RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 CASZ1Q86V15 1759 aa27.74■■■□□ 2.03
FERMT3-204ENST00000540957 RPS6KA4O75676 772 aa27.74■■■□□ 2.03
FERMT3-204ENST00000540957 INTS5Q6P9B9 1019 aaKnown RBP27.74■■■□□ 2.03
FERMT3-204ENST00000540957 AMIGO3Q86WK7 504 aa27.74■■■□□ 2.03
FERMT3-204ENST00000540957 COL23A1Q86Y22 540 aaPredicted RBP27.74■■■□□ 2.03
FERMT3-204ENST00000540957 PRAMEF22A3QJZ6 481 aa27.72■■■□□ 2.03
FERMT3-204ENST00000540957 ZBTB7AO95365 584 aa27.72■■■□□ 2.03
FERMT3-204ENST00000540957 SMIM5Q71RC9 77 aa27.72■■■□□ 2.03
FERMT3-204ENST00000540957 MBIPQ9NS73 344 aa27.72■■■□□ 2.03
FERMT3-204ENST00000540957 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
FERMT3-204ENST00000540957 GIGYF1O75420 1035 aaPredicted RBP27.71■■■□□ 2.03
FERMT3-204ENST00000540957 ZNF853P0CG23 659 aa27.71■■■□□ 2.03
FERMT3-204ENST00000540957 ADRA2BP18089 450 aa27.71■■■□□ 2.03
FERMT3-204ENST00000540957 TRAPPC3LQ5T215 181 aa27.71■■■□□ 2.03
FERMT3-204ENST00000540957 ZBTB1Q9Y2K1 713 aa27.71■■■□□ 2.03
FERMT3-204ENST00000540957 USP16Q9Y5T5 823 aa27.71■■■□□ 2.03
FERMT3-204ENST00000540957 CANXP27824 592 aaKnown RBP27.7■■■□□ 2.02
FERMT3-204ENST00000540957 SLC16A10Q8TF71 515 aa27.7■■■□□ 2.02
FERMT3-204ENST00000540957 MTFR1LQ9H019 292 aa27.7■■■□□ 2.02
FERMT3-204ENST00000540957 IL16Q14005 1332 aa27.69■■■□□ 2.02
FERMT3-204ENST00000540957 WDR63Q8IWG1 891 aa27.69■■■□□ 2.02
FERMT3-204ENST00000540957 SPON1Q9HCB6 807 aa27.68■■■□□ 2.02
FERMT3-204ENST00000540957 SOS1Q07889 1333 aaPredicted RBP27.67■■■□□ 2.02
FERMT3-204ENST00000540957 A1BGP04217 495 aa27.67■■■□□ 2.02
FERMT3-204ENST00000540957 RFC4P35249 363 aa27.67■■■□□ 2.02
FERMT3-204ENST00000540957 NPM2Q86SE8 214 aaKnown RBP27.66■■■□□ 2.02
FERMT3-204ENST00000540957 ARHGEF1Q92888 912 aaKnown RBP27.66■■■□□ 2.02
FERMT3-204ENST00000540957 ATF5Q9Y2D1 282 aaPredicted RBP27.66■■■□□ 2.02
FERMT3-204ENST00000540957 MYH14Q7Z406 1995 aaKnown RBP27.66■■■□□ 2.02
FERMT3-204ENST00000540957 LAMB4A4D0S4 1761 aa27.65■■■□□ 2.02
FERMT3-204ENST00000540957 COL15A1P39059 1388 aa27.65■■■□□ 2.02
FERMT3-204ENST00000540957 ZNF330Q9Y3S2 320 aaPredicted RBP27.65■■■□□ 2.02
FERMT3-204ENST00000540957 IL6STP40189 918 aaPredicted RBP27.63■■■□□ 2.01
FERMT3-204ENST00000540957 KRT24Q2M2I5 525 aa27.63■■■□□ 2.01
FERMT3-204ENST00000540957 TSR2Q969E8 191 aaKnown RBP27.63■■■□□ 2.01
FERMT3-204ENST00000540957 A0A087WZG4 1122 aa27.61■■■□□ 2.01
FERMT3-204ENST00000540957 HOXB7P09629 217 aa27.61■■■□□ 2.01
FERMT3-204ENST00000540957 EIF2S2P20042 333 aaKnown RBP27.61■■■□□ 2.01
FERMT3-204ENST00000540957 PIP4K2AP48426 406 aaPredicted RBP27.61■■■□□ 2.01
FERMT3-204ENST00000540957 EIF5P55010 431 aaKnown RBP27.61■■■□□ 2.01
FERMT3-204ENST00000540957 MSL1Q68DK7 614 aa27.61■■■□□ 2.01
FERMT3-204ENST00000540957 ZNF521Q96K83 1311 aa27.6■■■□□ 2.01
FERMT3-204ENST00000540957 LRP5O75197 1615 aa27.59■■■□□ 2.01
FERMT3-204ENST00000540957 ZPR1O75312 459 aa27.59■■■□□ 2.01
FERMT3-204ENST00000540957 POLD1P28340 1107 aa27.59■■■□□ 2.01
FERMT3-204ENST00000540957 DUSP27Q5VZP5 1158 aa27.59■■■□□ 2.01
FERMT3-204ENST00000540957 MYH16Q9H6N6 1097 aa27.59■■■□□ 2.01
FERMT3-204ENST00000540957 USP42Q9H9J4 1324 aaKnown RBP27.59■■■□□ 2.01
FERMT3-204ENST00000540957 FANCIQ9NVI1 1328 aa27.59■■■□□ 2.01
FERMT3-204ENST00000540957 NBPF26B4DH59 902 aa27.58■■■□□ 2.01
FERMT3-204ENST00000540957 NBPF10Q6P3W6 841 aaKnown RBP27.58■■■□□ 2.01
FERMT3-204ENST00000540957 NBPF15Q8N660 670 aa27.58■■■□□ 2.01
FERMT3-204ENST00000540957 ARXQ96QS3 562 aa27.58■■■□□ 2.01
FERMT3-204ENST00000540957 ERBB4Q15303 1308 aa27.58■■■□□ 2.01
FERMT3-204ENST00000540957 C4AP0C0L4 1744 aa27.58■■■□□ 2.01
FERMT3-204ENST00000540957 HDGFL1Q5TGJ6 251 aa27.57■■■□□ 2
FERMT3-204ENST00000540957 SRP68Q9UHB9 627 aaKnown RBP27.57■■■□□ 2
FERMT3-204ENST00000540957 GOLGA2Q08379 1002 aa27.56■■■□□ 2
FERMT3-204ENST00000540957 NECTIN2Q92692 538 aa27.56■■■□□ 2
FERMT3-204ENST00000540957 PPP1R1BQ9UD71 204 aaPredicted RBP27.56■■■□□ 2
FERMT3-204ENST00000540957 NARFQ9UHQ1 456 aa27.56■■■□□ 2
FERMT3-204ENST00000540957 ELL2O00472 640 aaPredicted RBP27.55■■■□□ 2
FERMT3-204ENST00000540957 MYL6BP14649 208 aa27.55■■■□□ 2
FERMT3-204ENST00000540957 PTGER2P43116 358 aa27.55■■■□□ 2
FERMT3-204ENST00000540957 C8orf58Q8NAV2 365 aa27.55■■■□□ 2
FERMT3-204ENST00000540957 GYS1P13807 737 aa27.54■■■□□ 2
FERMT3-204ENST00000540957 USPL1Q5W0Q7 1092 aa27.54■■■□□ 2
FERMT3-204ENST00000540957 NLGN1Q8N2Q7 840 aa27.54■■■□□ 2
FERMT3-204ENST00000540957 SPINK5Q9NQ38 1064 aaPredicted RBP27.54■■■□□ 2
FERMT3-204ENST00000540957 HNRNPUQ00839 825 aaKnown RBP eCLIP27.53■■■□□ 2
FERMT3-204ENST00000540957 DZIP3Q86Y13 1208 aaKnown RBP27.53■■■□□ 2
FERMT3-204ENST00000540957 TBC1D2BQ9UPU7 963 aa27.53■■■□□ 2
FERMT3-204ENST00000540957 SGIP1Q9BQI5 828 aa27.52■■■□□ 2
FERMT3-204ENST00000540957 CHMP4AQ9BY43 222 aa27.52■■■□□ 2
FERMT3-204ENST00000540957 E9PSI1 815 aa27.51■■□□□ 1.99
FERMT3-204ENST00000540957 TWISTNBQ3B726 338 aaPredicted RBP27.5■■□□□ 1.99
FERMT3-204ENST00000540957 TSPYL6Q8N831 410 aa27.5■■□□□ 1.99
FERMT3-204ENST00000540957 FKBP8Q14318 412 aa27.49■■□□□ 1.99
FERMT3-204ENST00000540957 CHPF2Q9P2E5 772 aa27.49■■□□□ 1.99
FERMT3-204ENST00000540957 SRCAPQ6ZRS2 3230 aa27.48■■□□□ 1.99
FERMT3-204ENST00000540957 MMP10P09238 476 aa27.48■■□□□ 1.99
FERMT3-204ENST00000540957 PDIA6Q15084 440 aa27.48■■□□□ 1.99
FERMT3-204ENST00000540957 PROSER3Q2NL68 480 aa27.48■■□□□ 1.99
FERMT3-204ENST00000540957 KIF6Q6ZMV9 814 aa27.48■■□□□ 1.99
FERMT3-204ENST00000540957 DDX21Q9NR30 783 aaKnown RBP eCLIP27.48■■□□□ 1.99
FERMT3-204ENST00000540957 DBF4Q9UBU7 674 aaPredicted RBP27.48■■□□□ 1.99
FERMT3-204ENST00000540957 COL24A1Q17RW2 1714 aa27.47■■□□□ 1.99
FERMT3-204ENST00000540957 CAMTA2O94983 1202 aa27.47■■□□□ 1.99
FERMT3-204ENST00000540957 ANXA1P04083 346 aa27.47■■□□□ 1.99
FERMT3-204ENST00000540957 EXOSC9Q06265 439 aaKnown RBP27.47■■□□□ 1.99
FERMT3-204ENST00000540957 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
FERMT3-204ENST00000540957 CCDC30Q5VVM6 783 aa27.46■■□□□ 1.99
FERMT3-204ENST00000540957 ZNF652Q9Y2D9 606 aa27.46■■□□□ 1.99
FERMT3-204ENST00000540957 BCL2L12Q9HB09 334 aa27.45■■□□□ 1.98
FERMT3-204ENST00000540957 SLFN5Q08AF3 891 aa27.44■■□□□ 1.98
FERMT3-204ENST00000540957 LRP10Q7Z4F1 713 aa27.43■■□□□ 1.98
FERMT3-204ENST00000540957 CDCA7LQ96GN5 454 aa27.43■■□□□ 1.98
FERMT3-204ENST00000540957 HYPKQ9NX55 129 aa27.43■■□□□ 1.98
FERMT3-204ENST00000540957 PARP3Q9Y6F1 533 aa27.43■■□□□ 1.98
FERMT3-204ENST00000540957 TTLL7Q6ZT98 887 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms