RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 TRAPPC3LQ5T215 181 aa14.26□□□□□ -0.13
GPATCH4-216ENST00000531900 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
GPATCH4-216ENST00000531900 FMNL2Q96PY5 1086 aa14.26□□□□□ -0.13
GPATCH4-216ENST00000531900 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
GPATCH4-216ENST00000531900 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
GPATCH4-216ENST00000531900 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
GPATCH4-216ENST00000531900 CCDC87Q9NVE4 849 aa14.25□□□□□ -0.13
GPATCH4-216ENST00000531900 KCNQ3O43525 872 aa14.24□□□□□ -0.13
GPATCH4-216ENST00000531900 STARD3NLO95772 234 aa14.24□□□□□ -0.13
GPATCH4-216ENST00000531900 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
GPATCH4-216ENST00000531900 ARHGEF1Q92888 912 aaKnown RBP14.24□□□□□ -0.13
GPATCH4-216ENST00000531900 SOS1Q07889 1333 aaPredicted RBP14.23□□□□□ -0.13
GPATCH4-216ENST00000531900 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
GPATCH4-216ENST00000531900 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
GPATCH4-216ENST00000531900 TRIM35Q9UPQ4 493 aa14.23□□□□□ -0.13
GPATCH4-216ENST00000531900 C4AP0C0L4 1744 aa14.23□□□□□ -0.13
GPATCH4-216ENST00000531900 CHD4Q14839 1912 aa14.23□□□□□ -0.13
GPATCH4-216ENST00000531900 SNRPA1P09661 255 aaKnown RBP14.22□□□□□ -0.13
GPATCH4-216ENST00000531900 RFC4P35249 363 aa14.22□□□□□ -0.13
GPATCH4-216ENST00000531900 NLGN1Q8N2Q7 840 aa14.22□□□□□ -0.13
GPATCH4-216ENST00000531900 EIF5P55010 431 aaKnown RBP14.21□□□□□ -0.13
GPATCH4-216ENST00000531900 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
GPATCH4-216ENST00000531900 USP42Q9H9J4 1324 aaKnown RBP14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 GYS1P13807 737 aa14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 THUMPD2Q9BTF0 503 aaKnown RBP14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 MRS2Q9HD23 443 aa14.2□□□□□ -0.14
GPATCH4-216ENST00000531900 CHL1O00533 1208 aa14.19□□□□□ -0.14
GPATCH4-216ENST00000531900 GIGYF1O75420 1035 aaPredicted RBP14.19□□□□□ -0.14
GPATCH4-216ENST00000531900 MMP10P09238 476 aa14.19□□□□□ -0.14
GPATCH4-216ENST00000531900 MIS18AQ9NYP9 233 aa14.19□□□□□ -0.14
GPATCH4-216ENST00000531900 NARFQ9UHQ1 456 aa14.19□□□□□ -0.14
GPATCH4-216ENST00000531900 USP16Q9Y5T5 823 aa14.19□□□□□ -0.14
GPATCH4-216ENST00000531900 APAF1O14727 1248 aa14.18□□□□□ -0.14
GPATCH4-216ENST00000531900 CCDC27Q2M243 656 aa14.18□□□□□ -0.14
GPATCH4-216ENST00000531900 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
GPATCH4-216ENST00000531900 COL15A1P39059 1388 aa14.18□□□□□ -0.14
GPATCH4-216ENST00000531900 LAMB4A4D0S4 1761 aa14.17□□□□□ -0.14
GPATCH4-216ENST00000531900 A0A087WZG4 1122 aa14.17□□□□□ -0.14
GPATCH4-216ENST00000531900 RGL2O15211 777 aa14.17□□□□□ -0.14
GPATCH4-216ENST00000531900 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
GPATCH4-216ENST00000531900 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
GPATCH4-216ENST00000531900 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
GPATCH4-216ENST00000531900 ZNF853P0CG23 659 aa14.16□□□□□ -0.14
GPATCH4-216ENST00000531900 TM4SF1P30408 202 aa14.16□□□□□ -0.14
GPATCH4-216ENST00000531900 CFAP44Q96MT7 982 aa14.16□□□□□ -0.14
GPATCH4-216ENST00000531900 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
GPATCH4-216ENST00000531900 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
GPATCH4-216ENST00000531900 ZPR1O75312 459 aa14.15□□□□□ -0.14
GPATCH4-216ENST00000531900 A1BGP04217 495 aa14.15□□□□□ -0.14
GPATCH4-216ENST00000531900 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.14
GPATCH4-216ENST00000531900 TGFB2P61812 414 aa14.15□□□□□ -0.14
GPATCH4-216ENST00000531900 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 FKBP8Q14318 412 aa14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 BCL2L12Q9HB09 334 aa14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
GPATCH4-216ENST00000531900 USPL1Q5W0Q7 1092 aa14.13□□□□□ -0.15
GPATCH4-216ENST00000531900 NGEFQ8N5V2 710 aa14.13□□□□□ -0.15
GPATCH4-216ENST00000531900 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
GPATCH4-216ENST00000531900 SCN7AQ01118 1682 aa14.12□□□□□ -0.15
GPATCH4-216ENST00000531900 HOXB7P09629 217 aa14.12□□□□□ -0.15
GPATCH4-216ENST00000531900 CLEC4GQ6UXB4 293 aa14.12□□□□□ -0.15
GPATCH4-216ENST00000531900 WWC3Q9ULE0 1092 aa14.12□□□□□ -0.15
GPATCH4-216ENST00000531900 CCER2I3L3R5 266 aa14.11□□□□□ -0.15
GPATCH4-216ENST00000531900 GNAI1P63096 354 aa14.11□□□□□ -0.15
GPATCH4-216ENST00000531900 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
GPATCH4-216ENST00000531900 BCORQ6W2J9 1755 aa14.11□□□□□ -0.15
GPATCH4-216ENST00000531900 C10orf71Q711Q0 1435 aa14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 DDR1Q08345 913 aa14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 LRP10Q7Z4F1 713 aa14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 NPM2Q86SE8 214 aaKnown RBP14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 IL16Q14005 1332 aa14.1□□□□□ -0.15
GPATCH4-216ENST00000531900 A0A0G2JLW4 131 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 C1QTNF8P60827 252 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 NFIXQ14938 502 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 TBC1D2BQ9UPU7 963 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
GPATCH4-216ENST00000531900 PXDNLA1KZ92 1463 aa14.08□□□□□ -0.16
GPATCH4-216ENST00000531900 PDIA6Q15084 440 aa14.08□□□□□ -0.16
GPATCH4-216ENST00000531900 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
GPATCH4-216ENST00000531900 ERVV-1B6SEH8 477 aa14.07□□□□□ -0.16
GPATCH4-216ENST00000531900 DPEP1P16444 411 aa14.07□□□□□ -0.16
GPATCH4-216ENST00000531900 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
GPATCH4-216ENST00000531900 GPBP1L1Q9HC44 474 aaPredicted RBP14.07□□□□□ -0.16
GPATCH4-216ENST00000531900 NUP98P52948 1817 aa14.06□□□□□ -0.16
GPATCH4-216ENST00000531900 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
GPATCH4-216ENST00000531900 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
GPATCH4-216ENST00000531900 PIM2Q9P1W9 311 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms