RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 OIP5O43482 229 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 IGHA1P01876 353 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 MSX1P28360 303 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 UBAP2LQ14157 1087 aaKnown RBP8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
CLNS1A-212ENST00000533957 ABCA10Q8WWZ4 1543 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 ABL2P42684 1182 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 MAP2K3P46734 347 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 FOXK2Q01167 660 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 PGBD3Q8N328 593 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 RUBCNLQ9H714 662 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
CLNS1A-212ENST00000533957 TLR1Q15399 786 aa8.64□□□□□ -1.03
CLNS1A-212ENST00000533957 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
CLNS1A-212ENST00000533957 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
CLNS1A-212ENST00000533957 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
CLNS1A-212ENST00000533957 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
CLNS1A-212ENST00000533957 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
CLNS1A-212ENST00000533957 MAP7D1Q3KQU3 841 aa8.63□□□□□ -1.03
CLNS1A-212ENST00000533957 INHAP05111 366 aa8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 SCNN1DP51172 638 aa8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 EFHC2Q5JST6 749 aa8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 PODNQ7Z5L7 613 aa8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 CCER1Q8TC90 406 aaPredicted RBP8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 SOGA1O94964 1423 aa8.62□□□□□ -1.03
CLNS1A-212ENST00000533957 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 GDF10P55107 478 aa8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 SEMA3FQ13275 785 aa8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 C1orf229Q6ZS94 237 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 CRISPLD1Q9H336 500 aa8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 ATXN7L1Q9ULK2 861 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-212ENST00000533957 C2CD2LO14523 706 aa8.6□□□□□ -1.03
CLNS1A-212ENST00000533957 BNIP3LO60238 219 aa8.6□□□□□ -1.03
CLNS1A-212ENST00000533957 ABHD17AQ96GS6 310 aa8.6□□□□□ -1.03
CLNS1A-212ENST00000533957 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
CLNS1A-212ENST00000533957 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 SOX11P35716 441 aa8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 SMTNP53814 917 aa8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 SNRPNP63162 240 aaKnown RBP8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 CTBSQ01459 385 aa8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 PLA2G4EQ3MJ16 856 aa8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 GDF2Q9UK05 429 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 ERICH3Q5RHP9 1530 aa8.59□□□□□ -1.03
CLNS1A-212ENST00000533957 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 MAGI1Q96QZ7 1491 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 TBC1D9Q6ZT07 1266 aa8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 NIFKQ9BYG3 293 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 CUL7Q14999 1698 aa8.58□□□□□ -1.04
CLNS1A-212ENST00000533957 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 ITGB2P05107 769 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 BMP4P12644 408 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 FGFR3P22607 806 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 MCM6Q14566 821 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 AIDAQ96BJ3 306 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 ZCCHC2Q9C0B9 1178 aaKnown RBP8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 SERTAD1Q9UHV2 236 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
CLNS1A-212ENST00000533957 TMEM229AB2RXF0 380 aa8.56□□□□□ -1.04
CLNS1A-212ENST00000533957 MSTNO14793 375 aa8.56□□□□□ -1.04
CLNS1A-212ENST00000533957 C1orf216Q8TAB5 229 aa8.56□□□□□ -1.04
CLNS1A-212ENST00000533957 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
CLNS1A-212ENST00000533957 VPS8Q8N3P4 1428 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 ATP4AP20648 1035 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 FIGNL1Q6PIW4 674 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 NLRP8Q86W28 1048 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 DNAAF2Q9NVR5 837 aaKnown RBP8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 GGA1Q9UJY5 639 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
CLNS1A-212ENST00000533957 CLIP1P30622 1438 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 CLASP1Q7Z460 1538 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 A6NJY4 79 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 CENPBP07199 599 aaPredicted RBP8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 MTFR1Q15390 333 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 ZNF295-AS1Q8N0V1 137 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 IQSEC3Q9UPP2 1182 aaPredicted RBP8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 COG6Q9Y2V7 657 aa8.54□□□□□ -1.04
CLNS1A-212ENST00000533957 SYNJ2O15056 1496 aa8.53□□□□□ -1.04
CLNS1A-212ENST00000533957 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
CLNS1A-212ENST00000533957 ALG2Q9H553 416 aa8.53□□□□□ -1.04
CLNS1A-212ENST00000533957 A0A1W2PNR3 127 aa8.52□□□□□ -1.05
CLNS1A-212ENST00000533957 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
CLNS1A-212ENST00000533957 HOXB4P17483 251 aaPredicted RBP8.52□□□□□ -1.05
CLNS1A-212ENST00000533957 ARSJQ5FYB0 599 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms