RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 TRAPPC3LQ5T215 181 aa26.82■■□□□ 1.88
FOXN3-209ENST00000555353 INTS5Q6P9B9 1019 aaKnown RBP26.82■■□□□ 1.88
FOXN3-209ENST00000555353 ADRA2BP18089 450 aa26.81■■□□□ 1.88
FOXN3-209ENST00000555353 BABAM1Q9NWV8 329 aa26.81■■□□□ 1.88
FOXN3-209ENST00000555353 LAS1LQ9Y4W2 734 aaKnown RBP26.8■■□□□ 1.88
FOXN3-209ENST00000555353 PPP1R1BQ9UD71 204 aaPredicted RBP26.79■■□□□ 1.88
FOXN3-209ENST00000555353 CALD1Q05682 793 aaKnown RBP26.78■■□□□ 1.88
FOXN3-209ENST00000555353 ZBTB1Q9Y2K1 713 aa26.78■■□□□ 1.88
FOXN3-209ENST00000555353 SENP3-EIF4A1A0A087X0R7 540 aa26.77■■□□□ 1.88
FOXN3-209ENST00000555353 RFC4P35249 363 aa26.77■■□□□ 1.88
FOXN3-209ENST00000555353 EIF4A1P60842 406 aaKnown RBP26.77■■□□□ 1.88
FOXN3-209ENST00000555353 ARHGEF1Q92888 912 aaKnown RBP26.77■■□□□ 1.88
FOXN3-209ENST00000555353 PTGER2P43116 358 aa26.76■■□□□ 1.87
FOXN3-209ENST00000555353 C4AP0C0L4 1744 aa26.76■■□□□ 1.87
FOXN3-209ENST00000555353 PRAMEF22A3QJZ6 481 aa26.75■■□□□ 1.87
FOXN3-209ENST00000555353 CANXP27824 592 aaKnown RBP26.75■■□□□ 1.87
FOXN3-209ENST00000555353 POLD1P28340 1107 aa26.75■■□□□ 1.87
FOXN3-209ENST00000555353 MSL1Q68DK7 614 aa26.75■■□□□ 1.87
FOXN3-209ENST00000555353 USP16Q9Y5T5 823 aa26.75■■□□□ 1.87
FOXN3-209ENST00000555353 SOS1Q07889 1333 aaPredicted RBP26.75■■□□□ 1.87
FOXN3-209ENST00000555353 CHL1O00533 1208 aa26.75■■□□□ 1.87
FOXN3-209ENST00000555353 COL24A1Q17RW2 1714 aa26.75■■□□□ 1.87
FOXN3-209ENST00000555353 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
FOXN3-209ENST00000555353 CFAP44Q96MT7 982 aa26.74■■□□□ 1.87
FOXN3-209ENST00000555353 GIGYF1O75420 1035 aaPredicted RBP26.73■■□□□ 1.87
FOXN3-209ENST00000555353 CCDC27Q2M243 656 aa26.73■■□□□ 1.87
FOXN3-209ENST00000555353 SGIP1Q9BQI5 828 aa26.73■■□□□ 1.87
FOXN3-209ENST00000555353 A1BGP04217 495 aa26.72■■□□□ 1.87
FOXN3-209ENST00000555353 COL15A1P39059 1388 aa26.72■■□□□ 1.87
FOXN3-209ENST00000555353 NCBP3Q53F19 620 aaKnown RBP26.71■■□□□ 1.87
FOXN3-209ENST00000555353 NPM2Q86SE8 214 aaKnown RBP26.71■■□□□ 1.87
FOXN3-209ENST00000555353 GNAI1P63096 354 aa26.71■■□□□ 1.87
FOXN3-209ENST00000555353 IFT57Q9NWB7 429 aa26.71■■□□□ 1.87
FOXN3-209ENST00000555353 ZNF330Q9Y3S2 320 aaPredicted RBP26.71■■□□□ 1.87
FOXN3-209ENST00000555353 WWC1Q8IX03 1113 aa26.7■■□□□ 1.86
FOXN3-209ENST00000555353 SALL2Q9Y467 1007 aaPredicted RBP26.7■■□□□ 1.86
FOXN3-209ENST00000555353 ZPR1O75312 459 aa26.69■■□□□ 1.86
FOXN3-209ENST00000555353 IL6STP40189 918 aaPredicted RBP26.69■■□□□ 1.86
FOXN3-209ENST00000555353 ARXQ96QS3 562 aa26.69■■□□□ 1.86
FOXN3-209ENST00000555353 EIF5P55010 431 aaKnown RBP26.68■■□□□ 1.86
FOXN3-209ENST00000555353 USP42Q9H9J4 1324 aaKnown RBP26.68■■□□□ 1.86
FOXN3-209ENST00000555353 A0A087WZG4 1122 aa26.67■■□□□ 1.86
FOXN3-209ENST00000555353 MBIPQ9NS73 344 aa26.67■■□□□ 1.86
FOXN3-209ENST00000555353 ZNF853P0CG23 659 aa26.67■■□□□ 1.86
FOXN3-209ENST00000555353 NLGN1Q8N2Q7 840 aa26.67■■□□□ 1.86
FOXN3-209ENST00000555353 NGEFQ8N5V2 710 aa26.67■■□□□ 1.86
FOXN3-209ENST00000555353 SRP68Q9UHB9 627 aaKnown RBP26.67■■□□□ 1.86
FOXN3-209ENST00000555353 GYS1P13807 737 aa26.66■■□□□ 1.86
FOXN3-209ENST00000555353 PIP4K2AP48426 406 aaPredicted RBP26.66■■□□□ 1.86
FOXN3-209ENST00000555353 NARFQ9UHQ1 456 aa26.65■■□□□ 1.86
FOXN3-209ENST00000555353 USPL1Q5W0Q7 1092 aa26.63■■□□□ 1.85
FOXN3-209ENST00000555353 YTHDC1Q96MU7 727 aaKnown RBP26.63■■□□□ 1.85
FOXN3-209ENST00000555353 HNRNPUQ00839 825 aaKnown RBP eCLIP26.63■■□□□ 1.85
FOXN3-209ENST00000555353 NBPF26B4DH59 902 aa26.62■■□□□ 1.85
FOXN3-209ENST00000555353 EIF2S2P20042 333 aaKnown RBP26.62■■□□□ 1.85
FOXN3-209ENST00000555353 KRT24Q2M2I5 525 aa26.62■■□□□ 1.85
FOXN3-209ENST00000555353 NBPF10Q6P3W6 841 aaKnown RBP26.62■■□□□ 1.85
FOXN3-209ENST00000555353 NBPF15Q8N660 670 aa26.62■■□□□ 1.85
FOXN3-209ENST00000555353 IL16Q14005 1332 aa26.61■■□□□ 1.85
FOXN3-209ENST00000555353 MMP10P09238 476 aa26.61■■□□□ 1.85
FOXN3-209ENST00000555353 KLHL34Q8N239 644 aa26.61■■□□□ 1.85
FOXN3-209ENST00000555353 TBC1D2BQ9UPU7 963 aa26.61■■□□□ 1.85
FOXN3-209ENST00000555353 FKBP8Q14318 412 aa26.6■■□□□ 1.85
FOXN3-209ENST00000555353 WDR63Q8IWG1 891 aa26.6■■□□□ 1.85
FOXN3-209ENST00000555353 FHDC1Q9C0D6 1143 aaPredicted RBP26.6■■□□□ 1.85
FOXN3-209ENST00000555353 ERBB4Q15303 1308 aa26.59■■□□□ 1.85
FOXN3-209ENST00000555353 HOXB7P09629 217 aa26.58■■□□□ 1.85
FOXN3-209ENST00000555353 DZIP3Q86Y13 1208 aaKnown RBP26.58■■□□□ 1.85
FOXN3-209ENST00000555353 DUSP27Q5VZP5 1158 aa26.58■■□□□ 1.85
FOXN3-209ENST00000555353 SCN7AQ01118 1682 aa26.57■■□□□ 1.84
FOXN3-209ENST00000555353 MYL6BP14649 208 aa26.57■■□□□ 1.84
FOXN3-209ENST00000555353 NECTIN2Q92692 538 aa26.57■■□□□ 1.84
FOXN3-209ENST00000555353 TSR2Q969E8 191 aaKnown RBP26.57■■□□□ 1.84
FOXN3-209ENST00000555353 PARP3Q9Y6F1 533 aa26.56■■□□□ 1.84
FOXN3-209ENST00000555353 HDGFL1Q5TGJ6 251 aa26.55■■□□□ 1.84
FOXN3-209ENST00000555353 SYT17Q9BSW7 474 aa26.55■■□□□ 1.84
FOXN3-209ENST00000555353 BCORQ6W2J9 1755 aa26.55■■□□□ 1.84
FOXN3-209ENST00000555353 BCL2L12Q9HB09 334 aa26.54■■□□□ 1.84
FOXN3-209ENST00000555353 CAMTA2O94983 1202 aa26.54■■□□□ 1.84
FOXN3-209ENST00000555353 ELL2O00472 640 aaPredicted RBP26.53■■□□□ 1.84
FOXN3-209ENST00000555353 TM4SF1P30408 202 aa26.51■■□□□ 1.83
FOXN3-209ENST00000555353 NFIXQ14938 502 aa26.51■■□□□ 1.83
FOXN3-209ENST00000555353 C8orf58Q8NAV2 365 aa26.51■■□□□ 1.83
FOXN3-209ENST00000555353 ZNF652Q9Y2D9 606 aa26.51■■□□□ 1.83
FOXN3-209ENST00000555353 PDIA6Q15084 440 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 KIF6Q6ZMV9 814 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 CD2APQ9Y5K6 639 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 FANCIQ9NVI1 1328 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 DDR1Q08345 913 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 PROSER3Q2NL68 480 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 BICDL1Q6ZP65 573 aa26.5■■□□□ 1.83
FOXN3-209ENST00000555353 DDX21Q9NR30 783 aaKnown RBP eCLIP26.5■■□□□ 1.83
FOXN3-209ENST00000555353 ANXA1P04083 346 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 CLEC4GQ6UXB4 293 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 CHMP4AQ9BY43 222 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 MYH16Q9H6N6 1097 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 CHPF2Q9P2E5 772 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 ZBED9Q6R2W3 1325 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 ZNF521Q96K83 1311 aa26.49■■□□□ 1.83
FOXN3-209ENST00000555353 POLRMTO00411 1230 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms