RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 NEFMP07197 916 aa20.94■□□□□ 0.94
SCNN1A-220ENST00000543585 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
SCNN1A-220ENST00000543585 CCDC146Q8IYE0 955 aa20.94■□□□□ 0.94
SCNN1A-220ENST00000543585 ADAMTS8Q9UP79 889 aa20.94■□□□□ 0.94
SCNN1A-220ENST00000543585 SCN7AQ01118 1682 aa20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 BCORQ6W2J9 1755 aa20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 RFC4P35249 363 aa20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 FMNL2Q96PY5 1086 aa20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 MIS18AQ9NYP9 233 aa20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 USP42Q9H9J4 1324 aaKnown RBP20.93■□□□□ 0.94
SCNN1A-220ENST00000543585 BRCA1P38398 1863 aaKnown RBP20.92■□□□□ 0.94
SCNN1A-220ENST00000543585 MMP10P09238 476 aa20.92■□□□□ 0.94
SCNN1A-220ENST00000543585 COL15A1P39059 1388 aa20.92■□□□□ 0.94
SCNN1A-220ENST00000543585 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
SCNN1A-220ENST00000543585 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
SCNN1A-220ENST00000543585 FKBP8Q14318 412 aa20.9■□□□□ 0.94
SCNN1A-220ENST00000543585 WDR43Q15061 677 aaKnown RBP eCLIP20.9■□□□□ 0.94
SCNN1A-220ENST00000543585 RRP7AQ9Y3A4 280 aaKnown RBP20.9■□□□□ 0.94
SCNN1A-220ENST00000543585 STARD3NLO95772 234 aa20.89■□□□□ 0.93
SCNN1A-220ENST00000543585 CANXP27824 592 aaKnown RBP20.89■□□□□ 0.93
SCNN1A-220ENST00000543585 RIPK4P57078 832 aa20.89■□□□□ 0.93
SCNN1A-220ENST00000543585 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
SCNN1A-220ENST00000543585 NRXN2Q9P2S2 1712 aa20.89■□□□□ 0.93
SCNN1A-220ENST00000543585 A1BGP04217 495 aa20.88■□□□□ 0.93
SCNN1A-220ENST00000543585 EIF5P55010 431 aaKnown RBP20.88■□□□□ 0.93
SCNN1A-220ENST00000543585 USPL1Q5W0Q7 1092 aa20.88■□□□□ 0.93
SCNN1A-220ENST00000543585 NLGN1Q8N2Q7 840 aa20.88■□□□□ 0.93
SCNN1A-220ENST00000543585 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
SCNN1A-220ENST00000543585 CD2APQ9Y5K6 639 aa20.88■□□□□ 0.93
SCNN1A-220ENST00000543585 TEX13AQ9BXU3 409 aaPredicted RBP20.87■□□□□ 0.93
SCNN1A-220ENST00000543585 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
SCNN1A-220ENST00000543585 DDR1Q08345 913 aa20.86■□□□□ 0.93
SCNN1A-220ENST00000543585 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
SCNN1A-220ENST00000543585 C10orf71Q711Q0 1435 aa20.86■□□□□ 0.93
SCNN1A-220ENST00000543585 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
SCNN1A-220ENST00000543585 NARFQ9UHQ1 456 aa20.85■□□□□ 0.93
SCNN1A-220ENST00000543585 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
SCNN1A-220ENST00000543585 SNRPA1P09661 255 aaKnown RBP20.84■□□□□ 0.93
SCNN1A-220ENST00000543585 ANKRD31Q8N7Z5 1873 aa20.84■□□□□ 0.93
SCNN1A-220ENST00000543585 NUP98P52948 1817 aa20.83■□□□□ 0.93
SCNN1A-220ENST00000543585 ZPR1O75312 459 aa20.83■□□□□ 0.93
SCNN1A-220ENST00000543585 TM4SF1P30408 202 aa20.83■□□□□ 0.93
SCNN1A-220ENST00000543585 EIF4A1P60842 406 aaKnown RBP20.83■□□□□ 0.93
SCNN1A-220ENST00000543585 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.93
SCNN1A-220ENST00000543585 PXDNLA1KZ92 1463 aa20.82■□□□□ 0.92
SCNN1A-220ENST00000543585 YBX3P16989 372 aaKnown RBP eCLIP20.82■□□□□ 0.92
SCNN1A-220ENST00000543585 IL6STP40189 918 aaPredicted RBP20.82■□□□□ 0.92
SCNN1A-220ENST00000543585 NBPF26B4DH59 902 aa20.81■□□□□ 0.92
SCNN1A-220ENST00000543585 POLRMTO00411 1230 aaKnown RBP20.81■□□□□ 0.92
SCNN1A-220ENST00000543585 NBPF10Q6P3W6 841 aaKnown RBP20.81■□□□□ 0.92
SCNN1A-220ENST00000543585 NBPF15Q8N660 670 aa20.81■□□□□ 0.92
SCNN1A-220ENST00000543585 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 DCAF8L1A6NGE4 600 aa20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 NFIXQ14938 502 aa20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 TBC1D2BQ9UPU7 963 aa20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 ZNF330Q9Y3S2 320 aaPredicted RBP20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 PARP3Q9Y6F1 533 aa20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 ARFGEF1Q9Y6D6 1849 aa20.8■□□□□ 0.92
SCNN1A-220ENST00000543585 LMOD3Q0VAK6 560 aa20.79■□□□□ 0.92
SCNN1A-220ENST00000543585 GPR162Q16538 588 aa20.79■□□□□ 0.92
SCNN1A-220ENST00000543585 PELP1Q8IZL8 1130 aaKnown RBP20.79■□□□□ 0.92
SCNN1A-220ENST00000543585 A0A087WZG4 1122 aa20.78■□□□□ 0.92
SCNN1A-220ENST00000543585 ANP32CO43423 234 aa20.78■□□□□ 0.92
SCNN1A-220ENST00000543585 CAMTA2O94983 1202 aa20.78■□□□□ 0.92
SCNN1A-220ENST00000543585 TSPYL4Q9UJ04 414 aa20.78■□□□□ 0.92
SCNN1A-220ENST00000543585 WWC3Q9ULE0 1092 aa20.78■□□□□ 0.92
SCNN1A-220ENST00000543585 APAF1O14727 1248 aa20.77■□□□□ 0.92
SCNN1A-220ENST00000543585 TBC1D9BQ66K14 1250 aa20.75■□□□□ 0.91
SCNN1A-220ENST00000543585 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
SCNN1A-220ENST00000543585 COL11A2P13942 1736 aaPredicted RBP20.75■□□□□ 0.91
SCNN1A-220ENST00000543585 CACNA1SQ13698 1873 aa20.75■□□□□ 0.91
SCNN1A-220ENST00000543585 A0A0G2JLW4 131 aa20.74■□□□□ 0.91
SCNN1A-220ENST00000543585 CHL1O00533 1208 aa20.74■□□□□ 0.91
SCNN1A-220ENST00000543585 DZIP3Q86Y13 1208 aaKnown RBP20.74■□□□□ 0.91
SCNN1A-220ENST00000543585 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
SCNN1A-220ENST00000543585 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
SCNN1A-220ENST00000543585 DPEP1P16444 411 aa20.73■□□□□ 0.91
SCNN1A-220ENST00000543585 KCNA3P22001 575 aa20.73■□□□□ 0.91
SCNN1A-220ENST00000543585 YY1P25490 414 aa20.73■□□□□ 0.91
SCNN1A-220ENST00000543585 KRT24Q2M2I5 525 aa20.73■□□□□ 0.91
SCNN1A-220ENST00000543585 BICDL1Q6ZP65 573 aa20.73■□□□□ 0.91
SCNN1A-220ENST00000543585 SENP3-EIF4A1A0A087X0R7 540 aa20.72■□□□□ 0.91
SCNN1A-220ENST00000543585 SERPINB2P05120 415 aa20.72■□□□□ 0.91
SCNN1A-220ENST00000543585 TGFB2P61812 414 aa20.72■□□□□ 0.91
SCNN1A-220ENST00000543585 ANKRD36CQ5JPF3 1778 aa20.7■□□□□ 0.9
SCNN1A-220ENST00000543585 LAS1LQ9Y4W2 734 aaKnown RBP20.7■□□□□ 0.9
SCNN1A-220ENST00000543585 SBF1O95248 1867 aa20.69■□□□□ 0.9
SCNN1A-220ENST00000543585 ZNF853P0CG23 659 aa20.69■□□□□ 0.9
SCNN1A-220ENST00000543585 PDIA6Q15084 440 aa20.69■□□□□ 0.9
SCNN1A-220ENST00000543585 LRP10Q7Z4F1 713 aa20.69■□□□□ 0.9
SCNN1A-220ENST00000543585 CHRNA5P30532 468 aa20.68■□□□□ 0.9
SCNN1A-220ENST00000543585 CCDC88AQ3V6T2 1871 aa20.68■□□□□ 0.9
SCNN1A-220ENST00000543585 GRIN3BO60391 1043 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 MYL6BP14649 208 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 HLFQ16534 295 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 PROSER3Q2NL68 480 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms