RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 C19orf44Q9H6X5 657 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 HEG1Q9ULI3 1381 aa19.02■□□□□ 0.64
BRF1-212ENST00000547562 ANXA1P04083 346 aa19.02■□□□□ 0.64
BRF1-212ENST00000547562 TRIM6-TRIM34B2RNG4 842 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
BRF1-212ENST00000547562 SURF6O75683 361 aaKnown RBP19.01■□□□□ 0.63
BRF1-212ENST00000547562 ERBB3P21860 1342 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 FSD2A1L4K1 749 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 SRGAP3O43295 1099 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 CHMLP26374 656 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 IL1RAPL2Q9NP60 686 aa19.01■□□□□ 0.63
BRF1-212ENST00000547562 GOLGA6L3A6NEY3 463 aa19■□□□□ 0.63
BRF1-212ENST00000547562 PTMSP20962 102 aa19■□□□□ 0.63
BRF1-212ENST00000547562 SSFA2P28290 1259 aa19■□□□□ 0.63
BRF1-212ENST00000547562 CLEC17AQ6ZS10 378 aa19■□□□□ 0.63
BRF1-212ENST00000547562 RHPN1Q8TCX5 695 aa18.99■□□□□ 0.63
BRF1-212ENST00000547562 UNC5CLQ8IV45 518 aa18.98■□□□□ 0.63
BRF1-212ENST00000547562 KIF1BPQ96EK5 621 aa18.98■□□□□ 0.63
BRF1-212ENST00000547562 NUTM1Q86Y26 1132 aa18.98■□□□□ 0.63
BRF1-212ENST00000547562 SCN11AQ9UI33 1791 aa18.97■□□□□ 0.63
BRF1-212ENST00000547562 ZC3H6P61129 1189 aaKnown RBP18.97■□□□□ 0.63
BRF1-212ENST00000547562 PROSER3Q2NL68 480 aa18.97■□□□□ 0.63
BRF1-212ENST00000547562 SKOR2Q2VWA4 1001 aaPredicted RBP18.96■□□□□ 0.63
BRF1-212ENST00000547562 CWC22Q9HCG8 908 aaKnown RBP18.96■□□□□ 0.63
BRF1-212ENST00000547562 RTN4Q9NQC3 1192 aaKnown RBP18.96■□□□□ 0.63
BRF1-212ENST00000547562 MAP3K2Q9Y2U5 619 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 ALDH1L1O75891 902 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 MCCP23508 829 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 NUCB2P80303 420 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 HSP90AB4PQ58FF6 505 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 KSR2Q6VAB6 950 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 CRYBG1Q9Y4K1 1723 aa18.96■□□□□ 0.63
BRF1-212ENST00000547562 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
BRF1-212ENST00000547562 MTX1Q13505 466 aa18.95■□□□□ 0.62
BRF1-212ENST00000547562 PI4K2BQ8TCG2 481 aa18.95■□□□□ 0.62
BRF1-212ENST00000547562 ANO2Q9NQ90 1003 aa18.95■□□□□ 0.62
BRF1-212ENST00000547562 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
BRF1-212ENST00000547562 ATF3P18847 181 aa18.94■□□□□ 0.62
BRF1-212ENST00000547562 ANAPC15P60006 121 aa18.94■□□□□ 0.62
BRF1-212ENST00000547562 CYP2E1P05181 493 aaPredicted RBP18.94■□□□□ 0.62
BRF1-212ENST00000547562 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
BRF1-212ENST00000547562 NEK4P51957 841 aa18.94■□□□□ 0.62
BRF1-212ENST00000547562 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
BRF1-212ENST00000547562 STRCP1A6NGW2 1772 aa18.94■□□□□ 0.62
BRF1-212ENST00000547562 COL18A1P39060 1754 aa18.94■□□□□ 0.62
BRF1-212ENST00000547562 GOLGA6L22H0YM25 854 aa18.93■□□□□ 0.62
BRF1-212ENST00000547562 BAG4O95429 457 aaKnown RBP18.93■□□□□ 0.62
BRF1-212ENST00000547562 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
BRF1-212ENST00000547562 DCCP43146 1447 aa18.93■□□□□ 0.62
BRF1-212ENST00000547562 PALD1Q9ULE6 856 aa18.93■□□□□ 0.62
BRF1-212ENST00000547562 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
BRF1-212ENST00000547562 EPB41L2O43491 1005 aaKnown RBP18.92■□□□□ 0.62
BRF1-212ENST00000547562 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
BRF1-212ENST00000547562 IL17RAQ96F46 866 aa18.92■□□□□ 0.62
BRF1-212ENST00000547562 ARXQ96QS3 562 aa18.92■□□□□ 0.62
BRF1-212ENST00000547562 ANO8Q9HCE9 1232 aaPredicted RBP18.92■□□□□ 0.62
BRF1-212ENST00000547562 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
BRF1-212ENST00000547562 C5P01031 1676 aa18.92■□□□□ 0.62
BRF1-212ENST00000547562 MCM2P49736 904 aa18.92■□□□□ 0.62
BRF1-212ENST00000547562 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
BRF1-212ENST00000547562 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
BRF1-212ENST00000547562 KDM6AO15550 1401 aaPredicted RBP18.92■□□□□ 0.62
BRF1-212ENST00000547562 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
BRF1-212ENST00000547562 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
BRF1-212ENST00000547562 ABCC6O95255 1503 aa18.91■□□□□ 0.62
BRF1-212ENST00000547562 CWF19L2Q2TBE0 894 aaKnown RBP18.91■□□□□ 0.62
BRF1-212ENST00000547562 SLC52A2Q9HAB3 445 aa18.91■□□□□ 0.62
BRF1-212ENST00000547562 USP42Q9H9J4 1324 aaKnown RBP18.91■□□□□ 0.62
BRF1-212ENST00000547562 DDX58O95786 925 aaKnown RBP18.9■□□□□ 0.62
BRF1-212ENST00000547562 ZNF790Q6PG37 636 aa18.9■□□□□ 0.62
BRF1-212ENST00000547562 LINS1Q8NG48 757 aa18.9■□□□□ 0.62
BRF1-212ENST00000547562 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
BRF1-212ENST00000547562 IL25Q9H293 177 aa18.9■□□□□ 0.62
BRF1-212ENST00000547562 MAP4K4O95819 1239 aaPredicted RBP18.9■□□□□ 0.62
BRF1-212ENST00000547562 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
BRF1-212ENST00000547562 MRE11P49959 708 aa18.9■□□□□ 0.62
BRF1-212ENST00000547562 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
BRF1-212ENST00000547562 PKP1Q13835 747 aa18.9■□□□□ 0.62
BRF1-212ENST00000547562 PDIA6Q15084 440 aa18.9■□□□□ 0.62
BRF1-212ENST00000547562 MEGF6O75095 1541 aa18.89■□□□□ 0.62
BRF1-212ENST00000547562 TTC41PQ6P2S7 1318 aa18.89■□□□□ 0.61
BRF1-212ENST00000547562 PHKG2P15735 406 aa18.89■□□□□ 0.61
BRF1-212ENST00000547562 CNTROBQ8N137 903 aa18.89■□□□□ 0.61
BRF1-212ENST00000547562 TMX3Q96JJ7 454 aa18.89■□□□□ 0.61
BRF1-212ENST00000547562 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
BRF1-212ENST00000547562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.615e-8■■■■□ 20
BRF1-212ENST00000547562 UTYO14607 1347 aa18.88■□□□□ 0.61
BRF1-212ENST00000547562 SLC39A6Q13433 755 aa18.88■□□□□ 0.61
BRF1-212ENST00000547562 GRM8O00222 908 aa18.88■□□□□ 0.61
BRF1-212ENST00000547562 SGSM2O43147 1006 aa18.87■□□□□ 0.61
BRF1-212ENST00000547562 HSPA4P34932 840 aa18.87■□□□□ 0.61
BRF1-212ENST00000547562 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
BRF1-212ENST00000547562 TNS3Q68CZ2 1445 aa18.87■□□□□ 0.61
BRF1-212ENST00000547562 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
BRF1-212ENST00000547562 AIMP1Q12904 312 aaKnown RBP18.86■□□□□ 0.61
BRF1-212ENST00000547562 ERC1Q8IUD2 1116 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 NFATC2IPQ8NCF5 419 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 PLEKHG2Q9H7P9 1386 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 CUL4AQ13619 759 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms