RNA–Protein interactions for RNA: ENST00000557889.1

CPNE6-205, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-205ENST00000557889 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.56
CPNE6-205ENST00000557889 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
CPNE6-205ENST00000557889 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
CPNE6-205ENST00000557889 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
CPNE6-205ENST00000557889 RFC4P35249 363 aa18.56■□□□□ 0.56
CPNE6-205ENST00000557889 ARXQ96QS3 562 aa18.56■□□□□ 0.56
CPNE6-205ENST00000557889 SOS1Q07889 1333 aaPredicted RBP18.55■□□□□ 0.56
CPNE6-205ENST00000557889 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
CPNE6-205ENST00000557889 ZBTB1Q9Y2K1 713 aa18.55■□□□□ 0.56
CPNE6-205ENST00000557889 TSPYL4Q9UJ04 414 aa18.54■□□□□ 0.56
CPNE6-205ENST00000557889 KDM3BQ7LBC6 1761 aa18.54■□□□□ 0.56
CPNE6-205ENST00000557889 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
CPNE6-205ENST00000557889 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
CPNE6-205ENST00000557889 PRAMEF22A3QJZ6 481 aa18.52■□□□□ 0.56
CPNE6-205ENST00000557889 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
CPNE6-205ENST00000557889 NLGN1Q8N2Q7 840 aa18.52■□□□□ 0.56
CPNE6-205ENST00000557889 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
CPNE6-205ENST00000557889 EIF5P55010 431 aaKnown RBP18.51■□□□□ 0.55
CPNE6-205ENST00000557889 USP42Q9H9J4 1324 aaKnown RBP18.5■□□□□ 0.55
CPNE6-205ENST00000557889 C4AP0C0L4 1744 aa18.5■□□□□ 0.55
CPNE6-205ENST00000557889 CHL1O00533 1208 aa18.5■□□□□ 0.55
CPNE6-205ENST00000557889 A1BGP04217 495 aa18.5■□□□□ 0.55
CPNE6-205ENST00000557889 GYS1P13807 737 aa18.5■□□□□ 0.55
CPNE6-205ENST00000557889 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
CPNE6-205ENST00000557889 CALD1Q05682 793 aaKnown RBP18.5■□□□□ 0.55
CPNE6-205ENST00000557889 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
CPNE6-205ENST00000557889 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
CPNE6-205ENST00000557889 COL15A1P39059 1388 aa18.5■□□□□ 0.55
CPNE6-205ENST00000557889 ZPR1O75312 459 aa18.49■□□□□ 0.55
CPNE6-205ENST00000557889 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
CPNE6-205ENST00000557889 A0A087WZG4 1122 aa18.48■□□□□ 0.55
CPNE6-205ENST00000557889 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
CPNE6-205ENST00000557889 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
CPNE6-205ENST00000557889 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
CPNE6-205ENST00000557889 SYT17Q9BSW7 474 aa18.48■□□□□ 0.55
CPNE6-205ENST00000557889 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
CPNE6-205ENST00000557889 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
CPNE6-205ENST00000557889 MMP10P09238 476 aa18.46■□□□□ 0.55
CPNE6-205ENST00000557889 USPL1Q5W0Q7 1092 aa18.46■□□□□ 0.55
CPNE6-205ENST00000557889 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
CPNE6-205ENST00000557889 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
CPNE6-205ENST00000557889 CCER2I3L3R5 266 aa18.45■□□□□ 0.54
CPNE6-205ENST00000557889 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
CPNE6-205ENST00000557889 FKBP8Q14318 412 aa18.45■□□□□ 0.54
CPNE6-205ENST00000557889 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
CPNE6-205ENST00000557889 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
CPNE6-205ENST00000557889 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
CPNE6-205ENST00000557889 GNAI1P63096 354 aa18.44■□□□□ 0.54
CPNE6-205ENST00000557889 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
CPNE6-205ENST00000557889 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
CPNE6-205ENST00000557889 WWC1Q8IX03 1113 aa18.44■□□□□ 0.54
CPNE6-205ENST00000557889 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
CPNE6-205ENST00000557889 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
CPNE6-205ENST00000557889 KLHL34Q8N239 644 aa18.43■□□□□ 0.54
CPNE6-205ENST00000557889 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
CPNE6-205ENST00000557889 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
CPNE6-205ENST00000557889 PARP3Q9Y6F1 533 aa18.43■□□□□ 0.54
CPNE6-205ENST00000557889 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
CPNE6-205ENST00000557889 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
CPNE6-205ENST00000557889 TBC1D2BQ9UPU7 963 aa18.42■□□□□ 0.54
CPNE6-205ENST00000557889 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
CPNE6-205ENST00000557889 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
CPNE6-205ENST00000557889 TM4SF1P30408 202 aa18.41■□□□□ 0.54
CPNE6-205ENST00000557889 DZIP3Q86Y13 1208 aaKnown RBP18.41■□□□□ 0.54
CPNE6-205ENST00000557889 HOXB7P09629 217 aa18.4■□□□□ 0.54
CPNE6-205ENST00000557889 CAMTA2O94983 1202 aa18.39■□□□□ 0.53
CPNE6-205ENST00000557889 EIF2S2P20042 333 aaKnown RBP18.39■□□□□ 0.53
CPNE6-205ENST00000557889 DDR1Q08345 913 aa18.39■□□□□ 0.53
CPNE6-205ENST00000557889 NFIXQ14938 502 aa18.39■□□□□ 0.53
CPNE6-205ENST00000557889 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
CPNE6-205ENST00000557889 IL16Q14005 1332 aa18.39■□□□□ 0.53
CPNE6-205ENST00000557889 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
CPNE6-205ENST00000557889 RGL2O15211 777 aa18.38■□□□□ 0.53
CPNE6-205ENST00000557889 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
CPNE6-205ENST00000557889 NLGN2Q8NFZ4 835 aa18.38■□□□□ 0.53
CPNE6-205ENST00000557889 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
CPNE6-205ENST00000557889 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
CPNE6-205ENST00000557889 CLEC4GQ6UXB4 293 aa18.37■□□□□ 0.53
CPNE6-205ENST00000557889 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
CPNE6-205ENST00000557889 MYL6BP14649 208 aa18.36■□□□□ 0.53
CPNE6-205ENST00000557889 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
CPNE6-205ENST00000557889 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
CPNE6-205ENST00000557889 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
CPNE6-205ENST00000557889 C10orf71Q711Q0 1435 aa18.35■□□□□ 0.53
CPNE6-205ENST00000557889 PDIA6Q15084 440 aa18.35■□□□□ 0.53
CPNE6-205ENST00000557889 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
CPNE6-205ENST00000557889 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 SERPINB2P05120 415 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 TGFB2P61812 414 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 LRP10Q7Z4F1 713 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 MIER1Q8N108 512 aa18.34■□□□□ 0.53
CPNE6-205ENST00000557889 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
CPNE6-205ENST00000557889 NECTIN2Q92692 538 aa18.33■□□□□ 0.52
CPNE6-205ENST00000557889 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
CPNE6-205ENST00000557889 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
CPNE6-205ENST00000557889 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.52
CPNE6-205ENST00000557889 KIF13BQ9NQT8 1826 aa18.33■□□□□ 0.52
CPNE6-205ENST00000557889 CARMIL3Q8ND23 1372 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms