RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 GIGYF1O75420 1035 aaPredicted RBP26.78■■□□□ 1.88
CHFR-209ENST00000535181 RPS6KA4O75676 772 aa26.78■■□□□ 1.88
CHFR-209ENST00000535181 ADRA2BP18089 450 aa26.78■■□□□ 1.88
CHFR-209ENST00000535181 RTCBQ9Y3I0 505 aaKnown RBP26.78■■□□□ 1.88
CHFR-209ENST00000535181 AMIGO3Q86WK7 504 aa26.77■■□□□ 1.88
CHFR-209ENST00000535181 LAS1LQ9Y4W2 734 aaKnown RBP26.77■■□□□ 1.88
CHFR-209ENST00000535181 SENP3-EIF4A1A0A087X0R7 540 aa26.76■■□□□ 1.87
CHFR-209ENST00000535181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.76■■□□□ 1.87
CHFR-209ENST00000535181 SLC16A10Q8TF71 515 aa26.76■■□□□ 1.87
CHFR-209ENST00000535181 MBIPQ9NS73 344 aa26.76■■□□□ 1.87
CHFR-209ENST00000535181 ZNF521Q96K83 1311 aa26.75■■□□□ 1.87
CHFR-209ENST00000535181 COL23A1Q86Y22 540 aaPredicted RBP26.75■■□□□ 1.87
CHFR-209ENST00000535181 PDGFDQ9GZP0 370 aaPredicted RBP26.75■■□□□ 1.87
CHFR-209ENST00000535181 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
CHFR-209ENST00000535181 SALL2Q9Y467 1007 aaPredicted RBP26.74■■□□□ 1.87
CHFR-209ENST00000535181 USP16Q9Y5T5 823 aa26.74■■□□□ 1.87
CHFR-209ENST00000535181 SOS1Q07889 1333 aaPredicted RBP26.73■■□□□ 1.87
CHFR-209ENST00000535181 ZBTB1Q9Y2K1 713 aa26.73■■□□□ 1.87
CHFR-209ENST00000535181 C4AP0C0L4 1744 aa26.72■■□□□ 1.87
CHFR-209ENST00000535181 COL24A1Q17RW2 1714 aa26.72■■□□□ 1.87
CHFR-209ENST00000535181 LRP5O75197 1615 aa26.72■■□□□ 1.87
CHFR-209ENST00000535181 PHF14O94880 888 aa26.71■■□□□ 1.87
CHFR-209ENST00000535181 HOXB7P09629 217 aa26.71■■□□□ 1.87
CHFR-209ENST00000535181 TRAPPC3LQ5T215 181 aa26.71■■□□□ 1.87
CHFR-209ENST00000535181 MTFR1LQ9H019 292 aa26.71■■□□□ 1.87
CHFR-209ENST00000535181 IL6STP40189 918 aaPredicted RBP26.69■■□□□ 1.86
CHFR-209ENST00000535181 COL15A1P39059 1388 aa26.69■■□□□ 1.86
CHFR-209ENST00000535181 ERBB4Q15303 1308 aa26.68■■□□□ 1.86
CHFR-209ENST00000535181 A1BGP04217 495 aa26.68■■□□□ 1.86
CHFR-209ENST00000535181 EIF5P55010 431 aaKnown RBP26.68■■□□□ 1.86
CHFR-209ENST00000535181 ARHGEF1Q92888 912 aaKnown RBP26.68■■□□□ 1.86
CHFR-209ENST00000535181 SMIM5Q71RC9 77 aa26.67■■□□□ 1.86
CHFR-209ENST00000535181 MSH5O43196 834 aa26.66■■□□□ 1.86
CHFR-209ENST00000535181 ZBTB7AO95365 584 aa26.66■■□□□ 1.86
CHFR-209ENST00000535181 CANXP27824 592 aaKnown RBP26.66■■□□□ 1.86
CHFR-209ENST00000535181 SPON1Q9HCB6 807 aa26.66■■□□□ 1.86
CHFR-209ENST00000535181 RFC4P35249 363 aa26.65■■□□□ 1.86
CHFR-209ENST00000535181 KRT24Q2M2I5 525 aa26.65■■□□□ 1.86
CHFR-209ENST00000535181 FANCIQ9NVI1 1328 aa26.65■■□□□ 1.86
CHFR-209ENST00000535181 A0A087WZG4 1122 aa26.64■■□□□ 1.86
CHFR-209ENST00000535181 NBPF26B4DH59 902 aa26.64■■□□□ 1.86
CHFR-209ENST00000535181 NBPF10Q6P3W6 841 aaKnown RBP26.64■■□□□ 1.86
CHFR-209ENST00000535181 NBPF15Q8N660 670 aa26.64■■□□□ 1.86
CHFR-209ENST00000535181 TSR2Q969E8 191 aaKnown RBP26.64■■□□□ 1.86
CHFR-209ENST00000535181 USP42Q9H9J4 1324 aaKnown RBP26.64■■□□□ 1.85
CHFR-209ENST00000535181 DUSP27Q5VZP5 1158 aa26.63■■□□□ 1.85
CHFR-209ENST00000535181 MYH16Q9H6N6 1097 aa26.63■■□□□ 1.85
CHFR-209ENST00000535181 SGIP1Q9BQI5 828 aa26.62■■□□□ 1.85
CHFR-209ENST00000535181 SPINK5Q9NQ38 1064 aaPredicted RBP26.62■■□□□ 1.85
CHFR-209ENST00000535181 GOLGA2Q08379 1002 aa26.61■■□□□ 1.85
CHFR-209ENST00000535181 NARFQ9UHQ1 456 aa26.61■■□□□ 1.85
CHFR-209ENST00000535181 SCN7AQ01118 1682 aa26.6■■□□□ 1.85
CHFR-209ENST00000535181 PTGER2P43116 358 aa26.6■■□□□ 1.85
CHFR-209ENST00000535181 NPM2Q86SE8 214 aaKnown RBP26.6■■□□□ 1.85
CHFR-209ENST00000535181 C8orf58Q8NAV2 365 aa26.6■■□□□ 1.85
CHFR-209ENST00000535181 CHMP4AQ9BY43 222 aa26.6■■□□□ 1.85
CHFR-209ENST00000535181 E9PSI1 815 aa26.59■■□□□ 1.85
CHFR-209ENST00000535181 GYS1P13807 737 aa26.59■■□□□ 1.85
CHFR-209ENST00000535181 EIF2S2P20042 333 aaKnown RBP26.59■■□□□ 1.85
CHFR-209ENST00000535181 ATF5Q9Y2D1 282 aaPredicted RBP26.59■■□□□ 1.85
CHFR-209ENST00000535181 ZPR1O75312 459 aa26.58■■□□□ 1.85
CHFR-209ENST00000535181 PIP4K2AP48426 406 aaPredicted RBP26.58■■□□□ 1.85
CHFR-209ENST00000535181 PDIA6Q15084 440 aa26.58■■□□□ 1.85
CHFR-209ENST00000535181 HDGFL1Q5TGJ6 251 aa26.58■■□□□ 1.85
CHFR-209ENST00000535181 BCORQ6W2J9 1755 aa26.58■■□□□ 1.85
CHFR-209ENST00000535181 SRCAPQ6ZRS2 3230 aa26.58■■□□□ 1.84
CHFR-209ENST00000535181 RGL2O15211 777 aa26.57■■□□□ 1.84
CHFR-209ENST00000535181 NLGN1Q8N2Q7 840 aa26.57■■□□□ 1.84
CHFR-209ENST00000535181 LRP10Q7Z4F1 713 aa26.56■■□□□ 1.84
CHFR-209ENST00000535181 SRP68Q9UHB9 627 aaKnown RBP26.56■■□□□ 1.84
CHFR-209ENST00000535181 POLD1P28340 1107 aa26.55■■□□□ 1.84
CHFR-209ENST00000535181 HNRNPUQ00839 825 aaKnown RBP eCLIP26.55■■□□□ 1.84
CHFR-209ENST00000535181 SLFN5Q08AF3 891 aa26.55■■□□□ 1.84
CHFR-209ENST00000535181 USPL1Q5W0Q7 1092 aa26.55■■□□□ 1.84
CHFR-209ENST00000535181 DDX21Q9NR30 783 aaKnown RBP eCLIP26.55■■□□□ 1.84
CHFR-209ENST00000535181 ZNF330Q9Y3S2 320 aaPredicted RBP26.55■■□□□ 1.84
CHFR-209ENST00000535181 TWISTNBQ3B726 338 aaPredicted RBP26.54■■□□□ 1.84
CHFR-209ENST00000535181 MSL1Q68DK7 614 aa26.54■■□□□ 1.84
CHFR-209ENST00000535181 DZIP3Q86Y13 1208 aaKnown RBP26.54■■□□□ 1.84
CHFR-209ENST00000535181 TSPYL6Q8N831 410 aa26.54■■□□□ 1.84
CHFR-209ENST00000535181 DBF4Q9UBU7 674 aaPredicted RBP26.54■■□□□ 1.84
CHFR-209ENST00000535181 ELL2O00472 640 aaPredicted RBP26.53■■□□□ 1.84
CHFR-209ENST00000535181 CAMTA2O94983 1202 aa26.52■■□□□ 1.84
CHFR-209ENST00000535181 MYL6BP14649 208 aa26.52■■□□□ 1.84
CHFR-209ENST00000535181 EXOSC9Q06265 439 aaKnown RBP26.52■■□□□ 1.84
CHFR-209ENST00000535181 TRMT2AQ8IZ69 625 aaKnown RBP26.52■■□□□ 1.84
CHFR-209ENST00000535181 BCL2L12Q9HB09 334 aa26.52■■□□□ 1.84
CHFR-209ENST00000535181 TBC1D2BQ9UPU7 963 aa26.52■■□□□ 1.84
CHFR-209ENST00000535181 FKBP8Q14318 412 aa26.51■■□□□ 1.83
CHFR-209ENST00000535181 PROSER3Q2NL68 480 aa26.51■■□□□ 1.83
CHFR-209ENST00000535181 CCDC30Q5VVM6 783 aa26.51■■□□□ 1.83
CHFR-209ENST00000535181 NECTIN2Q92692 538 aa26.51■■□□□ 1.83
CHFR-209ENST00000535181 CHPF2Q9P2E5 772 aa26.51■■□□□ 1.83
CHFR-209ENST00000535181 CLEC4GQ6UXB4 293 aa26.5■■□□□ 1.83
CHFR-209ENST00000535181 ZBED9Q6R2W3 1325 aa26.49■■□□□ 1.83
CHFR-209ENST00000535181 ARXQ96QS3 562 aa26.49■■□□□ 1.83
CHFR-209ENST00000535181 HYPKQ9NX55 129 aa26.49■■□□□ 1.83
CHFR-209ENST00000535181 ERVV-1B6SEH8 477 aa26.48■■□□□ 1.83
CHFR-209ENST00000535181 VAMP4O75379 141 aa26.48■■□□□ 1.83
CHFR-209ENST00000535181 MMP10P09238 476 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms