RNA–Protein interactions for RNA: ENST00000535466.5

CD4-203, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-203ENST00000535466 NRXN2Q9P2S2 1712 aa8.51□□□□□ -1.05
CD4-203ENST00000535466 USP42Q9H9J4 1324 aaKnown RBP8.51□□□□□ -1.05
CD4-203ENST00000535466 PXDNLA1KZ92 1463 aa8.51□□□□□ -1.05
CD4-203ENST00000535466 ZNF316A6NFI3 1004 aaPredicted RBP8.5□□□□□ -1.05
CD4-203ENST00000535466 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
CD4-203ENST00000535466 FKBP8Q14318 412 aa8.5□□□□□ -1.05
CD4-203ENST00000535466 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
CD4-203ENST00000535466 TRIM35Q9UPQ4 493 aa8.5□□□□□ -1.05
CD4-203ENST00000535466 NUDCQ9Y266 331 aa8.5□□□□□ -1.05
CD4-203ENST00000535466 RRP7AQ9Y3A4 280 aaKnown RBP8.5□□□□□ -1.05
CD4-203ENST00000535466 COL15A1P39059 1388 aa8.49□□□□□ -1.05
CD4-203ENST00000535466 CARMIL3Q8ND23 1372 aa8.49□□□□□ -1.05
CD4-203ENST00000535466 BRCA1P38398 1863 aaKnown RBP8.49□□□□□ -1.05
CD4-203ENST00000535466 YBX3P16989 372 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD4-203ENST00000535466 TMPOP42166 694 aaKnown RBP8.49□□□□□ -1.05
CD4-203ENST00000535466 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
CD4-203ENST00000535466 CCDC87Q9NVE4 849 aa8.49□□□□□ -1.05
CD4-203ENST00000535466 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
CD4-203ENST00000535466 AFDNP55196 1824 aaKnown RBP8.49□□□□□ -1.05
CD4-203ENST00000535466 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
CD4-203ENST00000535466 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
CD4-203ENST00000535466 A1BGP04217 495 aa8.48□□□□□ -1.05
CD4-203ENST00000535466 MMP10P09238 476 aa8.48□□□□□ -1.05
CD4-203ENST00000535466 EIF5P55010 431 aaKnown RBP8.48□□□□□ -1.05
CD4-203ENST00000535466 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
CD4-203ENST00000535466 LRP10Q7Z4F1 713 aa8.48□□□□□ -1.05
CD4-203ENST00000535466 NBPF15Q8N660 670 aa8.48□□□□□ -1.05
CD4-203ENST00000535466 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
CD4-203ENST00000535466 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
CD4-203ENST00000535466 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
CD4-203ENST00000535466 ANKRD31Q8N7Z5 1873 aa8.47□□□□□ -1.05
CD4-203ENST00000535466 COL11A2P13942 1736 aaPredicted RBP8.47□□□□□ -1.05
CD4-203ENST00000535466 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
CD4-203ENST00000535466 HTATSF1O43719 755 aaKnown RBP8.47□□□□□ -1.05
CD4-203ENST00000535466 TEFQ10587 303 aa8.47□□□□□ -1.05
CD4-203ENST00000535466 KRT24Q2M2I5 525 aa8.47□□□□□ -1.05
CD4-203ENST00000535466 FLAD1Q8NFF5 587 aa8.47□□□□□ -1.05
CD4-203ENST00000535466 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
CD4-203ENST00000535466 POLRMTO00411 1230 aaKnown RBP8.46□□□□□ -1.06
CD4-203ENST00000535466 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.06
CD4-203ENST00000535466 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
CD4-203ENST00000535466 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.06
CD4-203ENST00000535466 CAMTA2O94983 1202 aa8.45□□□□□ -1.06
CD4-203ENST00000535466 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
CD4-203ENST00000535466 POLD1P28340 1107 aa8.45□□□□□ -1.06
CD4-203ENST00000535466 TM4SF1P30408 202 aa8.45□□□□□ -1.06
CD4-203ENST00000535466 NFIXQ14938 502 aa8.45□□□□□ -1.06
CD4-203ENST00000535466 FMNL2Q96PY5 1086 aa8.45□□□□□ -1.06
CD4-203ENST00000535466 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
CD4-203ENST00000535466 TNRC6CQ9HCJ0 1690 aaKnown RBP8.44□□□□□ -1.06
CD4-203ENST00000535466 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
CD4-203ENST00000535466 KCNA3P22001 575 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 RIPK4P57078 832 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 PDIA6Q15084 440 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 TAF7Q15545 349 aaPredicted RBP8.44□□□□□ -1.06
CD4-203ENST00000535466 PROSER3Q2NL68 480 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 TTC5Q8N0Z6 440 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
CD4-203ENST00000535466 NARFQ9UHQ1 456 aa8.44□□□□□ -1.06
CD4-203ENST00000535466 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 APAF1O14727 1248 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 ZNF853P0CG23 659 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 RFC4P35249 363 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 SLC51AQ86UW1 340 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
CD4-203ENST00000535466 RUNDC1Q96C34 613 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 TBC1D2BQ9UPU7 963 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 CD2APQ9Y5K6 639 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 MAPK8IP3Q9UPT6 1336 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 ADCY9O60503 1353 aa8.43□□□□□ -1.06
CD4-203ENST00000535466 CHL1O00533 1208 aa8.42□□□□□ -1.06
CD4-203ENST00000535466 ANXA1P04083 346 aa8.42□□□□□ -1.06
CD4-203ENST00000535466 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
CD4-203ENST00000535466 IL6STP40189 918 aaPredicted RBP8.42□□□□□ -1.06
CD4-203ENST00000535466 HLFQ16534 295 aa8.42□□□□□ -1.06
CD4-203ENST00000535466 CHD4Q14839 1912 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 ABCC12Q96J65 1359 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 DPEP1P16444 411 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 TTLL7Q6ZT98 887 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 NLGN1Q8N2Q7 840 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 TSPYL4Q9UJ04 414 aa8.41□□□□□ -1.06
CD4-203ENST00000535466 COL4A1P02462 1669 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 UBN2Q6ZU65 1347 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 A0A0G2JLW4 131 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 STARD3NLO95772 234 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 CHRNA5P30532 468 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 PRELPP51888 382 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.06
CD4-203ENST00000535466 MBIPQ9NS73 344 aa8.4□□□□□ -1.06
CD4-203ENST00000535466 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.07
CD4-203ENST00000535466 NUP98P52948 1817 aa8.39□□□□□ -1.07
CD4-203ENST00000535466 PRR5LQ6MZQ0 368 aa8.39□□□□□ -1.07
CD4-203ENST00000535466 DZIP3Q86Y13 1208 aaKnown RBP8.39□□□□□ -1.07
CD4-203ENST00000535466 SPINK5Q9NQ38 1064 aaPredicted RBP8.39□□□□□ -1.07
CD4-203ENST00000535466 ZNF330Q9Y3S2 320 aaPredicted RBP8.39□□□□□ -1.07
CD4-203ENST00000535466 SNED1Q8TER0 1413 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms