RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 SWI5Q1ZZU3 235 aa7.78□□□□□ -1.16
MDM2-229ENST00000543046 ZDHHC1Q8WTX9 485 aa7.78□□□□□ -1.16
MDM2-229ENST00000543046 SCG3Q8WXD2 468 aaKnown RBP7.78□□□□□ -1.16
MDM2-229ENST00000543046 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
MDM2-229ENST00000543046 PPP1R12BO60237 982 aaPredicted RBP7.77□□□□□ -1.17
MDM2-229ENST00000543046 F11P03951 625 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 NOS2P35228 1153 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 FAM69CQ0P6D2 419 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 NFX1Q12986 1120 aaKnown RBP7.77□□□□□ -1.17
MDM2-229ENST00000543046 RIPOR1Q6ZS17 1223 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 SLC16A10Q8TF71 515 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 L3MBTL2Q969R5 705 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 AIDAQ96BJ3 306 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 GPAMQ9HCL2 828 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 CHMP3Q9Y3E7 222 aa7.77□□□□□ -1.17
MDM2-229ENST00000543046 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
MDM2-229ENST00000543046 MSX1P28360 303 aa7.76□□□□□ -1.17
MDM2-229ENST00000543046 NBPF1Q3BBV0 1214 aa7.76□□□□□ -1.17
MDM2-229ENST00000543046 SH3PXD2AQ5TCZ1 1133 aa7.76□□□□□ -1.17
MDM2-229ENST00000543046 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
MDM2-229ENST00000543046 CHMP7Q8WUX9 453 aaPredicted RBP7.76□□□□□ -1.17
MDM2-229ENST00000543046 CUEDC1Q9NWM3 386 aaPredicted RBP7.76□□□□□ -1.17
MDM2-229ENST00000543046 EML1O00423 815 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 CSB-PGBD3P0DP91 1061 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 IGFBP4P22692 258 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 WEE1P30291 646 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 C1orf216Q8TAB5 229 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 ZDHHC3Q9NYG2 299 aa7.75□□□□□ -1.17
MDM2-229ENST00000543046 CDC14CA4D256 554 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 PRMT3O60678 531 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 WFS1O76024 890 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 ATP4AP20648 1035 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 TXLNAP40222 546 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 HIRAP54198 1017 aaPredicted RBP7.74□□□□□ -1.17
MDM2-229ENST00000543046 POTEAQ6S8J7 498 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 NANOS1Q8WY41 292 aaKnown RBP7.74□□□□□ -1.17
MDM2-229ENST00000543046 PRIMPOLQ96LW4 560 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
MDM2-229ENST00000543046 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
MDM2-229ENST00000543046 H7C1W4 665 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 TATP17735 454 aaPredicted RBP7.73□□□□□ -1.17
MDM2-229ENST00000543046 DBN1Q16643 649 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 TREML4Q6UXN2 200 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 PGBD3Q8N328 593 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 VWA5B2Q8N398 1253 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 IRF7Q92985 503 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
MDM2-229ENST00000543046 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
MDM2-229ENST00000543046 GMCL1Q96IK5 515 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 ERBB4Q15303 1308 aa7.73□□□□□ -1.17
MDM2-229ENST00000543046 TMEM88BA6NKF7 163 aa7.72□□□□□ -1.17
MDM2-229ENST00000543046 FOXO3O43524 673 aa7.72□□□□□ -1.17
MDM2-229ENST00000543046 OCLNQ16625 522 aa7.72□□□□□ -1.17
MDM2-229ENST00000543046 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
MDM2-229ENST00000543046 NUCKS1Q9H1E3 243 aaKnown RBP7.72□□□□□ -1.17
MDM2-229ENST00000543046 CRISPLD1Q9H336 500 aa7.72□□□□□ -1.17
MDM2-229ENST00000543046 HCN4Q9Y3Q4 1203 aa7.72□□□□□ -1.17
MDM2-229ENST00000543046 THBS1P07996 1170 aa7.71□□□□□ -1.18
MDM2-229ENST00000543046 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
MDM2-229ENST00000543046 ARSJQ5FYB0 599 aaPredicted RBP7.71□□□□□ -1.18
MDM2-229ENST00000543046 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
MDM2-229ENST00000543046 PHACTR1Q9C0D0 580 aa7.71□□□□□ -1.18
MDM2-229ENST00000543046 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
MDM2-229ENST00000543046 CARNS1A5YM72 827 aa7.7□□□□□ -1.18
MDM2-229ENST00000543046 FKBP5Q13451 457 aaPredicted RBP7.7□□□□□ -1.18
MDM2-229ENST00000543046 EFHC2Q5JST6 749 aa7.7□□□□□ -1.18
MDM2-229ENST00000543046 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
MDM2-229ENST00000543046 C1orf53Q5VUE5 145 aa7.7□□□□□ -1.18
MDM2-229ENST00000543046 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
MDM2-229ENST00000543046 GPR161Q8N6U8 529 aaKnown RBP7.7□□□□□ -1.18
MDM2-229ENST00000543046 ZIC5Q96T25 663 aa7.7□□□□□ -1.18
MDM2-229ENST00000543046 CXXC1Q9P0U4 656 aaPredicted RBP7.7□□□□□ -1.18
MDM2-229ENST00000543046 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
MDM2-229ENST00000543046 ALDH16A1Q8IZ83 802 aa7.69□□□□□ -1.18
MDM2-229ENST00000543046 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
MDM2-229ENST00000543046 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
MDM2-229ENST00000543046 VTI1AQ96AJ9 217 aa7.69□□□□□ -1.18
MDM2-229ENST00000543046 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
MDM2-229ENST00000543046 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
MDM2-229ENST00000543046 ATP2B4P23634 1241 aa7.68□□□□□ -1.18
MDM2-229ENST00000543046 FOXR1Q6PIV2 292 aa7.68□□□□□ -1.18
MDM2-229ENST00000543046 RHPN1Q8TCX5 695 aa7.68□□□□□ -1.18
MDM2-229ENST00000543046 C7orf43Q8WVR3 580 aa7.68□□□□□ -1.18
MDM2-229ENST00000543046 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
MDM2-229ENST00000543046 GPR25O00155 361 aa7.67□□□□□ -1.18
MDM2-229ENST00000543046 GMPRP36959 345 aa7.67□□□□□ -1.18
MDM2-229ENST00000543046 UBAP2LQ14157 1087 aaKnown RBP7.67□□□□□ -1.18
MDM2-229ENST00000543046 NLRP8Q86W28 1048 aa7.67□□□□□ -1.18
MDM2-229ENST00000543046 GJA3Q9Y6H8 435 aa7.67□□□□□ -1.18
MDM2-229ENST00000543046 RTN1Q16799 776 aa7.66□□□□□ -1.18
MDM2-229ENST00000543046 KLRG1Q96E93 195 aa7.66□□□□□ -1.18
MDM2-229ENST00000543046 TRERF1Q96PN7 1200 aa7.66□□□□□ -1.18
MDM2-229ENST00000543046 MKNK1Q9BUB5 465 aa7.66□□□□□ -1.18
MDM2-229ENST00000543046 ZCCHC2Q9C0B9 1178 aaKnown RBP7.66□□□□□ -1.18
MDM2-229ENST00000543046 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
MDM2-229ENST00000543046 FIGNL1Q6PIW4 674 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms