RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 INTS5Q6P9B9 1019 aaKnown RBP35.2■■■■□ 3.23
CHPT1-210ENST00000552351 IFT57Q9NWB7 429 aa35.2■■■■□ 3.23
CHPT1-210ENST00000552351 LRP5O75197 1615 aa35.19■■■■□ 3.22
CHPT1-210ENST00000552351 COL23A1Q86Y22 540 aaPredicted RBP35.19■■■■□ 3.22
CHPT1-210ENST00000552351 MTFR1LQ9H019 292 aa35.18■■■■□ 3.22
CHPT1-210ENST00000552351 GNAI1P63096 354 aa35.17■■■■□ 3.22
CHPT1-210ENST00000552351 ZNF853P0CG23 659 aa35.16■■■■□ 3.22
CHPT1-210ENST00000552351 AMIGO3Q86WK7 504 aa35.16■■■■□ 3.22
CHPT1-210ENST00000552351 GIGYF1O75420 1035 aaPredicted RBP35.16■■■■□ 3.22
CHPT1-210ENST00000552351 TRAPPC3LQ5T215 181 aa35.15■■■■□ 3.22
CHPT1-210ENST00000552351 SPON1Q9HCB6 807 aa35.15■■■■□ 3.22
CHPT1-210ENST00000552351 LAS1LQ9Y4W2 734 aaKnown RBP35.15■■■■□ 3.22
CHPT1-210ENST00000552351 IL16Q14005 1332 aa35.14■■■■□ 3.22
CHPT1-210ENST00000552351 PHF14O94880 888 aa35.14■■■■□ 3.22
CHPT1-210ENST00000552351 COL24A1Q17RW2 1714 aa35.14■■■■□ 3.22
CHPT1-210ENST00000552351 MSH5O43196 834 aa35.12■■■■□ 3.21
CHPT1-210ENST00000552351 ZBTB1Q9Y2K1 713 aa35.12■■■■□ 3.21
CHPT1-210ENST00000552351 USP16Q9Y5T5 823 aa35.12■■■■□ 3.21
CHPT1-210ENST00000552351 SRCAPQ6ZRS2 3230 aa35.12■■■■□ 3.21
CHPT1-210ENST00000552351 C4AP0C0L4 1744 aa35.12■■■■□ 3.21
CHPT1-210ENST00000552351 SOS1Q07889 1333 aaPredicted RBP35.12■■■■□ 3.21
CHPT1-210ENST00000552351 ZBTB7AO95365 584 aa35.11■■■■□ 3.21
CHPT1-210ENST00000552351 WDR63Q8IWG1 891 aa35.11■■■■□ 3.21
CHPT1-210ENST00000552351 PRAMEF22A3QJZ6 481 aa35.1■■■■□ 3.21
CHPT1-210ENST00000552351 MBIPQ9NS73 344 aa35.1■■■■□ 3.21
CHPT1-210ENST00000552351 SENP3-EIF4A1A0A087X0R7 540 aa35.09■■■■□ 3.21
CHPT1-210ENST00000552351 ARHGEF1Q92888 912 aaKnown RBP35.09■■■■□ 3.21
CHPT1-210ENST00000552351 RFC4P35249 363 aa35.07■■■■□ 3.21
CHPT1-210ENST00000552351 IL6STP40189 918 aaPredicted RBP35.07■■■■□ 3.21
CHPT1-210ENST00000552351 SALL2Q9Y467 1007 aaPredicted RBP35.06■■■■□ 3.2
CHPT1-210ENST00000552351 COL15A1P39059 1388 aa35.06■■■■□ 3.2
CHPT1-210ENST00000552351 CANXP27824 592 aaKnown RBP35.06■■■■□ 3.2
CHPT1-210ENST00000552351 EIF5P55010 431 aaKnown RBP35.06■■■■□ 3.2
CHPT1-210ENST00000552351 SMIM5Q71RC9 77 aa35.06■■■■□ 3.2
CHPT1-210ENST00000552351 HOXB7P09629 217 aa35.05■■■■□ 3.2
CHPT1-210ENST00000552351 A1BGP04217 495 aa35.04■■■■□ 3.2
CHPT1-210ENST00000552351 ATF5Q9Y2D1 282 aaPredicted RBP35.04■■■■□ 3.2
CHPT1-210ENST00000552351 ERBB4Q15303 1308 aa35.03■■■■□ 3.2
CHPT1-210ENST00000552351 A0A087WZG4 1122 aa35.02■■■■□ 3.2
CHPT1-210ENST00000552351 PTGER2P43116 358 aa35.02■■■■□ 3.2
CHPT1-210ENST00000552351 SGIP1Q9BQI5 828 aa35.02■■■■□ 3.2
CHPT1-210ENST00000552351 ZNF521Q96K83 1311 aa35.01■■■■□ 3.2
CHPT1-210ENST00000552351 USP42Q9H9J4 1324 aaKnown RBP35.01■■■■□ 3.2
CHPT1-210ENST00000552351 NPM2Q86SE8 214 aaKnown RBP35.01■■■■□ 3.19
CHPT1-210ENST00000552351 POLD1P28340 1107 aa34.98■■■■□ 3.19
CHPT1-210ENST00000552351 NLGN1Q8N2Q7 840 aa34.98■■■■□ 3.19
CHPT1-210ENST00000552351 NBPF26B4DH59 902 aa34.97■■■■□ 3.19
CHPT1-210ENST00000552351 NBPF10Q6P3W6 841 aaKnown RBP34.97■■■■□ 3.19
CHPT1-210ENST00000552351 NBPF15Q8N660 670 aa34.97■■■■□ 3.19
CHPT1-210ENST00000552351 NARFQ9UHQ1 456 aa34.97■■■■□ 3.19
CHPT1-210ENST00000552351 ZPR1O75312 459 aa34.96■■■■□ 3.19
CHPT1-210ENST00000552351 KRT24Q2M2I5 525 aa34.96■■■■□ 3.19
CHPT1-210ENST00000552351 GYS1P13807 737 aa34.95■■■■□ 3.19
CHPT1-210ENST00000552351 DUSP27Q5VZP5 1158 aa34.95■■■■□ 3.19
CHPT1-210ENST00000552351 CHMP4AQ9BY43 222 aa34.94■■■■□ 3.18
CHPT1-210ENST00000552351 SCN7AQ01118 1682 aa34.93■■■■□ 3.18
CHPT1-210ENST00000552351 MSL1Q68DK7 614 aa34.93■■■■□ 3.18
CHPT1-210ENST00000552351 TSR2Q969E8 191 aaKnown RBP34.93■■■■□ 3.18
CHPT1-210ENST00000552351 MYH16Q9H6N6 1097 aa34.93■■■■□ 3.18
CHPT1-210ENST00000552351 ZNF330Q9Y3S2 320 aaPredicted RBP34.93■■■■□ 3.18
CHPT1-210ENST00000552351 EIF2S2P20042 333 aaKnown RBP34.92■■■■□ 3.18
CHPT1-210ENST00000552351 FANCIQ9NVI1 1328 aa34.92■■■■□ 3.18
CHPT1-210ENST00000552351 SRP68Q9UHB9 627 aaKnown RBP34.91■■■■□ 3.18
CHPT1-210ENST00000552351 PIP4K2AP48426 406 aaPredicted RBP34.91■■■■□ 3.18
CHPT1-210ENST00000552351 PPP1R1BQ9UD71 204 aaPredicted RBP34.91■■■■□ 3.18
CHPT1-210ENST00000552351 BCORQ6W2J9 1755 aa34.9■■■■□ 3.18
CHPT1-210ENST00000552351 GOLGA2Q08379 1002 aa34.9■■■■□ 3.18
CHPT1-210ENST00000552351 HDGFL1Q5TGJ6 251 aa34.9■■■■□ 3.18
CHPT1-210ENST00000552351 USPL1Q5W0Q7 1092 aa34.9■■■■□ 3.18
CHPT1-210ENST00000552351 RGL2O15211 777 aa34.89■■■■□ 3.18
CHPT1-210ENST00000552351 ARXQ96QS3 562 aa34.89■■■■□ 3.18
CHPT1-210ENST00000552351 DZIP3Q86Y13 1208 aaKnown RBP34.88■■■■□ 3.17
CHPT1-210ENST00000552351 C8orf58Q8NAV2 365 aa34.88■■■■□ 3.17
CHPT1-210ENST00000552351 PDIA6Q15084 440 aa34.86■■■■□ 3.17
CHPT1-210ENST00000552351 SPINK5Q9NQ38 1064 aaPredicted RBP34.86■■■■□ 3.17
CHPT1-210ENST00000552351 TBC1D2BQ9UPU7 963 aa34.86■■■■□ 3.17
CHPT1-210ENST00000552351 DDX21Q9NR30 783 aaKnown RBP eCLIP34.86■■■■□ 3.17
CHPT1-210ENST00000552351 FKBP8Q14318 412 aa34.85■■■■□ 3.17
CHPT1-210ENST00000552351 DBF4Q9UBU7 674 aaPredicted RBP34.85■■■■□ 3.17
CHPT1-210ENST00000552351 E9PSI1 815 aa34.84■■■■□ 3.17
CHPT1-210ENST00000552351 CAMTA2O94983 1202 aa34.84■■■■□ 3.17
CHPT1-210ENST00000552351 MMP10P09238 476 aa34.84■■■■□ 3.17
CHPT1-210ENST00000552351 MYL6BP14649 208 aa34.84■■■■□ 3.17
CHPT1-210ENST00000552351 BCL2L12Q9HB09 334 aa34.84■■■■□ 3.17
CHPT1-210ENST00000552351 ELL2O00472 640 aaPredicted RBP34.83■■■■□ 3.17
CHPT1-210ENST00000552351 LRP10Q7Z4F1 713 aa34.83■■■■□ 3.17
CHPT1-210ENST00000552351 CLEC4GQ6UXB4 293 aa34.82■■■■□ 3.16
CHPT1-210ENST00000552351 TWISTNBQ3B726 338 aaPredicted RBP34.81■■■■□ 3.16
CHPT1-210ENST00000552351 NECTIN2Q92692 538 aa34.81■■■■□ 3.16
CHPT1-210ENST00000552351 ZNF652Q9Y2D9 606 aa34.81■■■■□ 3.16
CHPT1-210ENST00000552351 TSPYL6Q8N831 410 aa34.81■■■■□ 3.16
CHPT1-210ENST00000552351 CHPF2Q9P2E5 772 aa34.81■■■■□ 3.16
CHPT1-210ENST00000552351 TM4SF1P30408 202 aa34.8■■■■□ 3.16
CHPT1-210ENST00000552351 CCDC30Q5VVM6 783 aa34.8■■■■□ 3.16
CHPT1-210ENST00000552351 ERVV-1B6SEH8 477 aa34.79■■■■□ 3.16
CHPT1-210ENST00000552351 PROSER3Q2NL68 480 aa34.79■■■■□ 3.16
CHPT1-210ENST00000552351 KIF6Q6ZMV9 814 aa34.79■■■■□ 3.16
CHPT1-210ENST00000552351 HYPKQ9NX55 129 aa34.78■■■■□ 3.16
CHPT1-210ENST00000552351 PARP3Q9Y6F1 533 aa34.78■■■■□ 3.16
CHPT1-210ENST00000552351 EXOSC9Q06265 439 aaKnown RBP34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms