RNA–Protein interactions for RNA: ENST00000552763.1

MMP19-208, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-208ENST00000552763 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
MMP19-208ENST00000552763 IFT57Q9NWB7 429 aa25.17■■□□□ 1.62
MMP19-208ENST00000552763 USP16Q9Y5T5 823 aa25.17■■□□□ 1.62
MMP19-208ENST00000552763 GIGYF1O75420 1035 aaPredicted RBP25.16■■□□□ 1.62
MMP19-208ENST00000552763 COL5A3P25940 1745 aaPredicted RBP25.16■■□□□ 1.62
MMP19-208ENST00000552763 GNAI1P63096 354 aa25.16■■□□□ 1.62
MMP19-208ENST00000552763 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
MMP19-208ENST00000552763 ZBTB7AO95365 584 aa25.15■■□□□ 1.62
MMP19-208ENST00000552763 SLC16A10Q8TF71 515 aa25.15■■□□□ 1.62
MMP19-208ENST00000552763 KDM3BQ7LBC6 1761 aa25.15■■□□□ 1.62
MMP19-208ENST00000552763 SRCAPQ6ZRS2 3230 aa25.14■■□□□ 1.62
MMP19-208ENST00000552763 ZBTB1Q9Y2K1 713 aa25.14■■□□□ 1.62
MMP19-208ENST00000552763 MYH14Q7Z406 1995 aaKnown RBP25.13■■□□□ 1.61
MMP19-208ENST00000552763 A1BGP04217 495 aa25.13■■□□□ 1.61
MMP19-208ENST00000552763 ADRA2BP18089 450 aa25.13■■□□□ 1.61
MMP19-208ENST00000552763 ARHGEF1Q92888 912 aaKnown RBP25.13■■□□□ 1.61
MMP19-208ENST00000552763 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
MMP19-208ENST00000552763 QSER1Q2KHR3 1735 aa25.12■■□□□ 1.61
MMP19-208ENST00000552763 CANXP27824 592 aaKnown RBP25.12■■□□□ 1.61
MMP19-208ENST00000552763 WDR63Q8IWG1 891 aa25.12■■□□□ 1.61
MMP19-208ENST00000552763 MTFR1LQ9H019 292 aa25.12■■□□□ 1.61
MMP19-208ENST00000552763 SPON1Q9HCB6 807 aa25.12■■□□□ 1.61
MMP19-208ENST00000552763 ATF5Q9Y2D1 282 aaPredicted RBP25.12■■□□□ 1.61
MMP19-208ENST00000552763 CASZ1Q86V15 1759 aa25.12■■□□□ 1.61
MMP19-208ENST00000552763 TUBGCP6Q96RT7 1819 aa25.12■■□□□ 1.61
MMP19-208ENST00000552763 UBR3Q6ZT12 1888 aa25.11■■□□□ 1.61
MMP19-208ENST00000552763 IL16Q14005 1332 aa25.11■■□□□ 1.61
MMP19-208ENST00000552763 SOS1Q07889 1333 aaPredicted RBP25.1■■□□□ 1.61
MMP19-208ENST00000552763 RFC4P35249 363 aa25.09■■□□□ 1.61
MMP19-208ENST00000552763 EIF5P55010 431 aaKnown RBP25.08■■□□□ 1.61
MMP19-208ENST00000552763 KRT24Q2M2I5 525 aa25.08■■□□□ 1.61
MMP19-208ENST00000552763 IL6STP40189 918 aaPredicted RBP25.06■■□□□ 1.6
MMP19-208ENST00000552763 PIP4K2AP48426 406 aaPredicted RBP25.05■■□□□ 1.6
MMP19-208ENST00000552763 TSR2Q969E8 191 aaKnown RBP25.05■■□□□ 1.6
MMP19-208ENST00000552763 NBPF26B4DH59 902 aa25.04■■□□□ 1.6
MMP19-208ENST00000552763 EIF2S2P20042 333 aaKnown RBP25.04■■□□□ 1.6
MMP19-208ENST00000552763 PTGER2P43116 358 aa25.04■■□□□ 1.6
MMP19-208ENST00000552763 MSL1Q68DK7 614 aa25.04■■□□□ 1.6
MMP19-208ENST00000552763 NBPF10Q6P3W6 841 aaKnown RBP25.04■■□□□ 1.6
MMP19-208ENST00000552763 NBPF15Q8N660 670 aa25.04■■□□□ 1.6
MMP19-208ENST00000552763 ZNF521Q96K83 1311 aa25.04■■□□□ 1.6
MMP19-208ENST00000552763 A0A087WZG4 1122 aa25.03■■□□□ 1.6
MMP19-208ENST00000552763 DUSP27Q5VZP5 1158 aa25.03■■□□□ 1.6
MMP19-208ENST00000552763 SGIP1Q9BQI5 828 aa25.03■■□□□ 1.6
MMP19-208ENST00000552763 ZNF330Q9Y3S2 320 aaPredicted RBP25.03■■□□□ 1.6
MMP19-208ENST00000552763 COL15A1P39059 1388 aa25.03■■□□□ 1.6
MMP19-208ENST00000552763 ZPR1O75312 459 aa25.02■■□□□ 1.6
MMP19-208ENST00000552763 HOXB7P09629 217 aa25.02■■□□□ 1.6
MMP19-208ENST00000552763 NPM2Q86SE8 214 aaKnown RBP25.02■■□□□ 1.6
MMP19-208ENST00000552763 SPINK5Q9NQ38 1064 aaPredicted RBP25.02■■□□□ 1.6
MMP19-208ENST00000552763 SRP68Q9UHB9 627 aaKnown RBP25.02■■□□□ 1.6
MMP19-208ENST00000552763 GYS1P13807 737 aa25.01■■□□□ 1.59
MMP19-208ENST00000552763 C8orf58Q8NAV2 365 aa25.01■■□□□ 1.59
MMP19-208ENST00000552763 NARFQ9UHQ1 456 aa25.01■■□□□ 1.59
MMP19-208ENST00000552763 USP42Q9H9J4 1324 aaKnown RBP25.01■■□□□ 1.59
MMP19-208ENST00000552763 ELL2O00472 640 aaPredicted RBP25■■□□□ 1.59
MMP19-208ENST00000552763 POLD1P28340 1107 aa25■■□□□ 1.59
MMP19-208ENST00000552763 NLGN1Q8N2Q7 840 aa25■■□□□ 1.59
MMP19-208ENST00000552763 ERBB4Q15303 1308 aa24.99■■□□□ 1.59
MMP19-208ENST00000552763 USPL1Q5W0Q7 1092 aa24.99■■□□□ 1.59
MMP19-208ENST00000552763 NECTIN2Q92692 538 aa24.99■■□□□ 1.59
MMP19-208ENST00000552763 ARXQ96QS3 562 aa24.99■■□□□ 1.59
MMP19-208ENST00000552763 TBC1D2BQ9UPU7 963 aa24.99■■□□□ 1.59
MMP19-208ENST00000552763 FANCIQ9NVI1 1328 aa24.98■■□□□ 1.59
MMP19-208ENST00000552763 MYH16Q9H6N6 1097 aa24.98■■□□□ 1.59
MMP19-208ENST00000552763 MYL6BP14649 208 aa24.97■■□□□ 1.59
MMP19-208ENST00000552763 GOLGA2Q08379 1002 aa24.97■■□□□ 1.59
MMP19-208ENST00000552763 PDIA6Q15084 440 aa24.97■■□□□ 1.59
MMP19-208ENST00000552763 HDGFL1Q5TGJ6 251 aa24.97■■□□□ 1.59
MMP19-208ENST00000552763 FKBP8Q14318 412 aa24.96■■□□□ 1.59
MMP19-208ENST00000552763 DZIP3Q86Y13 1208 aaKnown RBP24.96■■□□□ 1.59
MMP19-208ENST00000552763 TSPYL6Q8N831 410 aa24.96■■□□□ 1.59
MMP19-208ENST00000552763 PPP1R1BQ9UD71 204 aaPredicted RBP24.96■■□□□ 1.59
MMP19-208ENST00000552763 LRP5O75197 1615 aa24.96■■□□□ 1.59
MMP19-208ENST00000552763 LAMB4A4D0S4 1761 aa24.95■■□□□ 1.59
MMP19-208ENST00000552763 BCL2L12Q9HB09 334 aa24.94■■□□□ 1.58
MMP19-208ENST00000552763 CAMTA2O94983 1202 aa24.93■■□□□ 1.58
MMP19-208ENST00000552763 PROSER3Q2NL68 480 aa24.93■■□□□ 1.58
MMP19-208ENST00000552763 DDX21Q9NR30 783 aaKnown RBP eCLIP24.93■■□□□ 1.58
MMP19-208ENST00000552763 C4AP0C0L4 1744 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 E9PSI1 815 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 ANXA1P04083 346 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 MMP10P09238 476 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 EXOSC9Q06265 439 aaKnown RBP24.92■■□□□ 1.58
MMP19-208ENST00000552763 TWISTNBQ3B726 338 aaPredicted RBP24.92■■□□□ 1.58
MMP19-208ENST00000552763 LRP10Q7Z4F1 713 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 CHMP4AQ9BY43 222 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 CHPF2Q9P2E5 772 aa24.92■■□□□ 1.58
MMP19-208ENST00000552763 DBF4Q9UBU7 674 aaPredicted RBP24.92■■□□□ 1.58
MMP19-208ENST00000552763 HNRNPUQ00839 825 aaKnown RBP eCLIP24.91■■□□□ 1.58
MMP19-208ENST00000552763 SLFN5Q08AF3 891 aa24.91■■□□□ 1.58
MMP19-208ENST00000552763 COL24A1Q17RW2 1714 aa24.91■■□□□ 1.58
MMP19-208ENST00000552763 TM4SF1P30408 202 aa24.9■■□□□ 1.58
MMP19-208ENST00000552763 TTLL7Q6ZT98 887 aa24.9■■□□□ 1.58
MMP19-208ENST00000552763 CDCA7LQ96GN5 454 aa24.9■■□□□ 1.58
MMP19-208ENST00000552763 CCDC30Q5VVM6 783 aa24.89■■□□□ 1.58
MMP19-208ENST00000552763 VAMP4O75379 141 aa24.87■■□□□ 1.57
MMP19-208ENST00000552763 NFIXQ14938 502 aa24.87■■□□□ 1.57
MMP19-208ENST00000552763 CLEC4GQ6UXB4 293 aa24.87■■□□□ 1.57
MMP19-208ENST00000552763 KIF6Q6ZMV9 814 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms