RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 INTS5Q6P9B9 1019 aaKnown RBP26.68■■□□□ 1.86
HMGA2-211ENST00000545998 AMIGO3Q86WK7 504 aa26.68■■□□□ 1.86
HMGA2-211ENST00000545998 PNPLA7Q6ZV29 1317 aa26.68■■□□□ 1.86
HMGA2-211ENST00000545998 GIGYF1O75420 1035 aaPredicted RBP26.67■■□□□ 1.86
HMGA2-211ENST00000545998 STARD3NLO95772 234 aa26.67■■□□□ 1.86
HMGA2-211ENST00000545998 GNPATO15228 680 aa26.67■■□□□ 1.86
HMGA2-211ENST00000545998 CCDC87Q9NVE4 849 aa26.67■■□□□ 1.86
HMGA2-211ENST00000545998 USP16Q9Y5T5 823 aa26.67■■□□□ 1.86
HMGA2-211ENST00000545998 PDGFDQ9GZP0 370 aaPredicted RBP26.66■■□□□ 1.86
HMGA2-211ENST00000545998 RPS6KA4O75676 772 aa26.64■■□□□ 1.86
HMGA2-211ENST00000545998 SSFA2P28290 1259 aa26.63■■□□□ 1.85
HMGA2-211ENST00000545998 SMIM5Q71RC9 77 aa26.63■■□□□ 1.85
HMGA2-211ENST00000545998 ZBTB1Q9Y2K1 713 aa26.63■■□□□ 1.85
HMGA2-211ENST00000545998 RTCBQ9Y3I0 505 aaKnown RBP26.63■■□□□ 1.85
HMGA2-211ENST00000545998 KRT24Q2M2I5 525 aa26.63■■□□□ 1.85
HMGA2-211ENST00000545998 FLAD1Q8NFF5 587 aa26.63■■□□□ 1.85
HMGA2-211ENST00000545998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.62■■□□□ 1.85
HMGA2-211ENST00000545998 PHF14O94880 888 aa26.62■■□□□ 1.85
HMGA2-211ENST00000545998 COL23A1Q86Y22 540 aaPredicted RBP26.62■■□□□ 1.85
HMGA2-211ENST00000545998 TSR2Q969E8 191 aaKnown RBP26.62■■□□□ 1.85
HMGA2-211ENST00000545998 SPINK5Q9NQ38 1064 aaPredicted RBP26.62■■□□□ 1.85
HMGA2-211ENST00000545998 A1BGP04217 495 aa26.61■■□□□ 1.85
HMGA2-211ENST00000545998 SOS1Q07889 1333 aaPredicted RBP26.59■■□□□ 1.85
HMGA2-211ENST00000545998 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
HMGA2-211ENST00000545998 ADRA2BP18089 450 aa26.58■■□□□ 1.85
HMGA2-211ENST00000545998 CANXP27824 592 aaKnown RBP26.58■■□□□ 1.85
HMGA2-211ENST00000545998 FANCIQ9NVI1 1328 aa26.58■■□□□ 1.85
HMGA2-211ENST00000545998 TRAPPC3LQ5T215 181 aa26.58■■□□□ 1.85
HMGA2-211ENST00000545998 HOXB7P09629 217 aa26.57■■□□□ 1.84
HMGA2-211ENST00000545998 GOLGA2Q08379 1002 aa26.56■■□□□ 1.84
HMGA2-211ENST00000545998 DUSP27Q5VZP5 1158 aa26.56■■□□□ 1.84
HMGA2-211ENST00000545998 ARHGEF1Q92888 912 aaKnown RBP26.56■■□□□ 1.84
HMGA2-211ENST00000545998 MSH5O43196 834 aa26.55■■□□□ 1.84
HMGA2-211ENST00000545998 EIF5P55010 431 aaKnown RBP26.55■■□□□ 1.84
HMGA2-211ENST00000545998 HNRNPUQ00839 825 aaKnown RBP eCLIP26.55■■□□□ 1.84
HMGA2-211ENST00000545998 C8orf58Q8NAV2 365 aa26.55■■□□□ 1.84
HMGA2-211ENST00000545998 MYH16Q9H6N6 1097 aa26.55■■□□□ 1.84
HMGA2-211ENST00000545998 NBPF26B4DH59 902 aa26.54■■□□□ 1.84
HMGA2-211ENST00000545998 IL6STP40189 918 aaPredicted RBP26.54■■□□□ 1.84
HMGA2-211ENST00000545998 PIP4K2AP48426 406 aaPredicted RBP26.54■■□□□ 1.84
HMGA2-211ENST00000545998 NBPF10Q6P3W6 841 aaKnown RBP26.54■■□□□ 1.84
HMGA2-211ENST00000545998 NBPF15Q8N660 670 aa26.54■■□□□ 1.84
HMGA2-211ENST00000545998 SLC16A10Q8TF71 515 aa26.54■■□□□ 1.84
HMGA2-211ENST00000545998 COL15A1P39059 1388 aa26.54■■□□□ 1.84
HMGA2-211ENST00000545998 ZBTB7AO95365 584 aa26.53■■□□□ 1.84
HMGA2-211ENST00000545998 EIF2S2P20042 333 aaKnown RBP26.53■■□□□ 1.84
HMGA2-211ENST00000545998 COL24A1Q17RW2 1714 aa26.52■■□□□ 1.84
HMGA2-211ENST00000545998 ERBB4Q15303 1308 aa26.52■■□□□ 1.84
HMGA2-211ENST00000545998 E9PSI1 815 aa26.51■■□□□ 1.83
HMGA2-211ENST00000545998 ELL2O00472 640 aaPredicted RBP26.51■■□□□ 1.83
HMGA2-211ENST00000545998 RFC4P35249 363 aa26.51■■□□□ 1.83
HMGA2-211ENST00000545998 TSPYL6Q8N831 410 aa26.51■■□□□ 1.83
HMGA2-211ENST00000545998 MTFR1LQ9H019 292 aa26.51■■□□□ 1.83
HMGA2-211ENST00000545998 SLFN5Q08AF3 891 aa26.5■■□□□ 1.83
HMGA2-211ENST00000545998 PDIA6Q15084 440 aa26.5■■□□□ 1.83
HMGA2-211ENST00000545998 HDGFL1Q5TGJ6 251 aa26.5■■□□□ 1.83
HMGA2-211ENST00000545998 NECTIN2Q92692 538 aa26.49■■□□□ 1.83
HMGA2-211ENST00000545998 CDCA7LQ96GN5 454 aa26.49■■□□□ 1.83
HMGA2-211ENST00000545998 ZNF330Q9Y3S2 320 aaPredicted RBP26.49■■□□□ 1.83
HMGA2-211ENST00000545998 USP42Q9H9J4 1324 aaKnown RBP26.49■■□□□ 1.83
HMGA2-211ENST00000545998 A0A087WZG4 1122 aa26.48■■□□□ 1.83
HMGA2-211ENST00000545998 EXOSC9Q06265 439 aaKnown RBP26.47■■□□□ 1.83
HMGA2-211ENST00000545998 SRP68Q9UHB9 627 aaKnown RBP26.47■■□□□ 1.83
HMGA2-211ENST00000545998 NARFQ9UHQ1 456 aa26.47■■□□□ 1.83
HMGA2-211ENST00000545998 ATF5Q9Y2D1 282 aaPredicted RBP26.47■■□□□ 1.83
HMGA2-211ENST00000545998 MYL6BP14649 208 aa26.46■■□□□ 1.83
HMGA2-211ENST00000545998 TWISTNBQ3B726 338 aaPredicted RBP26.46■■□□□ 1.83
HMGA2-211ENST00000545998 LRP10Q7Z4F1 713 aa26.46■■□□□ 1.83
HMGA2-211ENST00000545998 TRMT2AQ8IZ69 625 aaKnown RBP26.46■■□□□ 1.83
HMGA2-211ENST00000545998 SPON1Q9HCB6 807 aa26.46■■□□□ 1.83
HMGA2-211ENST00000545998 GYS1P13807 737 aa26.46■■□□□ 1.83
HMGA2-211ENST00000545998 PROSER3Q2NL68 480 aa26.46■■□□□ 1.83
HMGA2-211ENST00000545998 NPM2Q86SE8 214 aaKnown RBP26.46■■□□□ 1.83
HMGA2-211ENST00000545998 LRP5O75197 1615 aa26.45■■□□□ 1.83
HMGA2-211ENST00000545998 SCN7AQ01118 1682 aa26.45■■□□□ 1.82
HMGA2-211ENST00000545998 ZPR1O75312 459 aa26.45■■□□□ 1.82
HMGA2-211ENST00000545998 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
HMGA2-211ENST00000545998 DDX21Q9NR30 783 aaKnown RBP eCLIP26.45■■□□□ 1.82
HMGA2-211ENST00000545998 CHPF2Q9P2E5 772 aa26.45■■□□□ 1.82
HMGA2-211ENST00000545998 BCORQ6W2J9 1755 aa26.45■■□□□ 1.82
HMGA2-211ENST00000545998 PTGER2P43116 358 aa26.44■■□□□ 1.82
HMGA2-211ENST00000545998 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
HMGA2-211ENST00000545998 TBC1D2BQ9UPU7 963 aa26.44■■□□□ 1.82
HMGA2-211ENST00000545998 ZBED9Q6R2W3 1325 aa26.44■■□□□ 1.82
HMGA2-211ENST00000545998 ANXA1P04083 346 aa26.43■■□□□ 1.82
HMGA2-211ENST00000545998 USPL1Q5W0Q7 1092 aa26.43■■□□□ 1.82
HMGA2-211ENST00000545998 VAMP4O75379 141 aa26.42■■□□□ 1.82
HMGA2-211ENST00000545998 DZIP3Q86Y13 1208 aaKnown RBP26.42■■□□□ 1.82
HMGA2-211ENST00000545998 CHMP4AQ9BY43 222 aa26.42■■□□□ 1.82
HMGA2-211ENST00000545998 DBF4Q9UBU7 674 aaPredicted RBP26.42■■□□□ 1.82
HMGA2-211ENST00000545998 BCL2L12Q9HB09 334 aa26.41■■□□□ 1.82
HMGA2-211ENST00000545998 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
HMGA2-211ENST00000545998 CCDC30Q5VVM6 783 aa26.41■■□□□ 1.82
HMGA2-211ENST00000545998 NLGN1Q8N2Q7 840 aa26.41■■□□□ 1.82
HMGA2-211ENST00000545998 ARXQ96QS3 562 aa26.41■■□□□ 1.82
HMGA2-211ENST00000545998 FKBP8Q14318 412 aa26.4■■□□□ 1.82
HMGA2-211ENST00000545998 CACNA1FO60840 1977 aa26.39■■□□□ 1.82
HMGA2-211ENST00000545998 TTLL7Q6ZT98 887 aa26.38■■□□□ 1.81
HMGA2-211ENST00000545998 HYPKQ9NX55 129 aa26.37■■□□□ 1.81
HMGA2-211ENST00000545998 POLD1P28340 1107 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms