RNA–Protein interactions for RNA: ENST00000554232.5

UBR7-204, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 4

Gene UBR7, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-204ENST00000554232 ATF5Q9Y2D1 282 aaPredicted RBP27.31■■□□□ 1.96
UBR7-204ENST00000554232 SNRPA1P09661 255 aaKnown RBP27.3■■□□□ 1.96
UBR7-204ENST00000554232 CALD1Q05682 793 aaKnown RBP27.3■■□□□ 1.96
UBR7-204ENST00000554232 INTS5Q6P9B9 1019 aaKnown RBP27.3■■□□□ 1.96
UBR7-204ENST00000554232 TRAPPC3LQ5T215 181 aa27.29■■□□□ 1.96
UBR7-204ENST00000554232 SMIM5Q71RC9 77 aa27.28■■□□□ 1.96
UBR7-204ENST00000554232 ZBTB1Q9Y2K1 713 aa27.28■■□□□ 1.96
UBR7-204ENST00000554232 COL15A1P39059 1388 aa27.27■■□□□ 1.96
UBR7-204ENST00000554232 SOS1Q07889 1333 aaPredicted RBP27.27■■□□□ 1.96
UBR7-204ENST00000554232 SCN7AQ01118 1682 aa27.27■■□□□ 1.96
UBR7-204ENST00000554232 EIF4A1P60842 406 aaKnown RBP27.26■■□□□ 1.95
UBR7-204ENST00000554232 PPP1R1BQ9UD71 204 aaPredicted RBP27.26■■□□□ 1.95
UBR7-204ENST00000554232 LAS1LQ9Y4W2 734 aaKnown RBP27.26■■□□□ 1.95
UBR7-204ENST00000554232 BCORQ6W2J9 1755 aa27.25■■□□□ 1.95
UBR7-204ENST00000554232 POLD1P28340 1107 aa27.25■■□□□ 1.95
UBR7-204ENST00000554232 RFC4P35249 363 aa27.25■■□□□ 1.95
UBR7-204ENST00000554232 PTGER2P43116 358 aa27.25■■□□□ 1.95
UBR7-204ENST00000554232 CCDC27Q2M243 656 aa27.25■■□□□ 1.95
UBR7-204ENST00000554232 NCBP3Q53F19 620 aaKnown RBP27.25■■□□□ 1.95
UBR7-204ENST00000554232 ARHGEF1Q92888 912 aaKnown RBP27.24■■□□□ 1.95
UBR7-204ENST00000554232 CHL1O00533 1208 aa27.23■■□□□ 1.95
UBR7-204ENST00000554232 CANXP27824 592 aaKnown RBP27.23■■□□□ 1.95
UBR7-204ENST00000554232 MSL1Q68DK7 614 aa27.23■■□□□ 1.95
UBR7-204ENST00000554232 CFAP44Q96MT7 982 aa27.23■■□□□ 1.95
UBR7-204ENST00000554232 SGIP1Q9BQI5 828 aa27.23■■□□□ 1.95
UBR7-204ENST00000554232 PRAMEF22A3QJZ6 481 aa27.22■■□□□ 1.95
UBR7-204ENST00000554232 USP16Q9Y5T5 823 aa27.22■■□□□ 1.95
UBR7-204ENST00000554232 GIGYF1O75420 1035 aaPredicted RBP27.21■■□□□ 1.95
UBR7-204ENST00000554232 IFT57Q9NWB7 429 aa27.21■■□□□ 1.95
UBR7-204ENST00000554232 USP42Q9H9J4 1324 aaKnown RBP27.2■■□□□ 1.95
UBR7-204ENST00000554232 SENP3-EIF4A1A0A087X0R7 540 aa27.2■■□□□ 1.94
UBR7-204ENST00000554232 GNAI1P63096 354 aa27.2■■□□□ 1.94
UBR7-204ENST00000554232 IL6STP40189 918 aaPredicted RBP27.19■■□□□ 1.94
UBR7-204ENST00000554232 NPM2Q86SE8 214 aaKnown RBP27.19■■□□□ 1.94
UBR7-204ENST00000554232 NGEFQ8N5V2 710 aa27.19■■□□□ 1.94
UBR7-204ENST00000554232 A0A087WZG4 1122 aa27.18■■□□□ 1.94
UBR7-204ENST00000554232 A1BGP04217 495 aa27.18■■□□□ 1.94
UBR7-204ENST00000554232 WWC1Q8IX03 1113 aa27.18■■□□□ 1.94
UBR7-204ENST00000554232 ARXQ96QS3 562 aa27.18■■□□□ 1.94
UBR7-204ENST00000554232 ZNF330Q9Y3S2 320 aaPredicted RBP27.18■■□□□ 1.94
UBR7-204ENST00000554232 ZPR1O75312 459 aa27.17■■□□□ 1.94
UBR7-204ENST00000554232 EIF5P55010 431 aaKnown RBP27.17■■□□□ 1.94
UBR7-204ENST00000554232 ZNF853P0CG23 659 aa27.16■■□□□ 1.94
UBR7-204ENST00000554232 MIER1Q8N108 512 aa27.16■■□□□ 1.94
UBR7-204ENST00000554232 MBIPQ9NS73 344 aa27.16■■□□□ 1.94
UBR7-204ENST00000554232 GYS1P13807 737 aa27.15■■□□□ 1.94
UBR7-204ENST00000554232 NLGN1Q8N2Q7 840 aa27.15■■□□□ 1.94
UBR7-204ENST00000554232 SRP68Q9UHB9 627 aaKnown RBP27.15■■□□□ 1.94
UBR7-204ENST00000554232 NARFQ9UHQ1 456 aa27.14■■□□□ 1.94
UBR7-204ENST00000554232 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.94
UBR7-204ENST00000554232 IL16Q14005 1332 aa27.14■■□□□ 1.93
UBR7-204ENST00000554232 SRCAPQ6ZRS2 3230 aa27.13■■□□□ 1.93
UBR7-204ENST00000554232 ERBB4Q15303 1308 aa27.13■■□□□ 1.93
UBR7-204ENST00000554232 KIF13BQ9NQT8 1826 aa27.12■■□□□ 1.93
UBR7-204ENST00000554232 PIP4K2AP48426 406 aaPredicted RBP27.12■■□□□ 1.93
UBR7-204ENST00000554232 USPL1Q5W0Q7 1092 aa27.12■■□□□ 1.93
UBR7-204ENST00000554232 HOXB7P09629 217 aa27.11■■□□□ 1.93
UBR7-204ENST00000554232 AFDNP55196 1824 aaKnown RBP27.11■■□□□ 1.93
UBR7-204ENST00000554232 NBPF26B4DH59 902 aa27.1■■□□□ 1.93
UBR7-204ENST00000554232 NBPF10Q6P3W6 841 aaKnown RBP27.1■■□□□ 1.93
UBR7-204ENST00000554232 NBPF15Q8N660 670 aa27.1■■□□□ 1.93
UBR7-204ENST00000554232 MMP10P09238 476 aa27.09■■□□□ 1.93
UBR7-204ENST00000554232 KRT24Q2M2I5 525 aa27.09■■□□□ 1.93
UBR7-204ENST00000554232 WDR63Q8IWG1 891 aa27.09■■□□□ 1.93
UBR7-204ENST00000554232 NUP98P52948 1817 aa27.09■■□□□ 1.93
UBR7-204ENST00000554232 EIF2S2P20042 333 aaKnown RBP27.08■■□□□ 1.93
UBR7-204ENST00000554232 DZIP3Q86Y13 1208 aaKnown RBP27.08■■□□□ 1.93
UBR7-204ENST00000554232 FHDC1Q9C0D6 1143 aaPredicted RBP27.08■■□□□ 1.93
UBR7-204ENST00000554232 FKBP8Q14318 412 aa27.07■■□□□ 1.92
UBR7-204ENST00000554232 KLHL34Q8N239 644 aa27.07■■□□□ 1.92
UBR7-204ENST00000554232 NRXN2Q9P2S2 1712 aa27.07■■□□□ 1.92
UBR7-204ENST00000554232 TBC1D2BQ9UPU7 963 aa27.06■■□□□ 1.92
UBR7-204ENST00000554232 HDGFL1Q5TGJ6 251 aa27.05■■□□□ 1.92
UBR7-204ENST00000554232 DUSP27Q5VZP5 1158 aa27.05■■□□□ 1.92
UBR7-204ENST00000554232 PARP3Q9Y6F1 533 aa27.05■■□□□ 1.92
UBR7-204ENST00000554232 ANKRD36CQ5JPF3 1778 aa27.04■■□□□ 1.92
UBR7-204ENST00000554232 MYL6BP14649 208 aa27.04■■□□□ 1.92
UBR7-204ENST00000554232 TSR2Q969E8 191 aaKnown RBP27.04■■□□□ 1.92
UBR7-204ENST00000554232 BCL2L12Q9HB09 334 aa27.04■■□□□ 1.92
UBR7-204ENST00000554232 CACNA1FO60840 1977 aa27.03■■□□□ 1.92
UBR7-204ENST00000554232 CAMTA2O94983 1202 aa27.03■■□□□ 1.92
UBR7-204ENST00000554232 FANCIQ9NVI1 1328 aa27.02■■□□□ 1.92
UBR7-204ENST00000554232 NECTIN2Q92692 538 aa27.02■■□□□ 1.92
UBR7-204ENST00000554232 ZNF652Q9Y2D9 606 aa27.02■■□□□ 1.92
UBR7-204ENST00000554232 RGL2O15211 777 aa27.01■■□□□ 1.91
UBR7-204ENST00000554232 KIF6Q6ZMV9 814 aa27.01■■□□□ 1.91
UBR7-204ENST00000554232 SYT17Q9BSW7 474 aa27.01■■□□□ 1.91
UBR7-204ENST00000554232 C10orf71Q711Q0 1435 aa27■■□□□ 1.91
UBR7-204ENST00000554232 ZNF521Q96K83 1311 aa27■■□□□ 1.91
UBR7-204ENST00000554232 KIAA1551Q9HCM1 1747 aa27■■□□□ 1.91
UBR7-204ENST00000554232 CHMP4AQ9BY43 222 aa27■■□□□ 1.91
UBR7-204ENST00000554232 MYH16Q9H6N6 1097 aa27■■□□□ 1.91
UBR7-204ENST00000554232 DDR1Q08345 913 aa26.99■■□□□ 1.91
UBR7-204ENST00000554232 NFIXQ14938 502 aa26.99■■□□□ 1.91
UBR7-204ENST00000554232 CD2APQ9Y5K6 639 aa26.99■■□□□ 1.91
UBR7-204ENST00000554232 POLRMTO00411 1230 aaKnown RBP26.98■■□□□ 1.91
UBR7-204ENST00000554232 TM4SF1P30408 202 aa26.98■■□□□ 1.91
UBR7-204ENST00000554232 PDIA6Q15084 440 aa26.98■■□□□ 1.91
UBR7-204ENST00000554232 CLEC4GQ6UXB4 293 aa26.98■■□□□ 1.91
UBR7-204ENST00000554232 DDX21Q9NR30 783 aaKnown RBP eCLIP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms