RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ETNK1Q9HBU6 452 aa6.95□□□□□ -1.3
ATXN3-241ENST00000556374 ATXN7L1Q9ULK2 861 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-241ENST00000556374 SNAPC4Q5SXM2 1469 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 VAC14Q08AM6 782 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
ATXN3-241ENST00000556374 C4orf17Q53FE4 359 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 PODNQ7Z5L7 613 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 NLRP8Q86W28 1048 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 PLPP7Q8NBV4 271 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 RAB6BQ9NRW1 208 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
ATXN3-241ENST00000556374 ABCC8Q09428 1581 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 HECW2Q9P2P5 1572 aa6.94□□□□□ -1.3
ATXN3-241ENST00000556374 OIP5O43482 229 aa6.93□□□□□ -1.3
ATXN3-241ENST00000556374 MTFR1Q15390 333 aa6.93□□□□□ -1.3
ATXN3-241ENST00000556374 ACDQ96AP0 544 aa6.93□□□□□ -1.3
ATXN3-241ENST00000556374 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
ATXN3-241ENST00000556374 KDM6BO15054 1643 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 GPR25O00155 361 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 ABL2P42684 1182 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 SCNN1DP51172 638 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 SMTNP53814 917 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 GDF10P55107 478 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 FLIIQ13045 1269 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 TLR1Q15399 786 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 GOLGA6L1Q8N7Z2 621 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 OXCT2Q9BYC2 517 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-241ENST00000556374 NDFIP2Q9NV92 336 aa6.92□□□□□ -1.3
ATXN3-241ENST00000556374 MAGI1Q96QZ7 1491 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-241ENST00000556374 PIK3R2O00459 728 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 BACH1O14867 736 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 THBS1P07996 1170 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 MSX1P28360 303 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 TSGA10IPQ3SY00 556 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 OXLD1Q5BKU9 147 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 FAM182BQ5T319 152 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 TBC1D9Q6ZT07 1266 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 PCGF6Q9BYE7 350 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-241ENST00000556374 ZDHHC3Q9NYG2 299 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 COG6Q9Y2V7 657 aa6.91□□□□□ -1.3
ATXN3-241ENST00000556374 POLA1P09884 1462 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-241ENST00000556374 PBRM1Q86U86 1689 aa6.9□□□□□ -1.3
ATXN3-241ENST00000556374 EML3Q32P44 896 aa6.9□□□□□ -1.3
ATXN3-241ENST00000556374 NEDD1Q8NHV4 660 aa6.9□□□□□ -1.3
ATXN3-241ENST00000556374 ALG2Q9H553 416 aa6.9□□□□□ -1.3
ATXN3-241ENST00000556374 NBPF1Q3BBV0 1214 aa6.89□□□□□ -1.31
ATXN3-241ENST00000556374 KLRG1Q96E93 195 aa6.89□□□□□ -1.31
ATXN3-241ENST00000556374 GPC6Q9Y625 555 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-241ENST00000556374 DIP2BQ9P265 1576 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 SYNJ2O15056 1496 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 ARAFP10398 606 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 PHKA2P46019 1235 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 XP32Q5T750 250 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 ZNF295-AS1Q8N0V1 137 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 GPAMQ9HCL2 828 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 NOD1Q9Y239 953 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
ATXN3-241ENST00000556374 A6NJY4 79 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 TMEM229AB2RXF0 380 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 RAD21O60216 631 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 LAMC2Q13753 1193 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 SAMD5Q5TGI4 173 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 MKL2Q9ULH7 1088 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 IQSEC3Q9UPP2 1182 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-241ENST00000556374 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
ATXN3-241ENST00000556374 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-241ENST00000556374 FGFR3P22607 806 aa6.86□□□□□ -1.31
ATXN3-241ENST00000556374 EDARADDQ8WWZ3 215 aa6.86□□□□□ -1.31
ATXN3-241ENST00000556374 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
ATXN3-241ENST00000556374 ADGRL1O94910 1474 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 RAD54L2Q9Y4B4 1467 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 BNIP3LO60238 219 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 BMP4P12644 408 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 ATP4AP20648 1035 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 PLA2G4AP47712 749 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 PLEKHM2Q8IWE5 1019 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 GALNT6Q8NCL4 622 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 ZCCHC2Q9C0B9 1178 aaKnown RBP6.85□□□□□ -1.31
ATXN3-241ENST00000556374 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 CEP170Q5SW79 1584 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 TSPOAP1O95153 1857 aa6.85□□□□□ -1.31
ATXN3-241ENST00000556374 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 M0R2N6 131 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 FAM157BP0CG42 384 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 ATP1A2P50993 1020 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 TRIM26Q12899 539 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-241ENST00000556374 TEAD4Q15561 434 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 DCAF5Q96JK2 942 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 GRIN2BQ13224 1484 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 LMTK3Q96Q04 1460 aa6.84□□□□□ -1.31
ATXN3-241ENST00000556374 MAPKBP1O60336 1514 aa6.83□□□□□ -1.32
ATXN3-241ENST00000556374 MSTNO14793 375 aa6.83□□□□□ -1.32
ATXN3-241ENST00000556374 ATXN7O15265 892 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-241ENST00000556374 SKIP12755 728 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms