RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PNISRQ8TF01 805 aaKnown RBP24.64■■□□□ 1.54
PRPF40B-206ENST00000547764 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.54
PRPF40B-206ENST00000547764 ZBTB1Q9Y2K1 713 aa24.63■■□□□ 1.53
PRPF40B-206ENST00000547764 RFC4P35249 363 aa24.62■■□□□ 1.53
PRPF40B-206ENST00000547764 TRIM35Q9UPQ4 493 aa24.62■■□□□ 1.53
PRPF40B-206ENST00000547764 FHDC1Q9C0D6 1143 aaPredicted RBP24.61■■□□□ 1.53
PRPF40B-206ENST00000547764 SOS1Q07889 1333 aaPredicted RBP24.61■■□□□ 1.53
PRPF40B-206ENST00000547764 APAF1O14727 1248 aa24.6■■□□□ 1.53
PRPF40B-206ENST00000547764 SNRPA1P09661 255 aaKnown RBP24.6■■□□□ 1.53
PRPF40B-206ENST00000547764 PRAMEF22A3QJZ6 481 aa24.59■■□□□ 1.53
PRPF40B-206ENST00000547764 CANXP27824 592 aaKnown RBP24.59■■□□□ 1.53
PRPF40B-206ENST00000547764 USP16Q9Y5T5 823 aa24.59■■□□□ 1.53
PRPF40B-206ENST00000547764 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
PRPF40B-206ENST00000547764 GYS1P13807 737 aa24.57■■□□□ 1.52
PRPF40B-206ENST00000547764 SYT17Q9BSW7 474 aa24.57■■□□□ 1.52
PRPF40B-206ENST00000547764 SRP68Q9UHB9 627 aaKnown RBP24.57■■□□□ 1.52
PRPF40B-206ENST00000547764 C4AP0C0L4 1744 aa24.57■■□□□ 1.52
PRPF40B-206ENST00000547764 A1BGP04217 495 aa24.56■■□□□ 1.52
PRPF40B-206ENST00000547764 EIF4A1P60842 406 aaKnown RBP24.56■■□□□ 1.52
PRPF40B-206ENST00000547764 NLGN1Q8N2Q7 840 aa24.56■■□□□ 1.52
PRPF40B-206ENST00000547764 TSPYL4Q9UJ04 414 aa24.56■■□□□ 1.52
PRPF40B-206ENST00000547764 USP42Q9H9J4 1324 aaKnown RBP24.56■■□□□ 1.52
PRPF40B-206ENST00000547764 COL15A1P39059 1388 aa24.55■■□□□ 1.52
PRPF40B-206ENST00000547764 EIF5P55010 431 aaKnown RBP24.55■■□□□ 1.52
PRPF40B-206ENST00000547764 BABAM1Q9NWV8 329 aa24.55■■□□□ 1.52
PRPF40B-206ENST00000547764 KLHL34Q8N239 644 aa24.54■■□□□ 1.52
PRPF40B-206ENST00000547764 GIGYF1O75420 1035 aaPredicted RBP24.53■■□□□ 1.52
PRPF40B-206ENST00000547764 ZPR1O75312 459 aa24.52■■□□□ 1.52
PRPF40B-206ENST00000547764 MMP10P09238 476 aa24.52■■□□□ 1.52
PRPF40B-206ENST00000547764 IL6STP40189 918 aaPredicted RBP24.52■■□□□ 1.52
PRPF40B-206ENST00000547764 NARFQ9UHQ1 456 aa24.52■■□□□ 1.52
PRPF40B-206ENST00000547764 CHL1O00533 1208 aa24.51■■□□□ 1.51
PRPF40B-206ENST00000547764 FKBP8Q14318 412 aa24.51■■□□□ 1.51
PRPF40B-206ENST00000547764 USPL1Q5W0Q7 1092 aa24.51■■□□□ 1.51
PRPF40B-206ENST00000547764 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
PRPF40B-206ENST00000547764 A0A087WZG4 1122 aa24.5■■□□□ 1.51
PRPF40B-206ENST00000547764 PIP4K2AP48426 406 aaPredicted RBP24.5■■□□□ 1.51
PRPF40B-206ENST00000547764 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
PRPF40B-206ENST00000547764 SENP3-EIF4A1A0A087X0R7 540 aa24.48■■□□□ 1.51
PRPF40B-206ENST00000547764 NBPF26B4DH59 902 aa24.47■■□□□ 1.51
PRPF40B-206ENST00000547764 NBPF10Q6P3W6 841 aaKnown RBP24.47■■□□□ 1.51
PRPF40B-206ENST00000547764 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
PRPF40B-206ENST00000547764 NBPF15Q8N660 670 aa24.47■■□□□ 1.51
PRPF40B-206ENST00000547764 BCL2L12Q9HB09 334 aa24.47■■□□□ 1.51
PRPF40B-206ENST00000547764 TBC1D2BQ9UPU7 963 aa24.47■■□□□ 1.51
PRPF40B-206ENST00000547764 NPM2Q86SE8 214 aaKnown RBP24.46■■□□□ 1.51
PRPF40B-206ENST00000547764 NLGN2Q8NFZ4 835 aa24.46■■□□□ 1.51
PRPF40B-206ENST00000547764 CFAP44Q96MT7 982 aa24.46■■□□□ 1.51
PRPF40B-206ENST00000547764 CD2APQ9Y5K6 639 aa24.46■■□□□ 1.51
PRPF40B-206ENST00000547764 LAMB4A4D0S4 1761 aa24.45■■□□□ 1.5
PRPF40B-206ENST00000547764 PARP3Q9Y6F1 533 aa24.45■■□□□ 1.5
PRPF40B-206ENST00000547764 TM4SF1P30408 202 aa24.44■■□□□ 1.5
PRPF40B-206ENST00000547764 CALD1Q05682 793 aaKnown RBP24.44■■□□□ 1.5
PRPF40B-206ENST00000547764 ZNF853P0CG23 659 aa24.43■■□□□ 1.5
PRPF40B-206ENST00000547764 DDR1Q08345 913 aa24.43■■□□□ 1.5
PRPF40B-206ENST00000547764 CCDC27Q2M243 656 aa24.42■■□□□ 1.5
PRPF40B-206ENST00000547764 KRT24Q2M2I5 525 aa24.42■■□□□ 1.5
PRPF40B-206ENST00000547764 DZIP3Q86Y13 1208 aaKnown RBP24.42■■□□□ 1.5
PRPF40B-206ENST00000547764 MBIPQ9NS73 344 aa24.42■■□□□ 1.5
PRPF40B-206ENST00000547764 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
PRPF40B-206ENST00000547764 CAMTA2O94983 1202 aa24.41■■□□□ 1.5
PRPF40B-206ENST00000547764 NFIXQ14938 502 aa24.41■■□□□ 1.5
PRPF40B-206ENST00000547764 DCAF8L1A6NGE4 600 aa24.4■■□□□ 1.5
PRPF40B-206ENST00000547764 POLRMTO00411 1230 aaKnown RBP24.4■■□□□ 1.5
PRPF40B-206ENST00000547764 EIF2S2P20042 333 aaKnown RBP24.4■■□□□ 1.5
PRPF40B-206ENST00000547764 GNAI1P63096 354 aa24.4■■□□□ 1.5
PRPF40B-206ENST00000547764 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
PRPF40B-206ENST00000547764 WWC1Q8IX03 1113 aa24.4■■□□□ 1.5
PRPF40B-206ENST00000547764 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 SCN7AQ01118 1682 aa24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 MYL6BP14649 208 aa24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 BICDL1Q6ZP65 573 aa24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 NGEFQ8N5V2 710 aa24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 SALL2Q9Y467 1007 aaPredicted RBP24.37■■□□□ 1.49
PRPF40B-206ENST00000547764 C10orf71Q711Q0 1435 aa24.36■■□□□ 1.49
PRPF40B-206ENST00000547764 CCER2I3L3R5 266 aa24.36■■□□□ 1.49
PRPF40B-206ENST00000547764 PDIA6Q15084 440 aa24.35■■□□□ 1.49
PRPF40B-206ENST00000547764 DIEXFQ68CQ4 756 aaKnown RBP24.35■■□□□ 1.49
PRPF40B-206ENST00000547764 NECTIN2Q92692 538 aa24.35■■□□□ 1.49
PRPF40B-206ENST00000547764 SERPINB2P05120 415 aa24.34■■□□□ 1.49
PRPF40B-206ENST00000547764 CLEC4GQ6UXB4 293 aa24.34■■□□□ 1.49
PRPF40B-206ENST00000547764 BCORQ6W2J9 1755 aa24.34■■□□□ 1.49
PRPF40B-206ENST00000547764 KIF13BQ9NQT8 1826 aa24.33■■□□□ 1.49
PRPF40B-206ENST00000547764 HOXB7P09629 217 aa24.33■■□□□ 1.49
PRPF40B-206ENST00000547764 GPR162Q16538 588 aa24.33■■□□□ 1.49
PRPF40B-206ENST00000547764 DUSP27Q5VZP5 1158 aa24.33■■□□□ 1.49
PRPF40B-206ENST00000547764 ANXA1P04083 346 aa24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 TGFB2P61812 414 aa24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 PROSER3Q2NL68 480 aa24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 TTLL7Q6ZT98 887 aa24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 LRP10Q7Z4F1 713 aa24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 ZNF652Q9Y2D9 606 aa24.32■■□□□ 1.48
PRPF40B-206ENST00000547764 RGL2O15211 777 aa24.31■■□□□ 1.48
PRPF40B-206ENST00000547764 HLFQ16534 295 aa24.31■■□□□ 1.48
PRPF40B-206ENST00000547764 SETDB2Q96T68 719 aa24.31■■□□□ 1.48
PRPF40B-206ENST00000547764 IL16Q14005 1332 aa24.31■■□□□ 1.48
PRPF40B-206ENST00000547764 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
PRPF40B-206ENST00000547764 TSR2Q969E8 191 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms