RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 STARD3NLO95772 234 aa25.57■■□□□ 1.68
LINS1-206ENST00000559827 SSFA2P28290 1259 aa25.57■■□□□ 1.68
LINS1-206ENST00000559827 INTS5Q6P9B9 1019 aaKnown RBP25.57■■□□□ 1.68
LINS1-206ENST00000559827 AMIGO3Q86WK7 504 aa25.57■■□□□ 1.68
LINS1-206ENST00000559827 CCDC87Q9NVE4 849 aa25.57■■□□□ 1.68
LINS1-206ENST00000559827 SALL2Q9Y467 1007 aaPredicted RBP25.57■■□□□ 1.68
LINS1-206ENST00000559827 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
LINS1-206ENST00000559827 GNPATO15228 680 aa25.56■■□□□ 1.68
LINS1-206ENST00000559827 FLAD1Q8NFF5 587 aa25.56■■□□□ 1.68
LINS1-206ENST00000559827 PRAMEF22A3QJZ6 481 aa25.55■■□□□ 1.68
LINS1-206ENST00000559827 RPS6KA4O75676 772 aa25.55■■□□□ 1.68
LINS1-206ENST00000559827 COL24A1Q17RW2 1714 aa25.54■■□□□ 1.68
LINS1-206ENST00000559827 USP16Q9Y5T5 823 aa25.54■■□□□ 1.68
LINS1-206ENST00000559827 ADRA2BP18089 450 aa25.53■■□□□ 1.68
LINS1-206ENST00000559827 ZBTB1Q9Y2K1 713 aa25.53■■□□□ 1.68
LINS1-206ENST00000559827 RTCBQ9Y3I0 505 aaKnown RBP25.53■■□□□ 1.68
LINS1-206ENST00000559827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.52■■□□□ 1.68
LINS1-206ENST00000559827 HOXB7P09629 217 aa25.52■■□□□ 1.68
LINS1-206ENST00000559827 PDGFDQ9GZP0 370 aaPredicted RBP25.52■■□□□ 1.68
LINS1-206ENST00000559827 SOS1Q07889 1333 aaPredicted RBP25.52■■□□□ 1.68
LINS1-206ENST00000559827 COL23A1Q86Y22 540 aaPredicted RBP25.51■■□□□ 1.67
LINS1-206ENST00000559827 LRP5O75197 1615 aa25.49■■□□□ 1.67
LINS1-206ENST00000559827 FANCIQ9NVI1 1328 aa25.49■■□□□ 1.67
LINS1-206ENST00000559827 SLC16A10Q8TF71 515 aa25.49■■□□□ 1.67
LINS1-206ENST00000559827 COL15A1P39059 1388 aa25.48■■□□□ 1.67
LINS1-206ENST00000559827 ERBB4Q15303 1308 aa25.48■■□□□ 1.67
LINS1-206ENST00000559827 PHF14O94880 888 aa25.48■■□□□ 1.67
LINS1-206ENST00000559827 KRT24Q2M2I5 525 aa25.48■■□□□ 1.67
LINS1-206ENST00000559827 TSR2Q969E8 191 aaKnown RBP25.48■■□□□ 1.67
LINS1-206ENST00000559827 SPINK5Q9NQ38 1064 aaPredicted RBP25.48■■□□□ 1.67
LINS1-206ENST00000559827 A1BGP04217 495 aa25.47■■□□□ 1.67
LINS1-206ENST00000559827 IL6STP40189 918 aaPredicted RBP25.47■■□□□ 1.67
LINS1-206ENST00000559827 EIF5P55010 431 aaKnown RBP25.47■■□□□ 1.67
LINS1-206ENST00000559827 SCN7AQ01118 1682 aa25.46■■□□□ 1.67
LINS1-206ENST00000559827 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
LINS1-206ENST00000559827 SMIM5Q71RC9 77 aa25.46■■□□□ 1.67
LINS1-206ENST00000559827 MYH16Q9H6N6 1097 aa25.46■■□□□ 1.67
LINS1-206ENST00000559827 GOLGA2Q08379 1002 aa25.45■■□□□ 1.66
LINS1-206ENST00000559827 ARHGEF1Q92888 912 aaKnown RBP25.45■■□□□ 1.66
LINS1-206ENST00000559827 MTFR1LQ9H019 292 aa25.45■■□□□ 1.66
LINS1-206ENST00000559827 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
LINS1-206ENST00000559827 NBPF26B4DH59 902 aa25.44■■□□□ 1.66
LINS1-206ENST00000559827 CANXP27824 592 aaKnown RBP25.44■■□□□ 1.66
LINS1-206ENST00000559827 DUSP27Q5VZP5 1158 aa25.44■■□□□ 1.66
LINS1-206ENST00000559827 NBPF10Q6P3W6 841 aaKnown RBP25.44■■□□□ 1.66
LINS1-206ENST00000559827 NBPF15Q8N660 670 aa25.44■■□□□ 1.66
LINS1-206ENST00000559827 C8orf58Q8NAV2 365 aa25.43■■□□□ 1.66
LINS1-206ENST00000559827 USP42Q9H9J4 1324 aaKnown RBP25.42■■□□□ 1.66
LINS1-206ENST00000559827 E9PSI1 815 aa25.42■■□□□ 1.66
LINS1-206ENST00000559827 HNRNPUQ00839 825 aaKnown RBP eCLIP25.42■■□□□ 1.66
LINS1-206ENST00000559827 A0A087WZG4 1122 aa25.4■■□□□ 1.66
LINS1-206ENST00000559827 ZBTB7AO95365 584 aa25.4■■□□□ 1.66
LINS1-206ENST00000559827 RFC4P35249 363 aa25.4■■□□□ 1.66
LINS1-206ENST00000559827 HDGFL1Q5TGJ6 251 aa25.4■■□□□ 1.66
LINS1-206ENST00000559827 MSH5O43196 834 aa25.39■■□□□ 1.66
LINS1-206ENST00000559827 EIF2S2P20042 333 aaKnown RBP25.39■■□□□ 1.66
LINS1-206ENST00000559827 PIP4K2AP48426 406 aaPredicted RBP25.39■■□□□ 1.66
LINS1-206ENST00000559827 SLFN5Q08AF3 891 aa25.39■■□□□ 1.66
LINS1-206ENST00000559827 PDIA6Q15084 440 aa25.39■■□□□ 1.66
LINS1-206ENST00000559827 LRP10Q7Z4F1 713 aa25.39■■□□□ 1.66
LINS1-206ENST00000559827 NARFQ9UHQ1 456 aa25.39■■□□□ 1.66
LINS1-206ENST00000559827 ZBED9Q6R2W3 1325 aa25.38■■□□□ 1.65
LINS1-206ENST00000559827 TRMT2AQ8IZ69 625 aaKnown RBP25.38■■□□□ 1.65
LINS1-206ENST00000559827 TSPYL6Q8N831 410 aa25.38■■□□□ 1.65
LINS1-206ENST00000559827 SGIP1Q9BQI5 828 aa25.38■■□□□ 1.65
LINS1-206ENST00000559827 CHMP4AQ9BY43 222 aa25.38■■□□□ 1.65
LINS1-206ENST00000559827 SPON1Q9HCB6 807 aa25.38■■□□□ 1.65
LINS1-206ENST00000559827 GYS1P13807 737 aa25.37■■□□□ 1.65
LINS1-206ENST00000559827 TWISTNBQ3B726 338 aaPredicted RBP25.37■■□□□ 1.65
LINS1-206ENST00000559827 PTGER2P43116 358 aa25.36■■□□□ 1.65
LINS1-206ENST00000559827 DDX21Q9NR30 783 aaKnown RBP eCLIP25.36■■□□□ 1.65
LINS1-206ENST00000559827 ELL2O00472 640 aaPredicted RBP25.35■■□□□ 1.65
LINS1-206ENST00000559827 RGL2O15211 777 aa25.35■■□□□ 1.65
LINS1-206ENST00000559827 EXOSC9Q06265 439 aaKnown RBP25.35■■□□□ 1.65
LINS1-206ENST00000559827 CDCA7LQ96GN5 454 aa25.35■■□□□ 1.65
LINS1-206ENST00000559827 SRP68Q9UHB9 627 aaKnown RBP25.35■■□□□ 1.65
LINS1-206ENST00000559827 ZPR1O75312 459 aa25.34■■□□□ 1.65
LINS1-206ENST00000559827 PROSER3Q2NL68 480 aa25.34■■□□□ 1.65
LINS1-206ENST00000559827 NPM2Q86SE8 214 aaKnown RBP25.34■■□□□ 1.65
LINS1-206ENST00000559827 CHPF2Q9P2E5 772 aa25.34■■□□□ 1.65
LINS1-206ENST00000559827 DBF4Q9UBU7 674 aaPredicted RBP25.34■■□□□ 1.65
LINS1-206ENST00000559827 ZNF330Q9Y3S2 320 aaPredicted RBP25.34■■□□□ 1.65
LINS1-206ENST00000559827 CACNA1FO60840 1977 aa25.33■■□□□ 1.65
LINS1-206ENST00000559827 DZIP3Q86Y13 1208 aaKnown RBP25.33■■□□□ 1.65
LINS1-206ENST00000559827 NLGN1Q8N2Q7 840 aa25.33■■□□□ 1.65
LINS1-206ENST00000559827 NECTIN2Q92692 538 aa25.33■■□□□ 1.65
LINS1-206ENST00000559827 ATF5Q9Y2D1 282 aaPredicted RBP25.33■■□□□ 1.65
LINS1-206ENST00000559827 CAMTA2O94983 1202 aa25.32■■□□□ 1.64
LINS1-206ENST00000559827 MYL6BP14649 208 aa25.32■■□□□ 1.64
LINS1-206ENST00000559827 USPL1Q5W0Q7 1092 aa25.32■■□□□ 1.64
LINS1-206ENST00000559827 BCL2L12Q9HB09 334 aa25.32■■□□□ 1.64
LINS1-206ENST00000559827 VAMP4O75379 141 aa25.31■■□□□ 1.64
LINS1-206ENST00000559827 CCDC30Q5VVM6 783 aa25.31■■□□□ 1.64
LINS1-206ENST00000559827 MSL1Q68DK7 614 aa25.31■■□□□ 1.64
LINS1-206ENST00000559827 TBC1D2BQ9UPU7 963 aa25.31■■□□□ 1.64
LINS1-206ENST00000559827 FKBP8Q14318 412 aa25.3■■□□□ 1.64
LINS1-206ENST00000559827 NUP98P52948 1817 aa25.29■■□□□ 1.64
LINS1-206ENST00000559827 ANXA1P04083 346 aa25.29■■□□□ 1.64
LINS1-206ENST00000559827 HYPKQ9NX55 129 aa25.29■■□□□ 1.64
LINS1-206ENST00000559827 POLD1P28340 1107 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms