RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 AMIGO3Q86WK7 504 aa28.66■■■□□ 2.18
RHBDL3-204ENST00000538145 GNPATO15228 680 aa28.65■■■□□ 2.18
RHBDL3-204ENST00000538145 ZBTB7AO95365 584 aa28.65■■■□□ 2.18
RHBDL3-204ENST00000538145 GIGYF1O75420 1035 aaPredicted RBP28.64■■■□□ 2.17
RHBDL3-204ENST00000538145 PTGER2P43116 358 aa28.64■■■□□ 2.17
RHBDL3-204ENST00000538145 GNAI1P63096 354 aa28.64■■■□□ 2.17
RHBDL3-204ENST00000538145 MTFR1LQ9H019 292 aa28.64■■■□□ 2.17
RHBDL3-204ENST00000538145 CCDC87Q9NVE4 849 aa28.64■■■□□ 2.17
RHBDL3-204ENST00000538145 IL16Q14005 1332 aa28.63■■■□□ 2.17
RHBDL3-204ENST00000538145 SENP3-EIF4A1A0A087X0R7 540 aa28.63■■■□□ 2.17
RHBDL3-204ENST00000538145 COL23A1Q86Y22 540 aaPredicted RBP28.63■■■□□ 2.17
RHBDL3-204ENST00000538145 SLC16A10Q8TF71 515 aa28.63■■■□□ 2.17
RHBDL3-204ENST00000538145 RTCBQ9Y3I0 505 aaKnown RBP28.63■■■□□ 2.17
RHBDL3-204ENST00000538145 ADRA2BP18089 450 aa28.62■■■□□ 2.17
RHBDL3-204ENST00000538145 WDR63Q8IWG1 891 aa28.62■■■□□ 2.17
RHBDL3-204ENST00000538145 USP16Q9Y5T5 823 aa28.62■■■□□ 2.17
RHBDL3-204ENST00000538145 COL24A1Q17RW2 1714 aa28.61■■■□□ 2.17
RHBDL3-204ENST00000538145 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.61■■■□□ 2.17
RHBDL3-204ENST00000538145 PRAMEF22A3QJZ6 481 aa28.61■■■□□ 2.17
RHBDL3-204ENST00000538145 SGIP1Q9BQI5 828 aa28.61■■■□□ 2.17
RHBDL3-204ENST00000538145 LAS1LQ9Y4W2 734 aaKnown RBP28.61■■■□□ 2.17
RHBDL3-204ENST00000538145 MBIPQ9NS73 344 aa28.6■■■□□ 2.17
RHBDL3-204ENST00000538145 ZBTB1Q9Y2K1 713 aa28.6■■■□□ 2.17
RHBDL3-204ENST00000538145 ZNF521Q96K83 1311 aa28.59■■■□□ 2.17
RHBDL3-204ENST00000538145 C4AP0C0L4 1744 aa28.58■■■□□ 2.17
RHBDL3-204ENST00000538145 SOS1Q07889 1333 aaPredicted RBP28.58■■■□□ 2.17
RHBDL3-204ENST00000538145 PPP1R1BQ9UD71 204 aaPredicted RBP28.58■■■□□ 2.17
RHBDL3-204ENST00000538145 ATF5Q9Y2D1 282 aaPredicted RBP28.58■■■□□ 2.17
RHBDL3-204ENST00000538145 SALL2Q9Y467 1007 aaPredicted RBP28.58■■■□□ 2.17
RHBDL3-204ENST00000538145 TRAPPC3LQ5T215 181 aa28.57■■■□□ 2.16
RHBDL3-204ENST00000538145 PHF14O94880 888 aa28.56■■■□□ 2.16
RHBDL3-204ENST00000538145 SMIM5Q71RC9 77 aa28.56■■■□□ 2.16
RHBDL3-204ENST00000538145 EIF5P55010 431 aaKnown RBP28.55■■■□□ 2.16
RHBDL3-204ENST00000538145 ARHGEF1Q92888 912 aaKnown RBP28.55■■■□□ 2.16
RHBDL3-204ENST00000538145 A1BGP04217 495 aa28.54■■■□□ 2.16
RHBDL3-204ENST00000538145 IL6STP40189 918 aaPredicted RBP28.54■■■□□ 2.16
RHBDL3-204ENST00000538145 HOXB7P09629 217 aa28.53■■■□□ 2.16
RHBDL3-204ENST00000538145 CANXP27824 592 aaKnown RBP28.52■■■□□ 2.16
RHBDL3-204ENST00000538145 KRT24Q2M2I5 525 aa28.51■■■□□ 2.15
RHBDL3-204ENST00000538145 ERBB4Q15303 1308 aa28.51■■■□□ 2.15
RHBDL3-204ENST00000538145 COL15A1P39059 1388 aa28.51■■■□□ 2.15
RHBDL3-204ENST00000538145 MSH5O43196 834 aa28.5■■■□□ 2.15
RHBDL3-204ENST00000538145 NBPF26B4DH59 902 aa28.49■■■□□ 2.15
RHBDL3-204ENST00000538145 RFC4P35249 363 aa28.49■■■□□ 2.15
RHBDL3-204ENST00000538145 NBPF10Q6P3W6 841 aaKnown RBP28.49■■■□□ 2.15
RHBDL3-204ENST00000538145 NBPF15Q8N660 670 aa28.49■■■□□ 2.15
RHBDL3-204ENST00000538145 TSR2Q969E8 191 aaKnown RBP28.47■■■□□ 2.15
RHBDL3-204ENST00000538145 USP42Q9H9J4 1324 aaKnown RBP28.47■■■□□ 2.15
RHBDL3-204ENST00000538145 A0A087WZG4 1122 aa28.46■■■□□ 2.15
RHBDL3-204ENST00000538145 DUSP27Q5VZP5 1158 aa28.46■■■□□ 2.15
RHBDL3-204ENST00000538145 SPINK5Q9NQ38 1064 aaPredicted RBP28.46■■■□□ 2.15
RHBDL3-204ENST00000538145 FANCIQ9NVI1 1328 aa28.46■■■□□ 2.15
RHBDL3-204ENST00000538145 NARFQ9UHQ1 456 aa28.45■■■□□ 2.15
RHBDL3-204ENST00000538145 GYS1P13807 737 aa28.44■■■□□ 2.14
RHBDL3-204ENST00000538145 C8orf58Q8NAV2 365 aa28.44■■■□□ 2.14
RHBDL3-204ENST00000538145 ARXQ96QS3 562 aa28.44■■■□□ 2.14
RHBDL3-204ENST00000538145 PIP4K2AP48426 406 aaPredicted RBP28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 MYH16Q9H6N6 1097 aa28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 SCN7AQ01118 1682 aa28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 EIF2S2P20042 333 aaKnown RBP28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 GOLGA2Q08379 1002 aa28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 PDIA6Q15084 440 aa28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 NLGN1Q8N2Q7 840 aa28.43■■■□□ 2.14
RHBDL3-204ENST00000538145 LRP10Q7Z4F1 713 aa28.42■■■□□ 2.14
RHBDL3-204ENST00000538145 FHDC1Q9C0D6 1143 aaPredicted RBP28.42■■■□□ 2.14
RHBDL3-204ENST00000538145 SRP68Q9UHB9 627 aaKnown RBP28.42■■■□□ 2.14
RHBDL3-204ENST00000538145 BCORQ6W2J9 1755 aa28.42■■■□□ 2.14
RHBDL3-204ENST00000538145 ZPR1O75312 459 aa28.41■■■□□ 2.14
RHBDL3-204ENST00000538145 HDGFL1Q5TGJ6 251 aa28.4■■■□□ 2.14
RHBDL3-204ENST00000538145 NPM2Q86SE8 214 aaKnown RBP28.4■■■□□ 2.14
RHBDL3-204ENST00000538145 SYT17Q9BSW7 474 aa28.4■■■□□ 2.14
RHBDL3-204ENST00000538145 E9PSI1 815 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 RGL2O15211 777 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 POLD1P28340 1107 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 USPL1Q5W0Q7 1092 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 MSL1Q68DK7 614 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 TSPYL6Q8N831 410 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 CHMP4AQ9BY43 222 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 BCL2L12Q9HB09 334 aa28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 DDX21Q9NR30 783 aaKnown RBP eCLIP28.39■■■□□ 2.13
RHBDL3-204ENST00000538145 DZIP3Q86Y13 1208 aaKnown RBP28.38■■■□□ 2.13
RHBDL3-204ENST00000538145 ZNF330Q9Y3S2 320 aaPredicted RBP28.38■■■□□ 2.13
RHBDL3-204ENST00000538145 ELL2O00472 640 aaPredicted RBP28.37■■■□□ 2.13
RHBDL3-204ENST00000538145 SLFN5Q08AF3 891 aa28.37■■■□□ 2.13
RHBDL3-204ENST00000538145 TBC1D2BQ9UPU7 963 aa28.37■■■□□ 2.13
RHBDL3-204ENST00000538145 CAMTA2O94983 1202 aa28.36■■■□□ 2.13
RHBDL3-204ENST00000538145 MYL6BP14649 208 aa28.36■■■□□ 2.13
RHBDL3-204ENST00000538145 FKBP8Q14318 412 aa28.36■■■□□ 2.13
RHBDL3-204ENST00000538145 TWISTNBQ3B726 338 aaPredicted RBP28.36■■■□□ 2.13
RHBDL3-204ENST00000538145 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
RHBDL3-204ENST00000538145 PROSER3Q2NL68 480 aa28.35■■■□□ 2.13
RHBDL3-204ENST00000538145 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
RHBDL3-204ENST00000538145 HNRNPUQ00839 825 aaKnown RBP eCLIP28.34■■■□□ 2.13
RHBDL3-204ENST00000538145 EXOSC9Q06265 439 aaKnown RBP28.34■■■□□ 2.13
RHBDL3-204ENST00000538145 NECTIN2Q92692 538 aa28.34■■■□□ 2.13
RHBDL3-204ENST00000538145 CHPF2Q9P2E5 772 aa28.34■■■□□ 2.13
RHBDL3-204ENST00000538145 CACNA1FO60840 1977 aa28.33■■■□□ 2.13
RHBDL3-204ENST00000538145 TM4SF1P30408 202 aa28.33■■■□□ 2.13
RHBDL3-204ENST00000538145 CCDC30Q5VVM6 783 aa28.32■■■□□ 2.12
RHBDL3-204ENST00000538145 CLEC4GQ6UXB4 293 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms