RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
RFX4-205ENST00000536722 UTRNP46939 3433 aa15.06■□□□□ 0
RFX4-205ENST00000536722 PRAMEF22A3QJZ6 481 aa15.06■□□□□ 0
RFX4-205ENST00000536722 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
RFX4-205ENST00000536722 ARHGEF1Q92888 912 aaKnown RBP15.06■□□□□ 0
RFX4-205ENST00000536722 RUNDC1Q96C34 613 aa15.06■□□□□ 0
RFX4-205ENST00000536722 ARXQ96QS3 562 aa15.06■□□□□ 0
RFX4-205ENST00000536722 MIS18AQ9NYP9 233 aa15.06■□□□□ 0
RFX4-205ENST00000536722 ZBTB1Q9Y2K1 713 aa15.06■□□□□ 0
RFX4-205ENST00000536722 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
RFX4-205ENST00000536722 RTCBQ9Y3I0 505 aaKnown RBP15.06■□□□□ 0
RFX4-205ENST00000536722 GOLGB1Q14789 3259 aaKnown RBP15.05■□□□□ 0
RFX4-205ENST00000536722 RIPK4P57078 832 aa15.05■□□□□ -0
RFX4-205ENST00000536722 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
RFX4-205ENST00000536722 FHDC1Q9C0D6 1143 aaPredicted RBP15.05■□□□□ -0
RFX4-205ENST00000536722 CCDC87Q9NVE4 849 aa15.05■□□□□ -0
RFX4-205ENST00000536722 PPP1R1BQ9UD71 204 aaPredicted RBP15.05■□□□□ -0
RFX4-205ENST00000536722 TRIM35Q9UPQ4 493 aa15.05■□□□□ -0
RFX4-205ENST00000536722 SOS1Q07889 1333 aaPredicted RBP15.05■□□□□ -0
RFX4-205ENST00000536722 NEFMP07197 916 aa15.04■□□□□ -0
RFX4-205ENST00000536722 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
RFX4-205ENST00000536722 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
RFX4-205ENST00000536722 ANP32CO43423 234 aa15.03■□□□□ -0
RFX4-205ENST00000536722 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
RFX4-205ENST00000536722 PNISRQ8TF01 805 aaKnown RBP15.03■□□□□ -0
RFX4-205ENST00000536722 KIF13BQ9NQT8 1826 aa15.03■□□□□ -0
RFX4-205ENST00000536722 KIAA1551Q9HCM1 1747 aa15.03■□□□□ -0
RFX4-205ENST00000536722 USP42Q9H9J4 1324 aaKnown RBP15.02■□□□□ -0
RFX4-205ENST00000536722 GYS1P13807 737 aa15.02■□□□□ -0
RFX4-205ENST00000536722 SYT17Q9BSW7 474 aa15.02■□□□□ -0
RFX4-205ENST00000536722 SRP68Q9UHB9 627 aaKnown RBP15.02■□□□□ -0
RFX4-205ENST00000536722 USP16Q9Y5T5 823 aa15.02■□□□□ -0
RFX4-205ENST00000536722 SCN7AQ01118 1682 aa15.02□□□□□ -0.01
RFX4-205ENST00000536722 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
RFX4-205ENST00000536722 COL15A1P39059 1388 aa15.01□□□□□ -0.01
RFX4-205ENST00000536722 POLD1P28340 1107 aa15.01□□□□□ -0.01
RFX4-205ENST00000536722 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
RFX4-205ENST00000536722 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
RFX4-205ENST00000536722 A1BGP04217 495 aa15□□□□□ -0.01
RFX4-205ENST00000536722 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
RFX4-205ENST00000536722 NEUROD2Q15784 382 aa15□□□□□ -0.01
RFX4-205ENST00000536722 APAF1O14727 1248 aa14.99□□□□□ -0.01
RFX4-205ENST00000536722 CANXP27824 592 aaKnown RBP14.99□□□□□ -0.01
RFX4-205ENST00000536722 RFC4P35249 363 aa14.99□□□□□ -0.01
RFX4-205ENST00000536722 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
RFX4-205ENST00000536722 NLGN2Q8NFZ4 835 aa14.99□□□□□ -0.01
RFX4-205ENST00000536722 BCL2L12Q9HB09 334 aa14.99□□□□□ -0.01
RFX4-205ENST00000536722 MRS2Q9HD23 443 aa14.99□□□□□ -0.01
RFX4-205ENST00000536722 STARD3NLO95772 234 aa14.98□□□□□ -0.01
RFX4-205ENST00000536722 MMP10P09238 476 aa14.98□□□□□ -0.01
RFX4-205ENST00000536722 SNRPA1P09661 255 aaKnown RBP14.98□□□□□ -0.01
RFX4-205ENST00000536722 PIP4K2AP48426 406 aaPredicted RBP14.98□□□□□ -0.01
RFX4-205ENST00000536722 FKBP8Q14318 412 aa14.98□□□□□ -0.01
RFX4-205ENST00000536722 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
RFX4-205ENST00000536722 NRXN2Q9P2S2 1712 aa14.97□□□□□ -0.01
RFX4-205ENST00000536722 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
RFX4-205ENST00000536722 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
RFX4-205ENST00000536722 LMOD3Q0VAK6 560 aa14.97□□□□□ -0.01
RFX4-205ENST00000536722 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
RFX4-205ENST00000536722 NBPF15Q8N660 670 aa14.97□□□□□ -0.01
RFX4-205ENST00000536722 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.01
RFX4-205ENST00000536722 BRCA1P38398 1863 aaKnown RBP14.96□□□□□ -0.01
RFX4-205ENST00000536722 DDR1Q08345 913 aa14.96□□□□□ -0.01
RFX4-205ENST00000536722 USPL1Q5W0Q7 1092 aa14.96□□□□□ -0.01
RFX4-205ENST00000536722 NLGN1Q8N2Q7 840 aa14.96□□□□□ -0.01
RFX4-205ENST00000536722 NARFQ9UHQ1 456 aa14.96□□□□□ -0.01
RFX4-205ENST00000536722 C10orf71Q711Q0 1435 aa14.95□□□□□ -0.02
RFX4-205ENST00000536722 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
RFX4-205ENST00000536722 CHL1O00533 1208 aa14.95□□□□□ -0.02
RFX4-205ENST00000536722 IL6STP40189 918 aaPredicted RBP14.95□□□□□ -0.02
RFX4-205ENST00000536722 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
RFX4-205ENST00000536722 TM4SF1P30408 202 aa14.94□□□□□ -0.02
RFX4-205ENST00000536722 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
RFX4-205ENST00000536722 KLHL34Q8N239 644 aa14.94□□□□□ -0.02
RFX4-205ENST00000536722 BABAM1Q9NWV8 329 aa14.94□□□□□ -0.02
RFX4-205ENST00000536722 ZNF853P0CG23 659 aa14.93□□□□□ -0.02
RFX4-205ENST00000536722 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
RFX4-205ENST00000536722 NUP98P52948 1817 aa14.93□□□□□ -0.02
RFX4-205ENST00000536722 ANKRD31Q8N7Z5 1873 aa14.93□□□□□ -0.02
RFX4-205ENST00000536722 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
RFX4-205ENST00000536722 ZPR1O75312 459 aa14.92□□□□□ -0.02
RFX4-205ENST00000536722 CAMTA2O94983 1202 aa14.92□□□□□ -0.02
RFX4-205ENST00000536722 NFIXQ14938 502 aa14.92□□□□□ -0.02
RFX4-205ENST00000536722 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
RFX4-205ENST00000536722 PXDNLA1KZ92 1463 aa14.92□□□□□ -0.02
RFX4-205ENST00000536722 LRP10Q7Z4F1 713 aa14.91□□□□□ -0.02
RFX4-205ENST00000536722 ZNF330Q9Y3S2 320 aaPredicted RBP14.91□□□□□ -0.02
RFX4-205ENST00000536722 CHD4Q14839 1912 aa14.91□□□□□ -0.02
RFX4-205ENST00000536722 PDIA6Q15084 440 aa14.9□□□□□ -0.02
RFX4-205ENST00000536722 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
RFX4-205ENST00000536722 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
RFX4-205ENST00000536722 A0A087WZG4 1122 aa14.89□□□□□ -0.03
RFX4-205ENST00000536722 TBC1D9BQ66K14 1250 aa14.89□□□□□ -0.03
RFX4-205ENST00000536722 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
RFX4-205ENST00000536722 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
RFX4-205ENST00000536722 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.03
RFX4-205ENST00000536722 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
RFX4-205ENST00000536722 PROSER3Q2NL68 480 aa14.88□□□□□ -0.03
RFX4-205ENST00000536722 DZIP3Q86Y13 1208 aaKnown RBP14.88□□□□□ -0.03
RFX4-205ENST00000536722 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms