RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 TRAPPC3LQ5T215 181 aa27.46■■□□□ 1.99
LPCAT3-204ENST00000536797 INTS5Q6P9B9 1019 aaKnown RBP27.46■■□□□ 1.99
LPCAT3-204ENST00000536797 SNRPA1P09661 255 aaKnown RBP27.45■■□□□ 1.98
LPCAT3-204ENST00000536797 CALD1Q05682 793 aaKnown RBP27.43■■□□□ 1.98
LPCAT3-204ENST00000536797 ZBTB1Q9Y2K1 713 aa27.43■■□□□ 1.98
LPCAT3-204ENST00000536797 LAS1LQ9Y4W2 734 aaKnown RBP27.43■■□□□ 1.98
LPCAT3-204ENST00000536797 EIF4A1P60842 406 aaKnown RBP27.42■■□□□ 1.98
LPCAT3-204ENST00000536797 SENP3-EIF4A1A0A087X0R7 540 aa27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 ARHGEF1Q92888 912 aaKnown RBP27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 C4AP0C0L4 1744 aa27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 COL24A1Q17RW2 1714 aa27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 PRAMEF22A3QJZ6 481 aa27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 CCDC27Q2M243 656 aa27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 NCBP3Q53F19 620 aaKnown RBP27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 USP16Q9Y5T5 823 aa27.41■■□□□ 1.98
LPCAT3-204ENST00000536797 LAMB4A4D0S4 1761 aa27.4■■□□□ 1.98
LPCAT3-204ENST00000536797 CHL1O00533 1208 aa27.4■■□□□ 1.98
LPCAT3-204ENST00000536797 RFC4P35249 363 aa27.4■■□□□ 1.98
LPCAT3-204ENST00000536797 PTGER2P43116 358 aa27.4■■□□□ 1.98
LPCAT3-204ENST00000536797 PPP1R1BQ9UD71 204 aaPredicted RBP27.4■■□□□ 1.98
LPCAT3-204ENST00000536797 SOS1Q07889 1333 aaPredicted RBP27.4■■□□□ 1.98
LPCAT3-204ENST00000536797 CANXP27824 592 aaKnown RBP27.39■■□□□ 1.97
LPCAT3-204ENST00000536797 CFAP44Q96MT7 982 aa27.39■■□□□ 1.97
LPCAT3-204ENST00000536797 GIGYF1O75420 1035 aaPredicted RBP27.38■■□□□ 1.97
LPCAT3-204ENST00000536797 POLD1P28340 1107 aa27.38■■□□□ 1.97
LPCAT3-204ENST00000536797 MSL1Q68DK7 614 aa27.38■■□□□ 1.97
LPCAT3-204ENST00000536797 SGIP1Q9BQI5 828 aa27.38■■□□□ 1.97
LPCAT3-204ENST00000536797 COL15A1P39059 1388 aa27.37■■□□□ 1.97
LPCAT3-204ENST00000536797 MIER1Q8N108 512 aa27.37■■□□□ 1.97
LPCAT3-204ENST00000536797 WWC1Q8IX03 1113 aa27.36■■□□□ 1.97
LPCAT3-204ENST00000536797 IFT57Q9NWB7 429 aa27.36■■□□□ 1.97
LPCAT3-204ENST00000536797 A1BGP04217 495 aa27.35■■□□□ 1.97
LPCAT3-204ENST00000536797 GNAI1P63096 354 aa27.35■■□□□ 1.97
LPCAT3-204ENST00000536797 SALL2Q9Y467 1007 aaPredicted RBP27.34■■□□□ 1.97
LPCAT3-204ENST00000536797 ZNF853P0CG23 659 aa27.33■■□□□ 1.97
LPCAT3-204ENST00000536797 IL6STP40189 918 aaPredicted RBP27.33■■□□□ 1.97
LPCAT3-204ENST00000536797 EIF5P55010 431 aaKnown RBP27.33■■□□□ 1.97
LPCAT3-204ENST00000536797 ZNF330Q9Y3S2 320 aaPredicted RBP27.33■■□□□ 1.97
LPCAT3-204ENST00000536797 USP42Q9H9J4 1324 aaKnown RBP27.33■■□□□ 1.97
LPCAT3-204ENST00000536797 NPM2Q86SE8 214 aaKnown RBP27.33■■□□□ 1.96
LPCAT3-204ENST00000536797 NGEFQ8N5V2 710 aa27.33■■□□□ 1.96
LPCAT3-204ENST00000536797 MBIPQ9NS73 344 aa27.33■■□□□ 1.96
LPCAT3-204ENST00000536797 A0A087WZG4 1122 aa27.32■■□□□ 1.96
LPCAT3-204ENST00000536797 ZPR1O75312 459 aa27.32■■□□□ 1.96
LPCAT3-204ENST00000536797 ARXQ96QS3 562 aa27.32■■□□□ 1.96
LPCAT3-204ENST00000536797 GYS1P13807 737 aa27.31■■□□□ 1.96
LPCAT3-204ENST00000536797 SRP68Q9UHB9 627 aaKnown RBP27.31■■□□□ 1.96
LPCAT3-204ENST00000536797 NLGN1Q8N2Q7 840 aa27.3■■□□□ 1.96
LPCAT3-204ENST00000536797 PIP4K2AP48426 406 aaPredicted RBP27.29■■□□□ 1.96
LPCAT3-204ENST00000536797 NARFQ9UHQ1 456 aa27.29■■□□□ 1.96
LPCAT3-204ENST00000536797 IL16Q14005 1332 aa27.28■■□□□ 1.96
LPCAT3-204ENST00000536797 USPL1Q5W0Q7 1092 aa27.27■■□□□ 1.96
LPCAT3-204ENST00000536797 NBPF26B4DH59 902 aa27.26■■□□□ 1.95
LPCAT3-204ENST00000536797 KRT24Q2M2I5 525 aa27.26■■□□□ 1.95
LPCAT3-204ENST00000536797 NBPF10Q6P3W6 841 aaKnown RBP27.26■■□□□ 1.95
LPCAT3-204ENST00000536797 WDR63Q8IWG1 891 aa27.26■■□□□ 1.95
LPCAT3-204ENST00000536797 NBPF15Q8N660 670 aa27.26■■□□□ 1.95
LPCAT3-204ENST00000536797 EIF2S2P20042 333 aaKnown RBP27.25■■□□□ 1.95
LPCAT3-204ENST00000536797 ERBB4Q15303 1308 aa27.24■■□□□ 1.95
LPCAT3-204ENST00000536797 SCN7AQ01118 1682 aa27.24■■□□□ 1.95
LPCAT3-204ENST00000536797 MMP10P09238 476 aa27.24■■□□□ 1.95
LPCAT3-204ENST00000536797 HOXB7P09629 217 aa27.24■■□□□ 1.95
LPCAT3-204ENST00000536797 TBC1D2BQ9UPU7 963 aa27.24■■□□□ 1.95
LPCAT3-204ENST00000536797 FKBP8Q14318 412 aa27.23■■□□□ 1.95
LPCAT3-204ENST00000536797 DZIP3Q86Y13 1208 aaKnown RBP27.23■■□□□ 1.95
LPCAT3-204ENST00000536797 FHDC1Q9C0D6 1143 aaPredicted RBP27.23■■□□□ 1.95
LPCAT3-204ENST00000536797 MYL6BP14649 208 aa27.21■■□□□ 1.95
LPCAT3-204ENST00000536797 DUSP27Q5VZP5 1158 aa27.21■■□□□ 1.95
LPCAT3-204ENST00000536797 KLHL34Q8N239 644 aa27.21■■□□□ 1.95
LPCAT3-204ENST00000536797 TSR2Q969E8 191 aaKnown RBP27.21■■□□□ 1.95
LPCAT3-204ENST00000536797 BCORQ6W2J9 1755 aa27.21■■□□□ 1.95
LPCAT3-204ENST00000536797 HDGFL1Q5TGJ6 251 aa27.19■■□□□ 1.94
LPCAT3-204ENST00000536797 NECTIN2Q92692 538 aa27.19■■□□□ 1.94
LPCAT3-204ENST00000536797 BCL2L12Q9HB09 334 aa27.19■■□□□ 1.94
LPCAT3-204ENST00000536797 PARP3Q9Y6F1 533 aa27.19■■□□□ 1.94
LPCAT3-204ENST00000536797 CAMTA2O94983 1202 aa27.17■■□□□ 1.94
LPCAT3-204ENST00000536797 SYT17Q9BSW7 474 aa27.17■■□□□ 1.94
LPCAT3-204ENST00000536797 ELL2O00472 640 aaPredicted RBP27.16■■□□□ 1.94
LPCAT3-204ENST00000536797 TM4SF1P30408 202 aa27.16■■□□□ 1.94
LPCAT3-204ENST00000536797 PDIA6Q15084 440 aa27.16■■□□□ 1.94
LPCAT3-204ENST00000536797 C8orf58Q8NAV2 365 aa27.16■■□□□ 1.94
LPCAT3-204ENST00000536797 ZNF521Q96K83 1311 aa27.16■■□□□ 1.94
LPCAT3-204ENST00000536797 FANCIQ9NVI1 1328 aa27.16■■□□□ 1.94
LPCAT3-204ENST00000536797 ZNF652Q9Y2D9 606 aa27.15■■□□□ 1.94
LPCAT3-204ENST00000536797 DDR1Q08345 913 aa27.14■■□□□ 1.93
LPCAT3-204ENST00000536797 NFIXQ14938 502 aa27.14■■□□□ 1.93
LPCAT3-204ENST00000536797 KIF6Q6ZMV9 814 aa27.14■■□□□ 1.93
LPCAT3-204ENST00000536797 MYH16Q9H6N6 1097 aa27.14■■□□□ 1.93
LPCAT3-204ENST00000536797 DDX21Q9NR30 783 aaKnown RBP eCLIP27.14■■□□□ 1.93
LPCAT3-204ENST00000536797 ANXA1P04083 346 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 GOLGA2Q08379 1002 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 PROSER3Q2NL68 480 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 CLEC4GQ6UXB4 293 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 CHMP4AQ9BY43 222 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 CHPF2Q9P2E5 772 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 CD2APQ9Y5K6 639 aa27.13■■□□□ 1.93
LPCAT3-204ENST00000536797 POLRMTO00411 1230 aaKnown RBP27.12■■□□□ 1.93
LPCAT3-204ENST00000536797 RGL2O15211 777 aa27.12■■□□□ 1.93
LPCAT3-204ENST00000536797 BICDL1Q6ZP65 573 aa27.12■■□□□ 1.93
LPCAT3-204ENST00000536797 LRP10Q7Z4F1 713 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms