770 aaPredicted RBP19.53■□□□□ 0.72
RABGGTA-211ENST00000559850 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-211ENST00000559850 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
RABGGTA-211ENST00000559850 KIAA1551Q9HCM1 1747 aa19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 ZPR1O75312 459 aa19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 SNRPA1P09661 255 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 TRIM35Q9UPQ4 493 aa19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-211ENST00000559850 DCAF8L1A6NGE4 600 aa19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 DDR1Q08345 913 aa19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 NARFQ9UHQ1 456 aa19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 BCORQ6W2J9 1755 aa19.51■□□□□ 0.71
RABGGTA-211ENST00000559850 APAF1O14727 1248 aa19.5■□□□□ 0.71
RABGGTA-211ENST00000559850 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
RABGGTA-211ENST00000559850 MRS2Q9HD23 443 aa19.5■□□□□ 0.71
RABGGTA-211ENST00000559850 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
RABGGTA-211ENST00000559850 CD2APQ9Y5K6 639 aa19.5■□□□□ 0.71
RABGGTA-211ENST00000559850 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-211ENST00000559850 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-211ENST00000559850 PARP3Q9Y6F1 533 aa19.49■□□□□ 0.71
RABGGTA-211ENST00000559850 NBPF26B4DH59 902 aa19.48■□□□□ 0.71
RABGGTA-211ENST00000559850 IL6STP40189 918 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-211ENST00000559850 GPR162Q16538 588 aa19.48■□□□□ 0.71
RABGGTA-211ENST00000559850 NBPF10Q6P3W6 841 aaKnown RBP19.48■□□□□ 0.71
RABGGTA-211ENST00000559850 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
RABGGTA-211ENST00000559850 BICDL1Q6ZP65 573 aa19.47■□□□□ 0.71
RABGGTA-211ENST00000559850 C10orf71Q711Q0 1435 aa19.47■□□□□ 0.71
RABGGTA-211ENST00000559850 A0A087WZG4 1122 aa19.46■□□□□ 0.71
RABGGTA-211ENST00000559850 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
RABGGTA-211ENST00000559850 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
RABGGTA-211ENST00000559850 TM4SF1P30408 202 aa19.46■□□□□ 0.71
RABGGTA-211ENST00000559850 NFIXQ14938 502 aa19.46■□□□□ 0.71
RABGGTA-211ENST00000559850 POLRMTO00411 1230 aaKnown RBP19.45■□□□□ 0.7
RABGGTA-211ENST00000559850 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
RABGGTA-211ENST00000559850 PXDNLA1KZ92 1463 aa19.44■□□□□ 0.7
RABGGTA-211ENST00000559850 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
RABGGTA-211ENST00000559850 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
RABGGTA-211ENST00000559850 NGEFQ8N5V2 710 aa19.44■□□□□ 0.7
RABGGTA-211ENST00000559850 CHD4Q14839 1912 aa19.43■□□□□ 0.7
RABGGTA-211ENST00000559850 TBC1D9BQ66K14 1250 aa19.43■□□□□ 0.7
RABGGTA-211ENST00000559850 BRCA1P38398 1863 aaKnown RBP19.43■□□□□ 0.7
RABGGTA-211ENST00000559850 A0A0G2JLW4 131 aa19.42■□□□□ 0.7
RABGGTA-211ENST00000559850 CAMTA2O94983 1202 aa19.42■□□□□ 0.7
RABGGTA-211ENST00000559850 NPM2Q86SE8 214 aaKnown RBP19.42■□□□□ 0.7
RABGGTA-211ENST00000559850 CHL1O00533 1208 aa19.41■□□□□ 0.7
RABGGTA-211ENST00000559850 MYL6BP14649 208 aa19.41■□□□□ 0.7
RABGGTA-211ENST00000559850 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
RABGGTA-211ENST00000559850 NECTIN2Q92692 538 aa19.41■□□□□ 0.7
RABGGTA-211ENST00000559850 ANKRD31Q8N7Z5 1873 aa19.41■□□□□ 0.7
RABGGTA-211ENST00000559850 SERPINB2P05120 415 aa19.4■□□□□ 0.7
RABGGTA-211ENST00000559850 DPEP1P16444 411 aa19.4■□□□□ 0.7
RABGGTA-211ENST00000559850 NUP98P52948 1817 aa19.39■□□□□ 0.7
RABGGTA-211ENST00000559850 CCDC24Q8N4L8 307 aa19.39■□□□□ 0.69
RABGGTA-211ENST00000559850 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
RABGGTA-211ENST00000559850 CARMIL3Q8ND23 1372 aa19.39■□□□□ 0.69
RABGGTA-211ENST00000559850 ANXA1P04083 346 aa19.38■□□□□ 0.69
RABGGTA-211ENST00000559850 YY1P25490 414 aa19.38■□□□□ 0.69
RABGGTA-211ENST00000559850 CHRNA5P30532 468 aa19.38■□□□□ 0.69
RABGGTA-211ENST00000559850 HLFQ16534 295 aa19.37■□□□□ 0.69
RABGGTA-211ENST00000559850 TTLL7Q6ZT98 887 aa19.37■□□□□ 0.69
RABGGTA-211ENST00000559850 FAM9BQ8IZU0 186 aa19.37■□□□□ 0.69
RABGGTA-211ENST00000559850 MBIPQ9NS73 344 aa19.37■□□□□ 0.69
RABGGTA-211ENST00000559850 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
RABGGTA-211ENST00000559850 TGFB2P61812 414 aa19.36■□□□□ 0.69
RABGGTA-211ENST00000559850 PROSER3Q2NL68 480 aa19.36■□□□□ 0.69
RABGGTA-211ENST00000559850 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
RABGGTA-211ENST00000559850 DLEC1Q9Y238 1755 aa19.36■□□□□ 0.69
RABGGTA-211ENST00000559850 COL11A2P13942 1736 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-211ENST00000559850 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
RABGGTA-211ENST00000559850 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms