RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 EIF4A1P60842 406 aaKnown RBP28.12■■■□□ 2.09
LINC00943-207ENST00000541359 ATF5Q9Y2D1 282 aaPredicted RBP28.12■■■□□ 2.09
LINC00943-207ENST00000541359 RTCBQ9Y3I0 505 aaKnown RBP28.12■■■□□ 2.09
LINC00943-207ENST00000541359 SENP3-EIF4A1A0A087X0R7 540 aa28.11■■■□□ 2.09
LINC00943-207ENST00000541359 ZBTB1Q9Y2K1 713 aa28.11■■■□□ 2.09
LINC00943-207ENST00000541359 CHL1O00533 1208 aa28.1■■■□□ 2.09
LINC00943-207ENST00000541359 TEX13AQ9BXU3 409 aaPredicted RBP28.1■■■□□ 2.09
LINC00943-207ENST00000541359 TSPYL4Q9UJ04 414 aa28.1■■■□□ 2.09
LINC00943-207ENST00000541359 SOS1Q07889 1333 aaPredicted RBP28.1■■■□□ 2.09
LINC00943-207ENST00000541359 SNRPA1P09661 255 aaKnown RBP28.09■■■□□ 2.09
LINC00943-207ENST00000541359 ADRA2BP18089 450 aa28.09■■■□□ 2.09
LINC00943-207ENST00000541359 CCDC27Q2M243 656 aa28.09■■■□□ 2.09
LINC00943-207ENST00000541359 NCBP3Q53F19 620 aaKnown RBP28.09■■■□□ 2.09
LINC00943-207ENST00000541359 MIER1Q8N108 512 aa28.09■■■□□ 2.09
LINC00943-207ENST00000541359 USP16Q9Y5T5 823 aa28.09■■■□□ 2.09
LINC00943-207ENST00000541359 STARD3NLO95772 234 aa28.08■■■□□ 2.09
LINC00943-207ENST00000541359 ARHGEF1Q92888 912 aaKnown RBP28.08■■■□□ 2.09
LINC00943-207ENST00000541359 MSH5O43196 834 aa28.07■■■□□ 2.08
LINC00943-207ENST00000541359 GIGYF1O75420 1035 aaPredicted RBP28.07■■■□□ 2.08
LINC00943-207ENST00000541359 ZNF853P0CG23 659 aa28.07■■■□□ 2.08
LINC00943-207ENST00000541359 TRAPPC3LQ5T215 181 aa28.07■■■□□ 2.08
LINC00943-207ENST00000541359 CFAP44Q96MT7 982 aa28.05■■■□□ 2.08
LINC00943-207ENST00000541359 A1BGP04217 495 aa28.04■■■□□ 2.08
LINC00943-207ENST00000541359 WWC1Q8IX03 1113 aa28.04■■■□□ 2.08
LINC00943-207ENST00000541359 COL15A1P39059 1388 aa28.03■■■□□ 2.08
LINC00943-207ENST00000541359 EIF5P55010 431 aaKnown RBP28.03■■■□□ 2.08
LINC00943-207ENST00000541359 MSL1Q68DK7 614 aa28.03■■■□□ 2.08
LINC00943-207ENST00000541359 CANXP27824 592 aaKnown RBP28.02■■■□□ 2.08
LINC00943-207ENST00000541359 IFT57Q9NWB7 429 aa28.02■■■□□ 2.08
LINC00943-207ENST00000541359 LAS1LQ9Y4W2 734 aaKnown RBP28.02■■■□□ 2.08
LINC00943-207ENST00000541359 MBIPQ9NS73 344 aa28.01■■■□□ 2.07
LINC00943-207ENST00000541359 USP42Q9H9J4 1324 aaKnown RBP28■■■□□ 2.07
LINC00943-207ENST00000541359 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
LINC00943-207ENST00000541359 SRP68Q9UHB9 627 aaKnown RBP28■■■□□ 2.07
LINC00943-207ENST00000541359 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
LINC00943-207ENST00000541359 GYS1P13807 737 aa27.99■■■□□ 2.07
LINC00943-207ENST00000541359 RFC4P35249 363 aa27.99■■■□□ 2.07
LINC00943-207ENST00000541359 KRT24Q2M2I5 525 aa27.99■■■□□ 2.07
LINC00943-207ENST00000541359 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
LINC00943-207ENST00000541359 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
LINC00943-207ENST00000541359 IL6STP40189 918 aaPredicted RBP27.98■■■□□ 2.07
LINC00943-207ENST00000541359 PIP4K2AP48426 406 aaPredicted RBP27.98■■■□□ 2.07
LINC00943-207ENST00000541359 SCN7AQ01118 1682 aa27.97■■■□□ 2.07
LINC00943-207ENST00000541359 GNAI1P63096 354 aa27.97■■■□□ 2.07
LINC00943-207ENST00000541359 SALL2Q9Y467 1007 aaPredicted RBP27.96■■■□□ 2.07
LINC00943-207ENST00000541359 IL16Q14005 1332 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 BCORQ6W2J9 1755 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 POLD1P28340 1107 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 NGEFQ8N5V2 710 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 ARXQ96QS3 562 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 BCL2L12Q9HB09 334 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 NARFQ9UHQ1 456 aa27.94■■■□□ 2.06
LINC00943-207ENST00000541359 ZNF521Q96K83 1311 aa27.92■■■□□ 2.06
LINC00943-207ENST00000541359 FKBP8Q14318 412 aa27.92■■■□□ 2.06
LINC00943-207ENST00000541359 USPL1Q5W0Q7 1092 aa27.92■■■□□ 2.06
LINC00943-207ENST00000541359 PPP1R1BQ9UD71 204 aaPredicted RBP27.92■■■□□ 2.06
LINC00943-207ENST00000541359 WDR63Q8IWG1 891 aa27.91■■■□□ 2.06
LINC00943-207ENST00000541359 NLGN1Q8N2Q7 840 aa27.91■■■□□ 2.06
LINC00943-207ENST00000541359 A0A087WZG4 1122 aa27.9■■■□□ 2.06
LINC00943-207ENST00000541359 ERBB4Q15303 1308 aa27.9■■■□□ 2.06
LINC00943-207ENST00000541359 ZPR1O75312 459 aa27.89■■■□□ 2.06
LINC00943-207ENST00000541359 HOXB7P09629 217 aa27.89■■■□□ 2.06
LINC00943-207ENST00000541359 PDIA6Q15084 440 aa27.89■■■□□ 2.06
LINC00943-207ENST00000541359 LRP10Q7Z4F1 713 aa27.89■■■□□ 2.06
LINC00943-207ENST00000541359 TSR2Q969E8 191 aaKnown RBP27.89■■■□□ 2.06
LINC00943-207ENST00000541359 ZNF330Q9Y3S2 320 aaPredicted RBP27.89■■■□□ 2.06
LINC00943-207ENST00000541359 MMP10P09238 476 aa27.88■■■□□ 2.05
LINC00943-207ENST00000541359 SPINK5Q9NQ38 1064 aaPredicted RBP27.88■■■□□ 2.05
LINC00943-207ENST00000541359 TBC1D2BQ9UPU7 963 aa27.88■■■□□ 2.05
LINC00943-207ENST00000541359 CAMTA2O94983 1202 aa27.87■■■□□ 2.05
LINC00943-207ENST00000541359 DUSP27Q5VZP5 1158 aa27.87■■■□□ 2.05
LINC00943-207ENST00000541359 FHDC1Q9C0D6 1143 aaPredicted RBP27.87■■■□□ 2.05
LINC00943-207ENST00000541359 EIF2S2P20042 333 aaKnown RBP27.86■■■□□ 2.05
LINC00943-207ENST00000541359 C8orf58Q8NAV2 365 aa27.86■■■□□ 2.05
LINC00943-207ENST00000541359 TM4SF1P30408 202 aa27.85■■■□□ 2.05
LINC00943-207ENST00000541359 DDR1Q08345 913 aa27.85■■■□□ 2.05
LINC00943-207ENST00000541359 PROSER3Q2NL68 480 aa27.85■■■□□ 2.05
LINC00943-207ENST00000541359 DZIP3Q86Y13 1208 aaKnown RBP27.85■■■□□ 2.05
LINC00943-207ENST00000541359 FANCIQ9NVI1 1328 aa27.84■■■□□ 2.05
LINC00943-207ENST00000541359 TSPYL6Q8N831 410 aa27.83■■■□□ 2.05
LINC00943-207ENST00000541359 NECTIN2Q92692 538 aa27.83■■■□□ 2.05
LINC00943-207ENST00000541359 SYT17Q9BSW7 474 aa27.83■■■□□ 2.05
LINC00943-207ENST00000541359 NRXN2Q9P2S2 1712 aa27.83■■■□□ 2.05
LINC00943-207ENST00000541359 KIF13BQ9NQT8 1826 aa27.83■■■□□ 2.05
LINC00943-207ENST00000541359 ANXA1P04083 346 aa27.82■■■□□ 2.04
LINC00943-207ENST00000541359 MYL6BP14649 208 aa27.82■■■□□ 2.04
LINC00943-207ENST00000541359 NFIXQ14938 502 aa27.82■■■□□ 2.04
LINC00943-207ENST00000541359 HDGFL1Q5TGJ6 251 aa27.81■■■□□ 2.04
LINC00943-207ENST00000541359 AFDNP55196 1824 aaKnown RBP27.81■■■□□ 2.04
LINC00943-207ENST00000541359 POLRMTO00411 1230 aaKnown RBP27.8■■■□□ 2.04
LINC00943-207ENST00000541359 ELL2O00472 640 aaPredicted RBP27.8■■■□□ 2.04
LINC00943-207ENST00000541359 TTLL7Q6ZT98 887 aa27.8■■■□□ 2.04
LINC00943-207ENST00000541359 KIAA1551Q9HCM1 1747 aa27.79■■■□□ 2.04
LINC00943-207ENST00000541359 C10orf71Q711Q0 1435 aa27.79■■■□□ 2.04
LINC00943-207ENST00000541359 TBC1D9BQ66K14 1250 aa27.79■■■□□ 2.04
LINC00943-207ENST00000541359 NPM2Q86SE8 214 aaKnown RBP27.79■■■□□ 2.04
LINC00943-207ENST00000541359 DDX21Q9NR30 783 aaKnown RBP eCLIP27.79■■■□□ 2.04
LINC00943-207ENST00000541359 CHPF2Q9P2E5 772 aa27.79■■■□□ 2.04
LINC00943-207ENST00000541359 RGL2O15211 777 aa27.78■■■□□ 2.04
LINC00943-207ENST00000541359 PARP3Q9Y6F1 533 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms