RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 ATP6V1AP38606 617 aa19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 DNAJC10Q8IXB1 793 aa19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 LINC00116Q8NCU8 138 aa19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 CCNL1Q9UK58 526 aaPredicted RBP19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 USP16Q9Y5T5 823 aa19.19■□□□□ 0.66
SNRPA1-207ENST00000559309 UBR3Q6ZT12 1888 aa19.18■□□□□ 0.66
SNRPA1-207ENST00000559309 RC3H1Q5TC82 1133 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-207ENST00000559309 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
SNRPA1-207ENST00000559309 CNTNAP4Q9C0A0 1308 aa19.18■□□□□ 0.66
SNRPA1-207ENST00000559309 TUBGCP6Q96RT7 1819 aa19.17■□□□□ 0.66
SNRPA1-207ENST00000559309 PDIA6Q15084 440 aa19.17■□□□□ 0.66
SNRPA1-207ENST00000559309 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
SNRPA1-207ENST00000559309 ERBB4Q15303 1308 aa19.17■□□□□ 0.66
SNRPA1-207ENST00000559309 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
SNRPA1-207ENST00000559309 INTS5Q6P9B9 1019 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-207ENST00000559309 ZNF428Q96B54 188 aa19.16■□□□□ 0.66
SNRPA1-207ENST00000559309 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-207ENST00000559309 KCNQ4P56696 695 aa19.15■□□□□ 0.66
SNRPA1-207ENST00000559309 AKT1S1Q96B36 256 aa19.15■□□□□ 0.66
SNRPA1-207ENST00000559309 NBPF26B4DH59 902 aa19.13■□□□□ 0.65
SNRPA1-207ENST00000559309 STARD3NLO95772 234 aa19.13■□□□□ 0.65
SNRPA1-207ENST00000559309 NBPF14Q5TI25 921 aa19.13■□□□□ 0.65
SNRPA1-207ENST00000559309 NBPF10Q6P3W6 841 aaKnown RBP19.13■□□□□ 0.65
SNRPA1-207ENST00000559309 NBPF15Q8N660 670 aa19.13■□□□□ 0.65
SNRPA1-207ENST00000559309 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-207ENST00000559309 CRKLP46109 303 aaKnown RBP19.12■□□□□ 0.65
SNRPA1-207ENST00000559309 BRPF1P55201 1214 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-207ENST00000559309 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
SNRPA1-207ENST00000559309 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
SNRPA1-207ENST00000559309 CCDC87Q9NVE4 849 aa19.11■□□□□ 0.65
SNRPA1-207ENST00000559309 ZBTB1Q9Y2K1 713 aa19.11■□□□□ 0.65
SNRPA1-207ENST00000559309 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
SNRPA1-207ENST00000559309 A1BGP04217 495 aa19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 EIF5P55010 431 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 ZNF827Q17R98 1081 aa19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 ALDH1L2Q3SY69 923 aa19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 AMIGO3Q86WK7 504 aa19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 ANO8Q9HCE9 1232 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 DDX21Q9NR30 783 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNRPA1-207ENST00000559309 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
SNRPA1-207ENST00000559309 IL6STP40189 918 aaPredicted RBP19.09■□□□□ 0.65
SNRPA1-207ENST00000559309 RARSP54136 660 aaKnown RBP19.08■□□□□ 0.64
SNRPA1-207ENST00000559309 PROSER3Q2NL68 480 aa19.08■□□□□ 0.64
SNRPA1-207ENST00000559309 CCDC30Q5VVM6 783 aa19.08■□□□□ 0.64
SNRPA1-207ENST00000559309 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.64
SNRPA1-207ENST00000559309 BCORQ6W2J9 1755 aa19.08■□□□□ 0.64
SNRPA1-207ENST00000559309 SSH1Q8WYL5 1049 aa19.07■□□□□ 0.64
SNRPA1-207ENST00000559309 CHPF2Q9P2E5 772 aa19.07■□□□□ 0.64
SNRPA1-207ENST00000559309 SCN7AQ01118 1682 aa19.06■□□□□ 0.64
SNRPA1-207ENST00000559309 EIF2S2P20042 333 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-207ENST00000559309 SLC15A2Q16348 729 aa19.06■□□□□ 0.64
SNRPA1-207ENST00000559309 MRPL50Q8N5N7 158 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-207ENST00000559309 CASZ1Q86V15 1759 aa19.06■□□□□ 0.64
SNRPA1-207ENST00000559309 COL24A1Q17RW2 1714 aa19.05■□□□□ 0.64
SNRPA1-207ENST00000559309 SSFA2P28290 1259 aa19.05■□□□□ 0.64
SNRPA1-207ENST00000559309 RGL2O15211 777 aa19.04■□□□□ 0.64
SNRPA1-207ENST00000559309 ADRA2BP18089 450 aa19.04■□□□□ 0.64
SNRPA1-207ENST00000559309 HYPKQ9NX55 129 aa19.04■□□□□ 0.64
SNRPA1-207ENST00000559309 COL15A1P39059 1388 aa19.04■□□□□ 0.64
SNRPA1-207ENST00000559309 PNPLA7Q6ZV29 1317 aa19.03■□□□□ 0.64
SNRPA1-207ENST00000559309 GNPATO15228 680 aa19.02■□□□□ 0.64
SNRPA1-207ENST00000559309 ANXA1P04083 346 aa19.02■□□□□ 0.64
SNRPA1-207ENST00000559309 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-207ENST00000559309 G2E3Q7L622 706 aa19.02■□□□□ 0.64
SNRPA1-207ENST00000559309 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
SNRPA1-207ENST00000559309 AK7Q96M32 723 aa19.02■□□□□ 0.64
SNRPA1-207ENST00000559309 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
SNRPA1-207ENST00000559309 CANXP27824 592 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-207ENST00000559309 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-207ENST00000559309 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-207ENST00000559309 N4BP2Q86UW6 1770 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-207ENST00000559309 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
SNRPA1-207ENST00000559309 FLAD1Q8NFF5 587 aa19■□□□□ 0.63
SNRPA1-207ENST00000559309 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
SNRPA1-207ENST00000559309 STK31Q9BXU1 1019 aa19■□□□□ 0.63
SNRPA1-207ENST00000559309 STK32BQ9NY57 414 aa19■□□□□ 0.63
SNRPA1-207ENST00000559309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.99■□□□□ 0.63
SNRPA1-207ENST00000559309 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
SNRPA1-207ENST00000559309 MYL6BP14649 208 aa18.99■□□□□ 0.63
SNRPA1-207ENST00000559309 NUP98P52948 1817 aa18.99■□□□□ 0.63
SNRPA1-207ENST00000559309 A0A087WZG4 1122 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 BCAR3O75815 825 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 FLIIQ13045 1269 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 TTLL7Q6ZT98 887 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 SMIM5Q71RC9 77 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 COPS6Q7L5N1 327 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 COL23A1Q86Y22 540 aaPredicted RBP18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 XAGE3Q8WTP9 111 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 BCL2L12Q9HB09 334 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 SPON1Q9HCB6 807 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 NARFQ9UHQ1 456 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 RCAN3Q9UKA8 241 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 USP42Q9H9J4 1324 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-207ENST00000559309 ADCY9O60503 1353 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms