RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-208ENST00000532181 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
SSH3-208ENST00000532181 CHD4Q14839 1912 aa16.22■□□□□ 0.19
SSH3-208ENST00000532181 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSH3-208ENST00000532181 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
SSH3-208ENST00000532181 ARHGEF1Q92888 912 aaKnown RBP16.22■□□□□ 0.19
SSH3-208ENST00000532181 RTCBQ9Y3I0 505 aaKnown RBP16.22■□□□□ 0.19
SSH3-208ENST00000532181 CICQ96RK0 1608 aaPredicted RBP16.21■□□□□ 0.19
SSH3-208ENST00000532181 TRAPPC3LQ5T215 181 aa16.21■□□□□ 0.19
SSH3-208ENST00000532181 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
SSH3-208ENST00000532181 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
SSH3-208ENST00000532181 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
SSH3-208ENST00000532181 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
SSH3-208ENST00000532181 RC3H1Q5TC82 1133 aaKnown RBP16.2■□□□□ 0.18
SSH3-208ENST00000532181 CHL1O00533 1208 aa16.19■□□□□ 0.18
SSH3-208ENST00000532181 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
SSH3-208ENST00000532181 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
SSH3-208ENST00000532181 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
SSH3-208ENST00000532181 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
SSH3-208ENST00000532181 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
SSH3-208ENST00000532181 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
SSH3-208ENST00000532181 CCER2I3L3R5 266 aa16.18■□□□□ 0.18
SSH3-208ENST00000532181 A1BGP04217 495 aa16.18■□□□□ 0.18
SSH3-208ENST00000532181 MMP10P09238 476 aa16.18■□□□□ 0.18
SSH3-208ENST00000532181 PIP4K2AP48426 406 aaPredicted RBP16.18■□□□□ 0.18
SSH3-208ENST00000532181 ZNF784Q8NCA9 323 aaPredicted RBP16.18■□□□□ 0.18
SSH3-208ENST00000532181 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
SSH3-208ENST00000532181 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
SSH3-208ENST00000532181 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
SSH3-208ENST00000532181 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
SSH3-208ENST00000532181 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
SSH3-208ENST00000532181 RFC4P35249 363 aa16.17■□□□□ 0.18
SSH3-208ENST00000532181 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
SSH3-208ENST00000532181 UTRNP46939 3433 aa16.17■□□□□ 0.18
SSH3-208ENST00000532181 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
SSH3-208ENST00000532181 GYS1P13807 737 aa16.16■□□□□ 0.18
SSH3-208ENST00000532181 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
SSH3-208ENST00000532181 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
SSH3-208ENST00000532181 NBPF26B4DH59 902 aa16.15■□□□□ 0.18
SSH3-208ENST00000532181 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
SSH3-208ENST00000532181 NBPF10Q6P3W6 841 aaKnown RBP16.15■□□□□ 0.18
SSH3-208ENST00000532181 NBPF15Q8N660 670 aa16.15■□□□□ 0.18
SSH3-208ENST00000532181 TSPYL4Q9UJ04 414 aa16.15■□□□□ 0.18
SSH3-208ENST00000532181 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
SSH3-208ENST00000532181 SOS1Q07889 1333 aaPredicted RBP16.15■□□□□ 0.18
SSH3-208ENST00000532181 SNRPA1P09661 255 aaKnown RBP16.14■□□□□ 0.17
SSH3-208ENST00000532181 ADRA2BP18089 450 aa16.14■□□□□ 0.17
SSH3-208ENST00000532181 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
SSH3-208ENST00000532181 CCDC27Q2M243 656 aa16.13■□□□□ 0.17
SSH3-208ENST00000532181 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
SSH3-208ENST00000532181 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
SSH3-208ENST00000532181 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
SSH3-208ENST00000532181 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
SSH3-208ENST00000532181 EIF5P55010 431 aaKnown RBP16.12■□□□□ 0.17
SSH3-208ENST00000532181 FKBP8Q14318 412 aa16.12■□□□□ 0.17
SSH3-208ENST00000532181 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
SSH3-208ENST00000532181 N4BP2Q86UW6 1770 aaPredicted RBP16.12■□□□□ 0.17
SSH3-208ENST00000532181 STARD3NLO95772 234 aa16.11■□□□□ 0.17
SSH3-208ENST00000532181 BCL2L12Q9HB09 334 aa16.11■□□□□ 0.17
SSH3-208ENST00000532181 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
SSH3-208ENST00000532181 A0A0G2JLW4 131 aa16.1■□□□□ 0.17
SSH3-208ENST00000532181 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
SSH3-208ENST00000532181 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
SSH3-208ENST00000532181 PARP3Q9Y6F1 533 aa16.1■□□□□ 0.17
SSH3-208ENST00000532181 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
SSH3-208ENST00000532181 GOLGB1Q14789 3259 aaKnown RBP16.1■□□□□ 0.17
SSH3-208ENST00000532181 KIAA1551Q9HCM1 1747 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 DDR1Q08345 913 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 PDIA6Q15084 440 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 LRP10Q7Z4F1 713 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
SSH3-208ENST00000532181 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 ZNF521Q96K83 1311 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
SSH3-208ENST00000532181 PROSER3Q2NL68 480 aa16.08■□□□□ 0.16
SSH3-208ENST00000532181 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
SSH3-208ENST00000532181 TSPYL6Q8N831 410 aa16.08■□□□□ 0.16
SSH3-208ENST00000532181 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.16
SSH3-208ENST00000532181 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
SSH3-208ENST00000532181 ZPR1O75312 459 aa16.07■□□□□ 0.16
SSH3-208ENST00000532181 ANXA1P04083 346 aa16.07■□□□□ 0.16
SSH3-208ENST00000532181 DPEP1P16444 411 aa16.07■□□□□ 0.16
SSH3-208ENST00000532181 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
SSH3-208ENST00000532181 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
SSH3-208ENST00000532181 COL15A1P39059 1388 aa16.07■□□□□ 0.16
SSH3-208ENST00000532181 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
SSH3-208ENST00000532181 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
SSH3-208ENST00000532181 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
SSH3-208ENST00000532181 TM4SF1P30408 202 aa16.05■□□□□ 0.16
SSH3-208ENST00000532181 GNAI1P63096 354 aa16.05■□□□□ 0.16
SSH3-208ENST00000532181 DUSP27Q5VZP5 1158 aa16.05■□□□□ 0.16
SSH3-208ENST00000532181 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
SSH3-208ENST00000532181 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
SSH3-208ENST00000532181 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
SSH3-208ENST00000532181 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
SSH3-208ENST00000532181 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
SSH3-208ENST00000532181 TGFB2P61812 414 aa16.04■□□□□ 0.16
SSH3-208ENST00000532181 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
SSH3-208ENST00000532181 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
SSH3-208ENST00000532181 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms