RNA–Protein interactions for RNA: ENST00000558729.5

PKNOX2-210, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-210ENST00000558729 PSDA5PKW4 1024 aaPredicted RBP21.41■■□□□ 1.02
PKNOX2-210ENST00000558729 HOXB7P09629 217 aa21.41■■□□□ 1.02
PKNOX2-210ENST00000558729 PNPLA7Q6ZV29 1317 aa21.4■■□□□ 1.02
PKNOX2-210ENST00000558729 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
PKNOX2-210ENST00000558729 SLC16A10Q8TF71 515 aa21.4■■□□□ 1.02
PKNOX2-210ENST00000558729 CHMP4AQ9BY43 222 aa21.4■■□□□ 1.02
PKNOX2-210ENST00000558729 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
PKNOX2-210ENST00000558729 QSER1Q2KHR3 1735 aa21.39■■□□□ 1.01
PKNOX2-210ENST00000558729 INTS5Q6P9B9 1019 aaKnown RBP21.39■■□□□ 1.01
PKNOX2-210ENST00000558729 TRAPPC3LQ5T215 181 aa21.38■■□□□ 1.01
PKNOX2-210ENST00000558729 MYH16Q9H6N6 1097 aa21.38■■□□□ 1.01
PKNOX2-210ENST00000558729 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
PKNOX2-210ENST00000558729 ERBB4Q15303 1308 aa21.37■■□□□ 1.01
PKNOX2-210ENST00000558729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.37■■□□□ 1.01
PKNOX2-210ENST00000558729 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
PKNOX2-210ENST00000558729 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
PKNOX2-210ENST00000558729 ZBTB1Q9Y2K1 713 aa21.36■■□□□ 1.01
PKNOX2-210ENST00000558729 IL6STP40189 918 aaPredicted RBP21.35■■□□□ 1.01
PKNOX2-210ENST00000558729 COL23A1Q86Y22 540 aaPredicted RBP21.35■■□□□ 1.01
PKNOX2-210ENST00000558729 A0A087WZG4 1122 aa21.34■■□□□ 1.01
PKNOX2-210ENST00000558729 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
PKNOX2-210ENST00000558729 E9PSI1 815 aa21.34■■□□□ 1.01
PKNOX2-210ENST00000558729 PHF14O94880 888 aa21.34■■□□□ 1.01
PKNOX2-210ENST00000558729 UBR3Q6ZT12 1888 aa21.34■■□□□ 1.01
PKNOX2-210ENST00000558729 FANCIQ9NVI1 1328 aa21.33■■□□□ 1.01
PKNOX2-210ENST00000558729 MSH5O43196 834 aa21.33■■□□□ 1.01
PKNOX2-210ENST00000558729 CANXP27824 592 aaKnown RBP21.33■■□□□ 1.01
PKNOX2-210ENST00000558729 RFC4P35249 363 aa21.33■■□□□ 1.01
PKNOX2-210ENST00000558729 EIF5P55010 431 aaKnown RBP21.33■■□□□ 1.01
PKNOX2-210ENST00000558729 MTFR1LQ9H019 292 aa21.33■■□□□ 1.01
PKNOX2-210ENST00000558729 A1BGP04217 495 aa21.32■■□□□ 1
PKNOX2-210ENST00000558729 HNRNPUQ00839 825 aaKnown RBP eCLIP21.32■■□□□ 1
PKNOX2-210ENST00000558729 DUSP27Q5VZP5 1158 aa21.32■■□□□ 1
PKNOX2-210ENST00000558729 ARHGEF1Q92888 912 aaKnown RBP21.32■■□□□ 1
PKNOX2-210ENST00000558729 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
PKNOX2-210ENST00000558729 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
PKNOX2-210ENST00000558729 CASZ1Q86V15 1759 aa21.32■■□□□ 1
PKNOX2-210ENST00000558729 MYH14Q7Z406 1995 aaKnown RBP21.31■■□□□ 1
PKNOX2-210ENST00000558729 AMIGO3Q86WK7 504 aa21.31■■□□□ 1
PKNOX2-210ENST00000558729 COL15A1P39059 1388 aa21.31■■□□□ 1
PKNOX2-210ENST00000558729 TUBGCP6Q96RT7 1819 aa21.3■■□□□ 1
PKNOX2-210ENST00000558729 HDGFL1Q5TGJ6 251 aa21.3■■□□□ 1
PKNOX2-210ENST00000558729 SPON1Q9HCB6 807 aa21.3■■□□□ 1
PKNOX2-210ENST00000558729 EIF2S2P20042 333 aaKnown RBP21.29■■□□□ 1
PKNOX2-210ENST00000558729 KRT24Q2M2I5 525 aa21.29■■□□□ 1
PKNOX2-210ENST00000558729 NBPF26B4DH59 902 aa21.28■■□□□ 1
PKNOX2-210ENST00000558729 RGL2O15211 777 aa21.28■■□□□ 1
PKNOX2-210ENST00000558729 ZPR1O75312 459 aa21.28■■□□□ 1
PKNOX2-210ENST00000558729 SLFN5Q08AF3 891 aa21.28■■□□□ 1
PKNOX2-210ENST00000558729 NBPF10Q6P3W6 841 aaKnown RBP21.28■■□□□ 1
PKNOX2-210ENST00000558729 NBPF15Q8N660 670 aa21.28■■□□□ 1
PKNOX2-210ENST00000558729 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
PKNOX2-210ENST00000558729 PDGFDQ9GZP0 370 aaPredicted RBP21.28■■□□□ 1
PKNOX2-210ENST00000558729 SPINK5Q9NQ38 1064 aaPredicted RBP21.28■■□□□ 1
PKNOX2-210ENST00000558729 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
PKNOX2-210ENST00000558729 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
PKNOX2-210ENST00000558729 NLGN1Q8N2Q7 840 aa21.27■■□□□ 1
PKNOX2-210ENST00000558729 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
PKNOX2-210ENST00000558729 NARFQ9UHQ1 456 aa21.27■■□□□ 1
PKNOX2-210ENST00000558729 ZBTB7AO95365 584 aa21.26■□□□□ 0.99
PKNOX2-210ENST00000558729 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
PKNOX2-210ENST00000558729 DDX21Q9NR30 783 aaKnown RBP eCLIP21.26■□□□□ 0.99
PKNOX2-210ENST00000558729 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
PKNOX2-210ENST00000558729 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
PKNOX2-210ENST00000558729 ELL2O00472 640 aaPredicted RBP21.25■□□□□ 0.99
PKNOX2-210ENST00000558729 POLD1P28340 1107 aa21.25■□□□□ 0.99
PKNOX2-210ENST00000558729 SMIM5Q71RC9 77 aa21.25■□□□□ 0.99
PKNOX2-210ENST00000558729 EXOSC9Q06265 439 aaKnown RBP21.24■□□□□ 0.99
PKNOX2-210ENST00000558729 DZIP3Q86Y13 1208 aaKnown RBP21.24■□□□□ 0.99
PKNOX2-210ENST00000558729 TRMT2AQ8IZ69 625 aaKnown RBP21.24■□□□□ 0.99
PKNOX2-210ENST00000558729 GYS1P13807 737 aa21.23■□□□□ 0.99
PKNOX2-210ENST00000558729 PDIA6Q15084 440 aa21.23■□□□□ 0.99
PKNOX2-210ENST00000558729 TSPYL6Q8N831 410 aa21.23■□□□□ 0.99
PKNOX2-210ENST00000558729 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
PKNOX2-210ENST00000558729 LRP5O75197 1615 aa21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 MYL6BP14649 208 aa21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 PIP4K2AP48426 406 aaPredicted RBP21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 USPL1Q5W0Q7 1092 aa21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 STK31Q9BXU1 1019 aa21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 ATF5Q9Y2D1 282 aaPredicted RBP21.22■□□□□ 0.99
PKNOX2-210ENST00000558729 CLEC4GQ6UXB4 293 aa21.21■□□□□ 0.99
PKNOX2-210ENST00000558729 KIF6Q6ZMV9 814 aa21.21■□□□□ 0.99
PKNOX2-210ENST00000558729 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
PKNOX2-210ENST00000558729 SRP68Q9UHB9 627 aaKnown RBP21.21■□□□□ 0.99
PKNOX2-210ENST00000558729 ZNF652Q9Y2D9 606 aa21.21■□□□□ 0.99
PKNOX2-210ENST00000558729 ERVV-1B6SEH8 477 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 VAMP4O75379 141 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 LRP10Q7Z4F1 713 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 ZNF428Q96B54 188 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 ARXQ96QS3 562 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 SGIP1Q9BQI5 828 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 TBC1D2BQ9UPU7 963 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 C4AP0C0L4 1744 aa21.2■□□□□ 0.98
PKNOX2-210ENST00000558729 PTGER2P43116 358 aa21.19■□□□□ 0.98
PKNOX2-210ENST00000558729 PROSER3Q2NL68 480 aa21.18■□□□□ 0.98
PKNOX2-210ENST00000558729 MSL1Q68DK7 614 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms