RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 AMIGO3Q86WK7 504 aa33.25■■■□□ 2.91
SMAD6-202ENST00000557916 RTCBQ9Y3I0 505 aaKnown RBP33.25■■■□□ 2.91
SMAD6-202ENST00000557916 RPS6KA4O75676 772 aa33.24■■■□□ 2.91
SMAD6-202ENST00000557916 SMIM5Q71RC9 77 aa33.24■■■□□ 2.91
SMAD6-202ENST00000557916 FLAD1Q8NFF5 587 aa33.24■■■□□ 2.91
SMAD6-202ENST00000557916 PHF14O94880 888 aa33.23■■■□□ 2.91
SMAD6-202ENST00000557916 SSFA2P28290 1259 aa33.23■■■□□ 2.91
SMAD6-202ENST00000557916 TUBGCP6Q96RT7 1819 aa33.23■■■□□ 2.91
SMAD6-202ENST00000557916 MYH14Q7Z406 1995 aaKnown RBP33.22■■■□□ 2.91
SMAD6-202ENST00000557916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.22■■■□□ 2.91
SMAD6-202ENST00000557916 COL23A1Q86Y22 540 aaPredicted RBP33.22■■■□□ 2.91
SMAD6-202ENST00000557916 QSER1Q2KHR3 1735 aa33.22■■■□□ 2.91
SMAD6-202ENST00000557916 ZBTB1Q9Y2K1 713 aa33.21■■■□□ 2.91
SMAD6-202ENST00000557916 UBR3Q6ZT12 1888 aa33.21■■■□□ 2.91
SMAD6-202ENST00000557916 MSH5O43196 834 aa33.2■■■□□ 2.91
SMAD6-202ENST00000557916 CANXP27824 592 aaKnown RBP33.19■■■□□ 2.9
SMAD6-202ENST00000557916 ZNF521Q96K83 1311 aa33.19■■■□□ 2.9
SMAD6-202ENST00000557916 A1BGP04217 495 aa33.19■■■□□ 2.9
SMAD6-202ENST00000557916 KRT24Q2M2I5 525 aa33.19■■■□□ 2.9
SMAD6-202ENST00000557916 TRAPPC3LQ5T215 181 aa33.19■■■□□ 2.9
SMAD6-202ENST00000557916 TSR2Q969E8 191 aaKnown RBP33.19■■■□□ 2.9
SMAD6-202ENST00000557916 CASZ1Q86V15 1759 aa33.17■■■□□ 2.9
SMAD6-202ENST00000557916 ADRA2BP18089 450 aa33.17■■■□□ 2.9
SMAD6-202ENST00000557916 SOS1Q07889 1333 aaPredicted RBP33.16■■■□□ 2.9
SMAD6-202ENST00000557916 ARHGEF1Q92888 912 aaKnown RBP33.15■■■□□ 2.9
SMAD6-202ENST00000557916 ZBTB7AO95365 584 aa33.14■■■□□ 2.9
SMAD6-202ENST00000557916 SLC16A10Q8TF71 515 aa33.14■■■□□ 2.9
SMAD6-202ENST00000557916 SPINK5Q9NQ38 1064 aaPredicted RBP33.14■■■□□ 2.9
SMAD6-202ENST00000557916 LAMB4A4D0S4 1761 aa33.12■■■□□ 2.89
SMAD6-202ENST00000557916 EIF2S2P20042 333 aaKnown RBP33.12■■■□□ 2.89
SMAD6-202ENST00000557916 RFC4P35249 363 aa33.11■■■□□ 2.89
SMAD6-202ENST00000557916 IL6STP40189 918 aaPredicted RBP33.11■■■□□ 2.89
SMAD6-202ENST00000557916 PIP4K2AP48426 406 aaPredicted RBP33.11■■■□□ 2.89
SMAD6-202ENST00000557916 DUSP27Q5VZP5 1158 aa33.11■■■□□ 2.89
SMAD6-202ENST00000557916 HOXB7P09629 217 aa33.11■■■□□ 2.89
SMAD6-202ENST00000557916 EIF5P55010 431 aaKnown RBP33.11■■■□□ 2.89
SMAD6-202ENST00000557916 HNRNPUQ00839 825 aaKnown RBP eCLIP33.11■■■□□ 2.89
SMAD6-202ENST00000557916 GOLGA2Q08379 1002 aa33.11■■■□□ 2.89
SMAD6-202ENST00000557916 MTFR1LQ9H019 292 aa33.11■■■□□ 2.89
SMAD6-202ENST00000557916 MYH16Q9H6N6 1097 aa33.11■■■□□ 2.89
SMAD6-202ENST00000557916 ZNF330Q9Y3S2 320 aaPredicted RBP33.11■■■□□ 2.89
SMAD6-202ENST00000557916 FANCIQ9NVI1 1328 aa33.1■■■□□ 2.89
SMAD6-202ENST00000557916 C8orf58Q8NAV2 365 aa33.1■■■□□ 2.89
SMAD6-202ENST00000557916 COL15A1P39059 1388 aa33.1■■■□□ 2.89
SMAD6-202ENST00000557916 NBPF26B4DH59 902 aa33.09■■■□□ 2.89
SMAD6-202ENST00000557916 ELL2O00472 640 aaPredicted RBP33.09■■■□□ 2.89
SMAD6-202ENST00000557916 NBPF10Q6P3W6 841 aaKnown RBP33.09■■■□□ 2.89
SMAD6-202ENST00000557916 NBPF15Q8N660 670 aa33.09■■■□□ 2.89
SMAD6-202ENST00000557916 ATF5Q9Y2D1 282 aaPredicted RBP33.09■■■□□ 2.89
SMAD6-202ENST00000557916 NPM2Q86SE8 214 aaKnown RBP33.08■■■□□ 2.89
SMAD6-202ENST00000557916 NECTIN2Q92692 538 aa33.07■■■□□ 2.88
SMAD6-202ENST00000557916 SPON1Q9HCB6 807 aa33.07■■■□□ 2.88
SMAD6-202ENST00000557916 A0A087WZG4 1122 aa33.06■■■□□ 2.88
SMAD6-202ENST00000557916 ERBB4Q15303 1308 aa33.05■■■□□ 2.88
SMAD6-202ENST00000557916 HDGFL1Q5TGJ6 251 aa33.05■■■□□ 2.88
SMAD6-202ENST00000557916 TSPYL6Q8N831 410 aa33.04■■■□□ 2.88
SMAD6-202ENST00000557916 E9PSI1 815 aa33.03■■■□□ 2.88
SMAD6-202ENST00000557916 MSL1Q68DK7 614 aa33.03■■■□□ 2.88
SMAD6-202ENST00000557916 SRP68Q9UHB9 627 aaKnown RBP33.03■■■□□ 2.88
SMAD6-202ENST00000557916 USP42Q9H9J4 1324 aaKnown RBP33.03■■■□□ 2.88
SMAD6-202ENST00000557916 ZPR1O75312 459 aa33.02■■■□□ 2.88
SMAD6-202ENST00000557916 MYL6BP14649 208 aa33.02■■■□□ 2.88
SMAD6-202ENST00000557916 C4AP0C0L4 1744 aa33.02■■■□□ 2.88
SMAD6-202ENST00000557916 ARXQ96QS3 562 aa33.02■■■□□ 2.88
SMAD6-202ENST00000557916 NARFQ9UHQ1 456 aa33.02■■■□□ 2.88
SMAD6-202ENST00000557916 EXOSC9Q06265 439 aaKnown RBP33.01■■■□□ 2.87
SMAD6-202ENST00000557916 SLFN5Q08AF3 891 aa33.01■■■□□ 2.87
SMAD6-202ENST00000557916 PDIA6Q15084 440 aa33.01■■■□□ 2.87
SMAD6-202ENST00000557916 CDCA7LQ96GN5 454 aa33.01■■■□□ 2.87
SMAD6-202ENST00000557916 TBC1D2BQ9UPU7 963 aa33.01■■■□□ 2.87
SMAD6-202ENST00000557916 GYS1P13807 737 aa33■■■□□ 2.87
SMAD6-202ENST00000557916 TWISTNBQ3B726 338 aaPredicted RBP33■■■□□ 2.87
SMAD6-202ENST00000557916 USPL1Q5W0Q7 1092 aa32.99■■■□□ 2.87
SMAD6-202ENST00000557916 DZIP3Q86Y13 1208 aaKnown RBP32.98■■■□□ 2.87
SMAD6-202ENST00000557916 CHMP4AQ9BY43 222 aa32.98■■■□□ 2.87
SMAD6-202ENST00000557916 ANXA1P04083 346 aa32.97■■■□□ 2.87
SMAD6-202ENST00000557916 PTGER2P43116 358 aa32.97■■■□□ 2.87
SMAD6-202ENST00000557916 PROSER3Q2NL68 480 aa32.97■■■□□ 2.87
SMAD6-202ENST00000557916 NLGN1Q8N2Q7 840 aa32.97■■■□□ 2.87
SMAD6-202ENST00000557916 DDX21Q9NR30 783 aaKnown RBP eCLIP32.97■■■□□ 2.87
SMAD6-202ENST00000557916 CHPF2Q9P2E5 772 aa32.97■■■□□ 2.87
SMAD6-202ENST00000557916 DBF4Q9UBU7 674 aaPredicted RBP32.96■■■□□ 2.87
SMAD6-202ENST00000557916 POLD1P28340 1107 aa32.95■■■□□ 2.87
SMAD6-202ENST00000557916 SGIP1Q9BQI5 828 aa32.95■■■□□ 2.87
SMAD6-202ENST00000557916 FKBP8Q14318 412 aa32.94■■■□□ 2.86
SMAD6-202ENST00000557916 CCDC30Q5VVM6 783 aa32.94■■■□□ 2.86
SMAD6-202ENST00000557916 LRP10Q7Z4F1 713 aa32.94■■■□□ 2.86
SMAD6-202ENST00000557916 CAMTA2O94983 1202 aa32.93■■■□□ 2.86
SMAD6-202ENST00000557916 BCL2L12Q9HB09 334 aa32.93■■■□□ 2.86
SMAD6-202ENST00000557916 VAMP4O75379 141 aa32.92■■■□□ 2.86
SMAD6-202ENST00000557916 TRMT2AQ8IZ69 625 aaKnown RBP32.92■■■□□ 2.86
SMAD6-202ENST00000557916 ZBED9Q6R2W3 1325 aa32.92■■■□□ 2.86
SMAD6-202ENST00000557916 LRP5O75197 1615 aa32.91■■■□□ 2.86
SMAD6-202ENST00000557916 TTLL7Q6ZT98 887 aa32.91■■■□□ 2.86
SMAD6-202ENST00000557916 SRCAPQ6ZRS2 3230 aa32.9■■■□□ 2.86
SMAD6-202ENST00000557916 COL24A1Q17RW2 1714 aa32.9■■■□□ 2.86
SMAD6-202ENST00000557916 HYPKQ9NX55 129 aa32.9■■■□□ 2.86
SMAD6-202ENST00000557916 KIF6Q6ZMV9 814 aa32.89■■■□□ 2.86
SMAD6-202ENST00000557916 MMP10P09238 476 aa32.88■■■□□ 2.85
SMAD6-202ENST00000557916 COPS6Q7L5N1 327 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms