RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 COL23A1Q86Y22 540 aaPredicted RBP27.36■■□□□ 1.97
VPS51-211ENST00000533487 IFT57Q9NWB7 429 aa27.36■■□□□ 1.97
VPS51-211ENST00000533487 GNAI1P63096 354 aa27.35■■□□□ 1.97
VPS51-211ENST00000533487 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
VPS51-211ENST00000533487 INTS5Q6P9B9 1019 aaKnown RBP27.34■■□□□ 1.97
VPS51-211ENST00000533487 MIS18AQ9NYP9 233 aa27.34■■□□□ 1.97
VPS51-211ENST00000533487 IL16Q14005 1332 aa27.33■■□□□ 1.97
VPS51-211ENST00000533487 ZNF853P0CG23 659 aa27.32■■□□□ 1.96
VPS51-211ENST00000533487 WWC1Q8IX03 1113 aa27.32■■□□□ 1.96
VPS51-211ENST00000533487 GIGYF1O75420 1035 aaPredicted RBP27.31■■□□□ 1.96
VPS51-211ENST00000533487 MIER1Q8N108 512 aa27.31■■□□□ 1.96
VPS51-211ENST00000533487 PDGFDQ9GZP0 370 aaPredicted RBP27.31■■□□□ 1.96
VPS51-211ENST00000533487 C4AP0C0L4 1744 aa27.3■■□□□ 1.96
VPS51-211ENST00000533487 MSH5O43196 834 aa27.3■■□□□ 1.96
VPS51-211ENST00000533487 WDR63Q8IWG1 891 aa27.3■■□□□ 1.96
VPS51-211ENST00000533487 SOS1Q07889 1333 aaPredicted RBP27.3■■□□□ 1.96
VPS51-211ENST00000533487 A0A087WZG4 1122 aa27.29■■□□□ 1.96
VPS51-211ENST00000533487 PHF14O94880 888 aa27.29■■□□□ 1.96
VPS51-211ENST00000533487 HOXB7P09629 217 aa27.29■■□□□ 1.96
VPS51-211ENST00000533487 IL6STP40189 918 aaPredicted RBP27.29■■□□□ 1.96
VPS51-211ENST00000533487 ERBB4Q15303 1308 aa27.28■■□□□ 1.96
VPS51-211ENST00000533487 ZBTB7AO95365 584 aa27.28■■□□□ 1.96
VPS51-211ENST00000533487 RFC4P35249 363 aa27.28■■□□□ 1.96
VPS51-211ENST00000533487 ZBTB1Q9Y2K1 713 aa27.28■■□□□ 1.96
VPS51-211ENST00000533487 NPM2Q86SE8 214 aaKnown RBP27.27■■□□□ 1.96
VPS51-211ENST00000533487 ARHGEF1Q92888 912 aaKnown RBP27.27■■□□□ 1.96
VPS51-211ENST00000533487 CHMP4AQ9BY43 222 aa27.27■■□□□ 1.96
VPS51-211ENST00000533487 LAS1LQ9Y4W2 734 aaKnown RBP27.27■■□□□ 1.96
VPS51-211ENST00000533487 USP16Q9Y5T5 823 aa27.27■■□□□ 1.96
VPS51-211ENST00000533487 COL15A1P39059 1388 aa27.26■■□□□ 1.95
VPS51-211ENST00000533487 POLD1P28340 1107 aa27.26■■□□□ 1.95
VPS51-211ENST00000533487 EIF5P55010 431 aaKnown RBP27.26■■□□□ 1.95
VPS51-211ENST00000533487 AMIGO3Q86WK7 504 aa27.26■■□□□ 1.95
VPS51-211ENST00000533487 NLGN1Q8N2Q7 840 aa27.24■■□□□ 1.95
VPS51-211ENST00000533487 SGIP1Q9BQI5 828 aa27.24■■□□□ 1.95
VPS51-211ENST00000533487 MBIPQ9NS73 344 aa27.24■■□□□ 1.95
VPS51-211ENST00000533487 PTGER2P43116 358 aa27.23■■□□□ 1.95
VPS51-211ENST00000533487 ATF5Q9Y2D1 282 aaPredicted RBP27.23■■□□□ 1.95
VPS51-211ENST00000533487 USP42Q9H9J4 1324 aaKnown RBP27.22■■□□□ 1.95
VPS51-211ENST00000533487 CANXP27824 592 aaKnown RBP27.22■■□□□ 1.95
VPS51-211ENST00000533487 RGL2O15211 777 aa27.21■■□□□ 1.95
VPS51-211ENST00000533487 ZPR1O75312 459 aa27.21■■□□□ 1.95
VPS51-211ENST00000533487 A1BGP04217 495 aa27.21■■□□□ 1.95
VPS51-211ENST00000533487 NARFQ9UHQ1 456 aa27.21■■□□□ 1.95
VPS51-211ENST00000533487 PRAMEF22A3QJZ6 481 aa27.2■■□□□ 1.94
VPS51-211ENST00000533487 PPP1R1BQ9UD71 204 aaPredicted RBP27.19■■□□□ 1.94
VPS51-211ENST00000533487 GYS1P13807 737 aa27.17■■□□□ 1.94
VPS51-211ENST00000533487 SCN7AQ01118 1682 aa27.17■■□□□ 1.94
VPS51-211ENST00000533487 ZNF521Q96K83 1311 aa27.16■■□□□ 1.94
VPS51-211ENST00000533487 ARXQ96QS3 562 aa27.16■■□□□ 1.94
VPS51-211ENST00000533487 SMIM5Q71RC9 77 aa27.15■■□□□ 1.94
VPS51-211ENST00000533487 MYH16Q9H6N6 1097 aa27.15■■□□□ 1.94
VPS51-211ENST00000533487 BCORQ6W2J9 1755 aa27.14■■□□□ 1.94
VPS51-211ENST00000533487 NBPF26B4DH59 902 aa27.14■■□□□ 1.94
VPS51-211ENST00000533487 DUSP27Q5VZP5 1158 aa27.14■■□□□ 1.94
VPS51-211ENST00000533487 NBPF10Q6P3W6 841 aaKnown RBP27.14■■□□□ 1.94
VPS51-211ENST00000533487 NBPF15Q8N660 670 aa27.14■■□□□ 1.94
VPS51-211ENST00000533487 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.94
VPS51-211ENST00000533487 CLEC4GQ6UXB4 293 aa27.12■■□□□ 1.93
VPS51-211ENST00000533487 EIF2S2P20042 333 aaKnown RBP27.11■■□□□ 1.93
VPS51-211ENST00000533487 GOLGA2Q08379 1002 aa27.11■■□□□ 1.93
VPS51-211ENST00000533487 HDGFL1Q5TGJ6 251 aa27.11■■□□□ 1.93
VPS51-211ENST00000533487 USPL1Q5W0Q7 1092 aa27.11■■□□□ 1.93
VPS51-211ENST00000533487 MSL1Q68DK7 614 aa27.11■■□□□ 1.93
VPS51-211ENST00000533487 DZIP3Q86Y13 1208 aaKnown RBP27.11■■□□□ 1.93
VPS51-211ENST00000533487 ZNF652Q9Y2D9 606 aa27.11■■□□□ 1.93
VPS51-211ENST00000533487 ZNF330Q9Y3S2 320 aaPredicted RBP27.11■■□□□ 1.93
VPS51-211ENST00000533487 DDX21Q9NR30 783 aaKnown RBP eCLIP27.1■■□□□ 1.93
VPS51-211ENST00000533487 DBF4Q9UBU7 674 aaPredicted RBP27.1■■□□□ 1.93
VPS51-211ENST00000533487 SRP68Q9UHB9 627 aaKnown RBP27.1■■□□□ 1.93
VPS51-211ENST00000533487 CACNA1FO60840 1977 aa27.09■■□□□ 1.93
VPS51-211ENST00000533487 FANCIQ9NVI1 1328 aa27.09■■□□□ 1.93
VPS51-211ENST00000533487 ERVV-1B6SEH8 477 aa27.08■■□□□ 1.93
VPS51-211ENST00000533487 MMP10P09238 476 aa27.08■■□□□ 1.93
VPS51-211ENST00000533487 KRT24Q2M2I5 525 aa27.08■■□□□ 1.93
VPS51-211ENST00000533487 E9PSI1 815 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 CAMTA2O94983 1202 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 TM4SF1P30408 202 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 FKBP8Q14318 412 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 PDIA6Q15084 440 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 TSR2Q969E8 191 aaKnown RBP27.07■■□□□ 1.92
VPS51-211ENST00000533487 TBC1D2BQ9UPU7 963 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 PARP3Q9Y6F1 533 aa27.07■■□□□ 1.92
VPS51-211ENST00000533487 SENP3-EIF4A1A0A087X0R7 540 aa27.06■■□□□ 1.92
VPS51-211ENST00000533487 CCDC30Q5VVM6 783 aa27.06■■□□□ 1.92
VPS51-211ENST00000533487 KIF6Q6ZMV9 814 aa27.06■■□□□ 1.92
VPS51-211ENST00000533487 C8orf58Q8NAV2 365 aa27.06■■□□□ 1.92
VPS51-211ENST00000533487 CD2APQ9Y5K6 639 aa27.06■■□□□ 1.92
VPS51-211ENST00000533487 PIP4K2AP48426 406 aaPredicted RBP27.05■■□□□ 1.92
VPS51-211ENST00000533487 BCL2L12Q9HB09 334 aa27.05■■□□□ 1.92
VPS51-211ENST00000533487 HYPKQ9NX55 129 aa27.05■■□□□ 1.92
VPS51-211ENST00000533487 MYL6BP14649 208 aa27.04■■□□□ 1.92
VPS51-211ENST00000533487 TWISTNBQ3B726 338 aaPredicted RBP27.04■■□□□ 1.92
VPS51-211ENST00000533487 LRP10Q7Z4F1 713 aa27.04■■□□□ 1.92
VPS51-211ENST00000533487 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
VPS51-211ENST00000533487 NUP98P52948 1817 aa27.03■■□□□ 1.92
VPS51-211ENST00000533487 MAP3K15Q6ZN16 1313 aa27.03■■□□□ 1.92
VPS51-211ENST00000533487 NRXN2Q9P2S2 1712 aa27.02■■□□□ 1.92
VPS51-211ENST00000533487 CHPF2Q9P2E5 772 aa27.02■■□□□ 1.92
VPS51-211ENST00000533487 NFIXQ14938 502 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms