RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 IFT57Q9NWB7 429 aa21.82■■□□□ 1.08
PBX4-202ENST00000557978 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
PBX4-202ENST00000557978 ADRA2BP18089 450 aa21.81■■□□□ 1.08
PBX4-202ENST00000557978 COL23A1Q86Y22 540 aaPredicted RBP21.81■■□□□ 1.08
PBX4-202ENST00000557978 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
PBX4-202ENST00000557978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.8■■□□□ 1.08
PBX4-202ENST00000557978 PHF14O94880 888 aa21.8■■□□□ 1.08
PBX4-202ENST00000557978 TRAPPC3LQ5T215 181 aa21.8■■□□□ 1.08
PBX4-202ENST00000557978 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
PBX4-202ENST00000557978 SALL2Q9Y467 1007 aaPredicted RBP21.8■■□□□ 1.08
PBX4-202ENST00000557978 COL24A1Q17RW2 1714 aa21.8■■□□□ 1.08
PBX4-202ENST00000557978 INTS5Q6P9B9 1019 aaKnown RBP21.8■■□□□ 1.08
PBX4-202ENST00000557978 USP16Q9Y5T5 823 aa21.8■■□□□ 1.08
PBX4-202ENST00000557978 LRP5O75197 1615 aa21.79■■□□□ 1.08
PBX4-202ENST00000557978 GIGYF1O75420 1035 aaPredicted RBP21.79■■□□□ 1.08
PBX4-202ENST00000557978 ZNF853P0CG23 659 aa21.79■■□□□ 1.08
PBX4-202ENST00000557978 MTFR1LQ9H019 292 aa21.79■■□□□ 1.08
PBX4-202ENST00000557978 WDR63Q8IWG1 891 aa21.78■■□□□ 1.08
PBX4-202ENST00000557978 SPON1Q9HCB6 807 aa21.78■■□□□ 1.08
PBX4-202ENST00000557978 IL16Q14005 1332 aa21.77■■□□□ 1.08
PBX4-202ENST00000557978 SRCAPQ6ZRS2 3230 aa21.77■■□□□ 1.08
PBX4-202ENST00000557978 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
PBX4-202ENST00000557978 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
PBX4-202ENST00000557978 ZBTB1Q9Y2K1 713 aa21.77■■□□□ 1.08
PBX4-202ENST00000557978 ZBTB7AO95365 584 aa21.76■■□□□ 1.07
PBX4-202ENST00000557978 RFC4P35249 363 aa21.76■■□□□ 1.07
PBX4-202ENST00000557978 NPM2Q86SE8 214 aaKnown RBP21.76■■□□□ 1.07
PBX4-202ENST00000557978 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
PBX4-202ENST00000557978 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
PBX4-202ENST00000557978 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
PBX4-202ENST00000557978 SOS1Q07889 1333 aaPredicted RBP21.75■■□□□ 1.07
PBX4-202ENST00000557978 IL6STP40189 918 aaPredicted RBP21.74■■□□□ 1.07
PBX4-202ENST00000557978 CACNA1FO60840 1977 aa21.74■■□□□ 1.07
PBX4-202ENST00000557978 A1BGP04217 495 aa21.73■■□□□ 1.07
PBX4-202ENST00000557978 SMIM5Q71RC9 77 aa21.73■■□□□ 1.07
PBX4-202ENST00000557978 ATF5Q9Y2D1 282 aaPredicted RBP21.73■■□□□ 1.07
PBX4-202ENST00000557978 COL15A1P39059 1388 aa21.73■■□□□ 1.07
PBX4-202ENST00000557978 A0A087WZG4 1122 aa21.72■■□□□ 1.07
PBX4-202ENST00000557978 EIF5P55010 431 aaKnown RBP21.72■■□□□ 1.07
PBX4-202ENST00000557978 HOXB7P09629 217 aa21.72■■□□□ 1.07
PBX4-202ENST00000557978 ZPR1O75312 459 aa21.71■■□□□ 1.07
PBX4-202ENST00000557978 POLD1P28340 1107 aa21.7■■□□□ 1.06
PBX4-202ENST00000557978 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
PBX4-202ENST00000557978 ERBB4Q15303 1308 aa21.7■■□□□ 1.06
PBX4-202ENST00000557978 EIF2S2P20042 333 aaKnown RBP21.69■■□□□ 1.06
PBX4-202ENST00000557978 NLGN1Q8N2Q7 840 aa21.69■■□□□ 1.06
PBX4-202ENST00000557978 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
PBX4-202ENST00000557978 NARFQ9UHQ1 456 aa21.68■■□□□ 1.06
PBX4-202ENST00000557978 ZNF521Q96K83 1311 aa21.68■■□□□ 1.06
PBX4-202ENST00000557978 USP42Q9H9J4 1324 aaKnown RBP21.68■■□□□ 1.06
PBX4-202ENST00000557978 BCORQ6W2J9 1755 aa21.68■■□□□ 1.06
PBX4-202ENST00000557978 NUP98P52948 1817 aa21.67■■□□□ 1.06
PBX4-202ENST00000557978 KRT24Q2M2I5 525 aa21.67■■□□□ 1.06
PBX4-202ENST00000557978 DUSP27Q5VZP5 1158 aa21.67■■□□□ 1.06
PBX4-202ENST00000557978 TSR2Q969E8 191 aaKnown RBP21.67■■□□□ 1.06
PBX4-202ENST00000557978 MYH16Q9H6N6 1097 aa21.67■■□□□ 1.06
PBX4-202ENST00000557978 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 NBPF26B4DH59 902 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 GYS1P13807 737 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 PTGER2P43116 358 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 PIP4K2AP48426 406 aaPredicted RBP21.66■■□□□ 1.06
PBX4-202ENST00000557978 MSL1Q68DK7 614 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 NBPF10Q6P3W6 841 aaKnown RBP21.66■■□□□ 1.06
PBX4-202ENST00000557978 NBPF15Q8N660 670 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 SGIP1Q9BQI5 828 aa21.66■■□□□ 1.06
PBX4-202ENST00000557978 PPP1R1BQ9UD71 204 aaPredicted RBP21.66■■□□□ 1.06
PBX4-202ENST00000557978 GOLGA2Q08379 1002 aa21.65■■□□□ 1.06
PBX4-202ENST00000557978 USPL1Q5W0Q7 1092 aa21.65■■□□□ 1.06
PBX4-202ENST00000557978 ARXQ96QS3 562 aa21.65■■□□□ 1.06
PBX4-202ENST00000557978 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.06
PBX4-202ENST00000557978 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.06
PBX4-202ENST00000557978 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.06
PBX4-202ENST00000557978 SRP68Q9UHB9 627 aaKnown RBP21.64■■□□□ 1.06
PBX4-202ENST00000557978 ELL2O00472 640 aaPredicted RBP21.63■■□□□ 1.05
PBX4-202ENST00000557978 MYL6BP14649 208 aa21.63■■□□□ 1.05
PBX4-202ENST00000557978 TBC1D2BQ9UPU7 963 aa21.63■■□□□ 1.05
PBX4-202ENST00000557978 C8orf58Q8NAV2 365 aa21.63■■□□□ 1.05
PBX4-202ENST00000557978 NECTIN2Q92692 538 aa21.62■■□□□ 1.05
PBX4-202ENST00000557978 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
PBX4-202ENST00000557978 AFDNP55196 1824 aaKnown RBP21.61■■□□□ 1.05
PBX4-202ENST00000557978 E9PSI1 815 aa21.61■■□□□ 1.05
PBX4-202ENST00000557978 TWISTNBQ3B726 338 aaPredicted RBP21.61■■□□□ 1.05
PBX4-202ENST00000557978 SPINK5Q9NQ38 1064 aaPredicted RBP21.61■■□□□ 1.05
PBX4-202ENST00000557978 DDX21Q9NR30 783 aaKnown RBP eCLIP21.61■■□□□ 1.05
PBX4-202ENST00000557978 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
PBX4-202ENST00000557978 FKBP8Q14318 412 aa21.6■■□□□ 1.05
PBX4-202ENST00000557978 PDIA6Q15084 440 aa21.6■■□□□ 1.05
PBX4-202ENST00000557978 RGL2O15211 777 aa21.59■■□□□ 1.05
PBX4-202ENST00000557978 MMP10P09238 476 aa21.59■■□□□ 1.05
PBX4-202ENST00000557978 CCDC30Q5VVM6 783 aa21.59■■□□□ 1.05
PBX4-202ENST00000557978 CLEC4GQ6UXB4 293 aa21.59■■□□□ 1.05
PBX4-202ENST00000557978 TSPYL6Q8N831 410 aa21.59■■□□□ 1.05
PBX4-202ENST00000557978 ZNF652Q9Y2D9 606 aa21.59■■□□□ 1.05
PBX4-202ENST00000557978 CAMTA2O94983 1202 aa21.58■■□□□ 1.05
PBX4-202ENST00000557978 KIF6Q6ZMV9 814 aa21.58■■□□□ 1.05
PBX4-202ENST00000557978 CHPF2Q9P2E5 772 aa21.58■■□□□ 1.05
PBX4-202ENST00000557978 PARP3Q9Y6F1 533 aa21.58■■□□□ 1.05
PBX4-202ENST00000557978 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
PBX4-202ENST00000557978 SLFN5Q08AF3 891 aa21.57■■□□□ 1.04
PBX4-202ENST00000557978 BCL2L12Q9HB09 334 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms