RNA–Protein interactions for RNA: ENST00000545855.1

ARF3-210, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-210ENST00000545855 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
ARF3-210ENST00000545855 CHD4Q14839 1912 aa12.89□□□□□ -0.35
ARF3-210ENST00000545855 IL16Q14005 1332 aa12.88□□□□□ -0.35
ARF3-210ENST00000545855 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
ARF3-210ENST00000545855 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
ARF3-210ENST00000545855 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
ARF3-210ENST00000545855 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
ARF3-210ENST00000545855 MMP10P09238 476 aa12.87□□□□□ -0.35
ARF3-210ENST00000545855 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
ARF3-210ENST00000545855 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
ARF3-210ENST00000545855 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
ARF3-210ENST00000545855 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
ARF3-210ENST00000545855 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
ARF3-210ENST00000545855 GYS1P13807 737 aa12.86□□□□□ -0.35
ARF3-210ENST00000545855 C1QTNF8P60827 252 aa12.86□□□□□ -0.35
ARF3-210ENST00000545855 TGFB2P61812 414 aa12.86□□□□□ -0.35
ARF3-210ENST00000545855 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
ARF3-210ENST00000545855 CHL1O00533 1208 aa12.85□□□□□ -0.35
ARF3-210ENST00000545855 RFC4P35249 363 aa12.85□□□□□ -0.35
ARF3-210ENST00000545855 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
ARF3-210ENST00000545855 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
ARF3-210ENST00000545855 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
ARF3-210ENST00000545855 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
ARF3-210ENST00000545855 ADCY9O60503 1353 aa12.84□□□□□ -0.35
ARF3-210ENST00000545855 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
ARF3-210ENST00000545855 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
ARF3-210ENST00000545855 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
ARF3-210ENST00000545855 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
ARF3-210ENST00000545855 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.36
ARF3-210ENST00000545855 TJP1Q07157 1748 aa12.83□□□□□ -0.36
ARF3-210ENST00000545855 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
ARF3-210ENST00000545855 GNAI1P63096 354 aa12.83□□□□□ -0.36
ARF3-210ENST00000545855 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
ARF3-210ENST00000545855 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
ARF3-210ENST00000545855 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
ARF3-210ENST00000545855 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
ARF3-210ENST00000545855 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
ARF3-210ENST00000545855 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
ARF3-210ENST00000545855 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
ARF3-210ENST00000545855 KIF13BQ9NQT8 1826 aa12.81□□□□□ -0.36
ARF3-210ENST00000545855 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
ARF3-210ENST00000545855 DNAJC10Q8IXB1 793 aa12.81□□□□□ -0.36
ARF3-210ENST00000545855 TTC5Q8N0Z6 440 aa12.81□□□□□ -0.36
ARF3-210ENST00000545855 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
ARF3-210ENST00000545855 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
ARF3-210ENST00000545855 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
ARF3-210ENST00000545855 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
ARF3-210ENST00000545855 HNRNPUQ00839 825 aaKnown RBP eCLIP12.8□□□□□ -0.36
ARF3-210ENST00000545855 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
ARF3-210ENST00000545855 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
ARF3-210ENST00000545855 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
ARF3-210ENST00000545855 SRP68Q9UHB9 627 aaKnown RBP12.8□□□□□ -0.36
ARF3-210ENST00000545855 TSPYL4Q9UJ04 414 aa12.8□□□□□ -0.36
ARF3-210ENST00000545855 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
ARF3-210ENST00000545855 TM4SF1P30408 202 aa12.79□□□□□ -0.36
ARF3-210ENST00000545855 FKBP8Q14318 412 aa12.79□□□□□ -0.36
ARF3-210ENST00000545855 TRMT2AQ8IZ69 625 aaKnown RBP12.79□□□□□ -0.36
ARF3-210ENST00000545855 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
ARF3-210ENST00000545855 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 E9PSI1 815 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 KCNQ3O43525 872 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 HOXB7P09629 217 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 DDR1Q08345 913 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 ZNF496Q96IT1 587 aaPredicted RBP12.78□□□□□ -0.36
ARF3-210ENST00000545855 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
ARF3-210ENST00000545855 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
ARF3-210ENST00000545855 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
ARF3-210ENST00000545855 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
ARF3-210ENST00000545855 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
ARF3-210ENST00000545855 DPEP1P16444 411 aa12.77□□□□□ -0.37
ARF3-210ENST00000545855 KCNA3P22001 575 aa12.77□□□□□ -0.37
ARF3-210ENST00000545855 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
ARF3-210ENST00000545855 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
ARF3-210ENST00000545855 MIS18AQ9NYP9 233 aa12.77□□□□□ -0.37
ARF3-210ENST00000545855 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
ARF3-210ENST00000545855 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
ARF3-210ENST00000545855 ZPR1O75312 459 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
ARF3-210ENST00000545855 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 ZBTB1Q9Y2K1 713 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 COL15A1P39059 1388 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 UTRNP46939 3433 aa12.76□□□□□ -0.37
ARF3-210ENST00000545855 LAS1LQ9Y4W2 734 aaKnown RBP12.75□□□□□ -0.37
ARF3-210ENST00000545855 STARD3NLO95772 234 aa12.74□□□□□ -0.37
ARF3-210ENST00000545855 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
ARF3-210ENST00000545855 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
ARF3-210ENST00000545855 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
ARF3-210ENST00000545855 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
ARF3-210ENST00000545855 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
ARF3-210ENST00000545855 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
ARF3-210ENST00000545855 EIF5P55010 431 aaKnown RBP12.73□□□□□ -0.37
ARF3-210ENST00000545855 NFIXQ14938 502 aa12.73□□□□□ -0.37
ARF3-210ENST00000545855 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
ARF3-210ENST00000545855 N4BP2Q86UW6 1770 aaPredicted RBP12.73□□□□□ -0.37
ARF3-210ENST00000545855 A0A087WZG4 1122 aa12.72□□□□□ -0.37
ARF3-210ENST00000545855 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms