RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 MTFR1LQ9H019 292 aa21.91■■□□□ 1.1
CCDC38-203ENST00000546803 UBR2Q8IWV8 1755 aa21.91■■□□□ 1.1
CCDC38-203ENST00000546803 IL16Q14005 1332 aa21.9■■□□□ 1.1
CCDC38-203ENST00000546803 SENP3-EIF4A1A0A087X0R7 540 aa21.9■■□□□ 1.1
CCDC38-203ENST00000546803 SPON1Q9HCB6 807 aa21.9■■□□□ 1.1
CCDC38-203ENST00000546803 USP16Q9Y5T5 823 aa21.9■■□□□ 1.1
CCDC38-203ENST00000546803 ZBTB7AO95365 584 aa21.89■■□□□ 1.09
CCDC38-203ENST00000546803 WDR63Q8IWG1 891 aa21.89■■□□□ 1.09
CCDC38-203ENST00000546803 ZBTB1Q9Y2K1 713 aa21.89■■□□□ 1.09
CCDC38-203ENST00000546803 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.09
CCDC38-203ENST00000546803 TAF1LQ8IZX4 1826 aa21.89■■□□□ 1.09
CCDC38-203ENST00000546803 TJP1Q07157 1748 aa21.89■■□□□ 1.09
CCDC38-203ENST00000546803 SOS1Q07889 1333 aaPredicted RBP21.88■■□□□ 1.09
CCDC38-203ENST00000546803 PRAMEF22A3QJZ6 481 aa21.88■■□□□ 1.09
CCDC38-203ENST00000546803 MBIPQ9NS73 344 aa21.88■■□□□ 1.09
CCDC38-203ENST00000546803 SMIM5Q71RC9 77 aa21.87■■□□□ 1.09
CCDC38-203ENST00000546803 ARHGEF1Q92888 912 aaKnown RBP21.87■■□□□ 1.09
CCDC38-203ENST00000546803 A1BGP04217 495 aa21.86■■□□□ 1.09
CCDC38-203ENST00000546803 CANXP27824 592 aaKnown RBP21.86■■□□□ 1.09
CCDC38-203ENST00000546803 RFC4P35249 363 aa21.86■■□□□ 1.09
CCDC38-203ENST00000546803 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
CCDC38-203ENST00000546803 IL6STP40189 918 aaPredicted RBP21.85■■□□□ 1.09
CCDC38-203ENST00000546803 ATF5Q9Y2D1 282 aaPredicted RBP21.85■■□□□ 1.09
CCDC38-203ENST00000546803 KDM3BQ7LBC6 1761 aa21.84■■□□□ 1.09
CCDC38-203ENST00000546803 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
CCDC38-203ENST00000546803 QSER1Q2KHR3 1735 aa21.84■■□□□ 1.09
CCDC38-203ENST00000546803 HOXB7P09629 217 aa21.84■■□□□ 1.09
CCDC38-203ENST00000546803 EIF5P55010 431 aaKnown RBP21.84■■□□□ 1.09
CCDC38-203ENST00000546803 A0A087WZG4 1122 aa21.83■■□□□ 1.09
CCDC38-203ENST00000546803 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
CCDC38-203ENST00000546803 ERBB4Q15303 1308 aa21.81■■□□□ 1.08
CCDC38-203ENST00000546803 PTGER2P43116 358 aa21.81■■□□□ 1.08
CCDC38-203ENST00000546803 COL15A1P39059 1388 aa21.81■■□□□ 1.08
CCDC38-203ENST00000546803 ZNF521Q96K83 1311 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 UBR3Q6ZT12 1888 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 POLD1P28340 1107 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 KRT24Q2M2I5 525 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 SGIP1Q9BQI5 828 aa21.8■■□□□ 1.08
CCDC38-203ENST00000546803 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
CCDC38-203ENST00000546803 NBPF26B4DH59 902 aa21.79■■□□□ 1.08
CCDC38-203ENST00000546803 ZPR1O75312 459 aa21.79■■□□□ 1.08
CCDC38-203ENST00000546803 NBPF10Q6P3W6 841 aaKnown RBP21.79■■□□□ 1.08
CCDC38-203ENST00000546803 NBPF15Q8N660 670 aa21.79■■□□□ 1.08
CCDC38-203ENST00000546803 NARFQ9UHQ1 456 aa21.79■■□□□ 1.08
CCDC38-203ENST00000546803 EIF2S2P20042 333 aaKnown RBP21.78■■□□□ 1.08
CCDC38-203ENST00000546803 MSL1Q68DK7 614 aa21.78■■□□□ 1.08
CCDC38-203ENST00000546803 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
CCDC38-203ENST00000546803 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
CCDC38-203ENST00000546803 MYH16Q9H6N6 1097 aa21.78■■□□□ 1.08
CCDC38-203ENST00000546803 ZNF330Q9Y3S2 320 aaPredicted RBP21.78■■□□□ 1.08
CCDC38-203ENST00000546803 TUBGCP6Q96RT7 1819 aa21.78■■□□□ 1.08
CCDC38-203ENST00000546803 MYH14Q7Z406 1995 aaKnown RBP21.78■■□□□ 1.08
CCDC38-203ENST00000546803 GYS1P13807 737 aa21.77■■□□□ 1.08
CCDC38-203ENST00000546803 SRP68Q9UHB9 627 aaKnown RBP21.77■■□□□ 1.08
CCDC38-203ENST00000546803 PIP4K2AP48426 406 aaPredicted RBP21.76■■□□□ 1.07
CCDC38-203ENST00000546803 GOLGA2Q08379 1002 aa21.76■■□□□ 1.07
CCDC38-203ENST00000546803 PPP1R1BQ9UD71 204 aaPredicted RBP21.76■■□□□ 1.07
CCDC38-203ENST00000546803 HDGFL1Q5TGJ6 251 aa21.75■■□□□ 1.07
CCDC38-203ENST00000546803 USPL1Q5W0Q7 1092 aa21.75■■□□□ 1.07
CCDC38-203ENST00000546803 C8orf58Q8NAV2 365 aa21.75■■□□□ 1.07
CCDC38-203ENST00000546803 LRP5O75197 1615 aa21.75■■□□□ 1.07
CCDC38-203ENST00000546803 FANCIQ9NVI1 1328 aa21.75■■□□□ 1.07
CCDC38-203ENST00000546803 DZIP3Q86Y13 1208 aaKnown RBP21.74■■□□□ 1.07
CCDC38-203ENST00000546803 ARXQ96QS3 562 aa21.74■■□□□ 1.07
CCDC38-203ENST00000546803 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
CCDC38-203ENST00000546803 ELL2O00472 640 aaPredicted RBP21.73■■□□□ 1.07
CCDC38-203ENST00000546803 RGL2O15211 777 aa21.73■■□□□ 1.07
CCDC38-203ENST00000546803 DDX21Q9NR30 783 aaKnown RBP eCLIP21.73■■□□□ 1.07
CCDC38-203ENST00000546803 TBC1D2BQ9UPU7 963 aa21.73■■□□□ 1.07
CCDC38-203ENST00000546803 E9PSI1 815 aa21.72■■□□□ 1.07
CCDC38-203ENST00000546803 MYL6BP14649 208 aa21.72■■□□□ 1.07
CCDC38-203ENST00000546803 FKBP8Q14318 412 aa21.72■■□□□ 1.07
CCDC38-203ENST00000546803 PDIA6Q15084 440 aa21.72■■□□□ 1.07
CCDC38-203ENST00000546803 NECTIN2Q92692 538 aa21.72■■□□□ 1.07
CCDC38-203ENST00000546803 DBF4Q9UBU7 674 aaPredicted RBP21.72■■□□□ 1.07
CCDC38-203ENST00000546803 CAMTA2O94983 1202 aa21.71■■□□□ 1.07
CCDC38-203ENST00000546803 MMP10P09238 476 aa21.71■■□□□ 1.07
CCDC38-203ENST00000546803 TSPYL6Q8N831 410 aa21.71■■□□□ 1.07
CCDC38-203ENST00000546803 BCL2L12Q9HB09 334 aa21.71■■□□□ 1.07
CCDC38-203ENST00000546803 TWISTNBQ3B726 338 aaPredicted RBP21.7■■□□□ 1.06
CCDC38-203ENST00000546803 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.06
CCDC38-203ENST00000546803 LRP10Q7Z4F1 713 aa21.7■■□□□ 1.06
CCDC38-203ENST00000546803 CHPF2Q9P2E5 772 aa21.7■■□□□ 1.06
CCDC38-203ENST00000546803 LAMB4A4D0S4 1761 aa21.69■■□□□ 1.06
CCDC38-203ENST00000546803 CLEC4GQ6UXB4 293 aa21.69■■□□□ 1.06
CCDC38-203ENST00000546803 ZNF652Q9Y2D9 606 aa21.69■■□□□ 1.06
CCDC38-203ENST00000546803 ERVV-1B6SEH8 477 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 TM4SF1P30408 202 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
CCDC38-203ENST00000546803 EXOSC9Q06265 439 aaKnown RBP21.68■■□□□ 1.06
CCDC38-203ENST00000546803 SLFN5Q08AF3 891 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 PROSER3Q2NL68 480 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 KIF6Q6ZMV9 814 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 HYPKQ9NX55 129 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 PARP3Q9Y6F1 533 aa21.68■■□□□ 1.06
CCDC38-203ENST00000546803 ANXA1P04083 346 aa21.67■■□□□ 1.06
CCDC38-203ENST00000546803 MAP3K15Q6ZN16 1313 aa21.66■■□□□ 1.06
CCDC38-203ENST00000546803 NFIXQ14938 502 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms