RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 MBIPQ9NS73 344 aa31.49■■■□□ 2.63
SIPA1-210ENST00000534406 AMIGO3Q86WK7 504 aa31.48■■■□□ 2.63
SIPA1-210ENST00000534406 WDR63Q8IWG1 891 aa31.48■■■□□ 2.63
SIPA1-210ENST00000534406 FLAD1Q8NFF5 587 aa31.48■■■□□ 2.63
SIPA1-210ENST00000534406 RTCBQ9Y3I0 505 aaKnown RBP31.48■■■□□ 2.63
SIPA1-210ENST00000534406 PRAMEF22A3QJZ6 481 aa31.47■■■□□ 2.63
SIPA1-210ENST00000534406 GIGYF1O75420 1035 aaPredicted RBP31.47■■■□□ 2.63
SIPA1-210ENST00000534406 PHF14O94880 888 aa31.47■■■□□ 2.63
SIPA1-210ENST00000534406 INTS5Q6P9B9 1019 aaKnown RBP31.47■■■□□ 2.63
SIPA1-210ENST00000534406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.46■■■□□ 2.63
SIPA1-210ENST00000534406 RPS6KA4O75676 772 aa31.46■■■□□ 2.63
SIPA1-210ENST00000534406 PDGFDQ9GZP0 370 aaPredicted RBP31.46■■■□□ 2.63
SIPA1-210ENST00000534406 C4AP0C0L4 1744 aa31.45■■■□□ 2.63
SIPA1-210ENST00000534406 ZBTB1Q9Y2K1 713 aa31.45■■■□□ 2.63
SIPA1-210ENST00000534406 USP16Q9Y5T5 823 aa31.44■■■□□ 2.62
SIPA1-210ENST00000534406 ADRA2BP18089 450 aa31.43■■■□□ 2.62
SIPA1-210ENST00000534406 COL23A1Q86Y22 540 aaPredicted RBP31.43■■■□□ 2.62
SIPA1-210ENST00000534406 SOS1Q07889 1333 aaPredicted RBP31.43■■■□□ 2.62
SIPA1-210ENST00000534406 ZNF521Q96K83 1311 aa31.43■■■□□ 2.62
SIPA1-210ENST00000534406 MSH5O43196 834 aa31.42■■■□□ 2.62
SIPA1-210ENST00000534406 SMIM5Q71RC9 77 aa31.42■■■□□ 2.62
SIPA1-210ENST00000534406 CANXP27824 592 aaKnown RBP31.4■■■□□ 2.62
SIPA1-210ENST00000534406 COL15A1P39059 1388 aa31.4■■■□□ 2.62
SIPA1-210ENST00000534406 A1BGP04217 495 aa31.39■■■□□ 2.62
SIPA1-210ENST00000534406 KRT24Q2M2I5 525 aa31.39■■■□□ 2.62
SIPA1-210ENST00000534406 TRAPPC3LQ5T215 181 aa31.39■■■□□ 2.62
SIPA1-210ENST00000534406 TSR2Q969E8 191 aaKnown RBP31.39■■■□□ 2.62
SIPA1-210ENST00000534406 SLC16A10Q8TF71 515 aa31.38■■■□□ 2.61
SIPA1-210ENST00000534406 ZBTB7AO95365 584 aa31.37■■■□□ 2.61
SIPA1-210ENST00000534406 HOXB7P09629 217 aa31.37■■■□□ 2.61
SIPA1-210ENST00000534406 FANCIQ9NVI1 1328 aa31.37■■■□□ 2.61
SIPA1-210ENST00000534406 LRP5O75197 1615 aa31.37■■■□□ 2.61
SIPA1-210ENST00000534406 MTFR1LQ9H019 292 aa31.36■■■□□ 2.61
SIPA1-210ENST00000534406 IL6STP40189 918 aaPredicted RBP31.35■■■□□ 2.61
SIPA1-210ENST00000534406 ARHGEF1Q92888 912 aaKnown RBP31.35■■■□□ 2.61
SIPA1-210ENST00000534406 ERBB4Q15303 1308 aa31.34■■■□□ 2.61
SIPA1-210ENST00000534406 RFC4P35249 363 aa31.34■■■□□ 2.61
SIPA1-210ENST00000534406 EIF5P55010 431 aaKnown RBP31.34■■■□□ 2.61
SIPA1-210ENST00000534406 DUSP27Q5VZP5 1158 aa31.34■■■□□ 2.61
SIPA1-210ENST00000534406 MYH16Q9H6N6 1097 aa31.34■■■□□ 2.61
SIPA1-210ENST00000534406 COL24A1Q17RW2 1714 aa31.33■■■□□ 2.61
SIPA1-210ENST00000534406 ZNF330Q9Y3S2 320 aaPredicted RBP31.33■■■□□ 2.61
SIPA1-210ENST00000534406 EIF2S2P20042 333 aaKnown RBP31.32■■■□□ 2.6
SIPA1-210ENST00000534406 PIP4K2AP48426 406 aaPredicted RBP31.32■■■□□ 2.6
SIPA1-210ENST00000534406 HNRNPUQ00839 825 aaKnown RBP eCLIP31.32■■■□□ 2.6
SIPA1-210ENST00000534406 GOLGA2Q08379 1002 aa31.32■■■□□ 2.6
SIPA1-210ENST00000534406 NPM2Q86SE8 214 aaKnown RBP31.32■■■□□ 2.6
SIPA1-210ENST00000534406 SPON1Q9HCB6 807 aa31.32■■■□□ 2.6
SIPA1-210ENST00000534406 SPINK5Q9NQ38 1064 aaPredicted RBP31.32■■■□□ 2.6
SIPA1-210ENST00000534406 SCN7AQ01118 1682 aa31.31■■■□□ 2.6
SIPA1-210ENST00000534406 USP42Q9H9J4 1324 aaKnown RBP31.3■■■□□ 2.6
SIPA1-210ENST00000534406 A0A087WZG4 1122 aa31.3■■■□□ 2.6
SIPA1-210ENST00000534406 NBPF26B4DH59 902 aa31.3■■■□□ 2.6
SIPA1-210ENST00000534406 NBPF10Q6P3W6 841 aaKnown RBP31.3■■■□□ 2.6
SIPA1-210ENST00000534406 NBPF15Q8N660 670 aa31.3■■■□□ 2.6
SIPA1-210ENST00000534406 C8orf58Q8NAV2 365 aa31.3■■■□□ 2.6
SIPA1-210ENST00000534406 ATF5Q9Y2D1 282 aaPredicted RBP31.3■■■□□ 2.6
SIPA1-210ENST00000534406 SRCAPQ6ZRS2 3230 aa31.3■■■□□ 2.6
SIPA1-210ENST00000534406 HDGFL1Q5TGJ6 251 aa31.29■■■□□ 2.6
SIPA1-210ENST00000534406 E9PSI1 815 aa31.27■■■□□ 2.6
SIPA1-210ENST00000534406 ELL2O00472 640 aaPredicted RBP31.27■■■□□ 2.6
SIPA1-210ENST00000534406 MSL1Q68DK7 614 aa31.27■■■□□ 2.6
SIPA1-210ENST00000534406 NECTIN2Q92692 538 aa31.27■■■□□ 2.6
SIPA1-210ENST00000534406 SRP68Q9UHB9 627 aaKnown RBP31.27■■■□□ 2.6
SIPA1-210ENST00000534406 BCORQ6W2J9 1755 aa31.27■■■□□ 2.6
SIPA1-210ENST00000534406 ZPR1O75312 459 aa31.26■■■□□ 2.59
SIPA1-210ENST00000534406 NARFQ9UHQ1 456 aa31.26■■■□□ 2.59
SIPA1-210ENST00000534406 TSPYL6Q8N831 410 aa31.25■■■□□ 2.59
SIPA1-210ENST00000534406 GYS1P13807 737 aa31.24■■■□□ 2.59
SIPA1-210ENST00000534406 MYL6BP14649 208 aa31.23■■■□□ 2.59
SIPA1-210ENST00000534406 POLD1P28340 1107 aa31.23■■■□□ 2.59
SIPA1-210ENST00000534406 TWISTNBQ3B726 338 aaPredicted RBP31.23■■■□□ 2.59
SIPA1-210ENST00000534406 CHMP4AQ9BY43 222 aa31.23■■■□□ 2.59
SIPA1-210ENST00000534406 PTGER2P43116 358 aa31.22■■■□□ 2.59
SIPA1-210ENST00000534406 EXOSC9Q06265 439 aaKnown RBP31.22■■■□□ 2.59
SIPA1-210ENST00000534406 USPL1Q5W0Q7 1092 aa31.22■■■□□ 2.59
SIPA1-210ENST00000534406 DZIP3Q86Y13 1208 aaKnown RBP31.22■■■□□ 2.59
SIPA1-210ENST00000534406 ARXQ96QS3 562 aa31.22■■■□□ 2.59
SIPA1-210ENST00000534406 SLFN5Q08AF3 891 aa31.21■■■□□ 2.59
SIPA1-210ENST00000534406 PDIA6Q15084 440 aa31.21■■■□□ 2.59
SIPA1-210ENST00000534406 SGIP1Q9BQI5 828 aa31.21■■■□□ 2.59
SIPA1-210ENST00000534406 DDX21Q9NR30 783 aaKnown RBP eCLIP31.21■■■□□ 2.59
SIPA1-210ENST00000534406 CHPF2Q9P2E5 772 aa31.21■■■□□ 2.59
SIPA1-210ENST00000534406 TBC1D2BQ9UPU7 963 aa31.21■■■□□ 2.59
SIPA1-210ENST00000534406 PROSER3Q2NL68 480 aa31.2■■■□□ 2.59
SIPA1-210ENST00000534406 NLGN1Q8N2Q7 840 aa31.2■■■□□ 2.59
SIPA1-210ENST00000534406 DBF4Q9UBU7 674 aaPredicted RBP31.2■■■□□ 2.59
SIPA1-210ENST00000534406 ANXA1P04083 346 aa31.19■■■□□ 2.58
SIPA1-210ENST00000534406 CDCA7LQ96GN5 454 aa31.19■■■□□ 2.58
SIPA1-210ENST00000534406 ZBED9Q6R2W3 1325 aa31.18■■■□□ 2.58
SIPA1-210ENST00000534406 CAMTA2O94983 1202 aa31.17■■■□□ 2.58
SIPA1-210ENST00000534406 FKBP8Q14318 412 aa31.17■■■□□ 2.58
SIPA1-210ENST00000534406 CCDC30Q5VVM6 783 aa31.17■■■□□ 2.58
SIPA1-210ENST00000534406 LRP10Q7Z4F1 713 aa31.17■■■□□ 2.58
SIPA1-210ENST00000534406 KIF6Q6ZMV9 814 aa31.16■■■□□ 2.58
SIPA1-210ENST00000534406 BCL2L12Q9HB09 334 aa31.16■■■□□ 2.58
SIPA1-210ENST00000534406 PPP1R1BQ9UD71 204 aaPredicted RBP31.15■■■□□ 2.58
SIPA1-210ENST00000534406 HYPKQ9NX55 129 aa31.14■■■□□ 2.58
SIPA1-210ENST00000534406 MMP10P09238 476 aa31.13■■■□□ 2.57
SIPA1-210ENST00000534406 TTLL7Q6ZT98 887 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms