RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	KDM3B	Q7LBC6	1761 aa		33.88	■■■■□ 3.01
PICALM-215	ENST00000531558	MSL1	Q68DK7	614 aa		33.87	■■■■□ 3.01
PICALM-215	ENST00000531558	POLD1	P28340	1107 aa		33.86	■■■■□ 3.01
PICALM-215	ENST00000531558	ARHGEF1	Q92888	912 aa	Known RBP	33.86	■■■■□ 3.01
PICALM-215	ENST00000531558	ZBTB1	Q9Y2K1	713 aa		33.86	■■■■□ 3.01
PICALM-215	ENST00000531558	SOS1	Q07889	1333 aa	Predicted RBP	33.85	■■■■□ 3.01
PICALM-215	ENST00000531558	SNRPA1	P09661	255 aa	Known RBP	33.84	■■■■□ 3.01
PICALM-215	ENST00000531558	BABAM1	Q9NWV8	329 aa		33.83	■■■■□ 3.01
PICALM-215	ENST00000531558	TSPYL4	Q9UJ04	414 aa		33.83	■■■■□ 3.01
PICALM-215	ENST00000531558	RFC4	P35249	363 aa		33.82	■■■■□ 3
PICALM-215	ENST00000531558	ARX	Q96QS3	562 aa		33.82	■■■■□ 3
PICALM-215	ENST00000531558	PRAMEF22	A3QJZ6	481 aa		33.81	■■■■□ 3
PICALM-215	ENST00000531558	C4A	P0C0L4	1744 aa		33.81	■■■■□ 3
PICALM-215	ENST00000531558	EIF4A1	P60842	406 aa	Known RBP	33.8	■■■■□ 3
PICALM-215	ENST00000531558	COL15A1	P39059	1388 aa		33.79	■■■■□ 3
PICALM-215	ENST00000531558	CANX	P27824	592 aa	Known RBP	33.78	■■■■□ 3
PICALM-215	ENST00000531558	USP16	Q9Y5T5	823 aa		33.78	■■■■□ 3
PICALM-215	ENST00000531558	USP42	Q9H9J4	1324 aa	Known RBP	33.77	■■■■□ 3
PICALM-215	ENST00000531558	GIGYF1	O75420	1035 aa	Predicted RBP	33.75	■■■□□ 2.99
PICALM-215	ENST00000531558	A1BG	P04217	495 aa		33.75	■■■□□ 2.99
PICALM-215	ENST00000531558	GYS1	P13807	737 aa		33.75	■■■□□ 2.99
PICALM-215	ENST00000531558	FAM9B	Q8IZU0	186 aa		33.75	■■■□□ 2.99
PICALM-215	ENST00000531558	CHL1	O00533	1208 aa		33.74	■■■□□ 2.99
PICALM-215	ENST00000531558	EIF5	P55010	431 aa	Known RBP	33.74	■■■□□ 2.99
PICALM-215	ENST00000531558	SRP68	Q9UHB9	627 aa	Known RBP	33.74	■■■□□ 2.99
PICALM-215	ENST00000531558	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.73	■■■□□ 2.99
PICALM-215	ENST00000531558	IL6ST	P40189	918 aa	Predicted RBP	33.72	■■■□□ 2.99
PICALM-215	ENST00000531558	NLGN1	Q8N2Q7	840 aa		33.72	■■■□□ 2.99
PICALM-215	ENST00000531558	LAS1L	Q9Y4W2	734 aa	Known RBP	33.72	■■■□□ 2.99
PICALM-215	ENST00000531558	LAMB4	A4D0S4	1761 aa		33.72	■■■□□ 2.99
PICALM-215	ENST00000531558	CALD1	Q05682	793 aa	Known RBP	33.71	■■■□□ 2.99
PICALM-215	ENST00000531558	CFAP44	Q96MT7	982 aa		33.7	■■■□□ 2.99
PICALM-215	ENST00000531558		A0A087WZG4	1122 aa		33.69	■■■□□ 2.98
PICALM-215	ENST00000531558	SENP3-EIF4A1	A0A087X0R7	540 aa		33.69	■■■□□ 2.98
PICALM-215	ENST00000531558	ZPR1	O75312	459 aa		33.69	■■■□□ 2.98
PICALM-215	ENST00000531558	CCDC27	Q2M243	656 aa		33.69	■■■□□ 2.98
PICALM-215	ENST00000531558	DIEXF	Q68CQ4	756 aa	Known RBP	33.69	■■■□□ 2.98
PICALM-215	ENST00000531558	NARF	Q9UHQ1	456 aa		33.69	■■■□□ 2.98
PICALM-215	ENST00000531558	CCER2	I3L3R5	266 aa		33.68	■■■□□ 2.98
PICALM-215	ENST00000531558	MMP10	P09238	476 aa		33.68	■■■□□ 2.98
PICALM-215	ENST00000531558	NCBP3	Q53F19	620 aa	Known RBP	33.68	■■■□□ 2.98
PICALM-215	ENST00000531558	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.68	■■■□□ 2.98
PICALM-215	ENST00000531558	PIP4K2A	P48426	406 aa	Predicted RBP	33.67	■■■□□ 2.98
PICALM-215	ENST00000531558	USPL1	Q5W0Q7	1092 aa		33.67	■■■□□ 2.98
PICALM-215	ENST00000531558	SYT17	Q9BSW7	474 aa		33.67	■■■□□ 2.98
PICALM-215	ENST00000531558	IFT57	Q9NWB7	429 aa		33.67	■■■□□ 2.98
PICALM-215	ENST00000531558	ZNF853	P0CG23	659 aa		33.66	■■■□□ 2.98
PICALM-215	ENST00000531558	FKBP8	Q14318	412 aa		33.66	■■■□□ 2.98
PICALM-215	ENST00000531558	NBPF26	B4DH59	902 aa		33.65	■■■□□ 2.98
PICALM-215	ENST00000531558	NBPF10	Q6P3W6	841 aa	Known RBP	33.65	■■■□□ 2.98
PICALM-215	ENST00000531558	NBPF15	Q8N660	670 aa		33.65	■■■□□ 2.98
PICALM-215	ENST00000531558	NPM2	Q86SE8	214 aa	Known RBP	33.64	■■■□□ 2.98
PICALM-215	ENST00000531558	WWC1	Q8IX03	1113 aa		33.64	■■■□□ 2.98
PICALM-215	ENST00000531558	KLHL34	Q8N239	644 aa		33.64	■■■□□ 2.98
PICALM-215	ENST00000531558	GNAI1	P63096	354 aa		33.63	■■■□□ 2.97
PICALM-215	ENST00000531558	MBIP	Q9NS73	344 aa		33.63	■■■□□ 2.97
PICALM-215	ENST00000531558	BCL2L12	Q9HB09	334 aa		33.61	■■■□□ 2.97
PICALM-215	ENST00000531558	TBC1D2B	Q9UPU7	963 aa		33.61	■■■□□ 2.97
PICALM-215	ENST00000531558	KRT24	Q2M2I5	525 aa		33.6	■■■□□ 2.97
PICALM-215	ENST00000531558	SCN7A	Q01118	1682 aa		33.6	■■■□□ 2.97
PICALM-215	ENST00000531558	ERBB4	Q15303	1308 aa		33.58	■■■□□ 2.97
PICALM-215	ENST00000531558	DZIP3	Q86Y13	1208 aa	Known RBP	33.58	■■■□□ 2.97
PICALM-215	ENST00000531558	DDR1	Q08345	913 aa		33.57	■■■□□ 2.96
PICALM-215	ENST00000531558	CD2AP	Q9Y5K6	639 aa		33.57	■■■□□ 2.96
PICALM-215	ENST00000531558	PARP3	Q9Y6F1	533 aa		33.57	■■■□□ 2.96
PICALM-215	ENST00000531558	CAMTA2	O94983	1202 aa		33.56	■■■□□ 2.96
PICALM-215	ENST00000531558	EIF2S2	P20042	333 aa	Known RBP	33.56	■■■□□ 2.96
PICALM-215	ENST00000531558	TM4SF1	P30408	202 aa		33.56	■■■□□ 2.96
PICALM-215	ENST00000531558	SALL2	Q9Y467	1007 aa	Predicted RBP	33.56	■■■□□ 2.96
PICALM-215	ENST00000531558	IL16	Q14005	1332 aa		33.54	■■■□□ 2.96
PICALM-215	ENST00000531558	HOXB7	P09629	217 aa		33.54	■■■□□ 2.96
PICALM-215	ENST00000531558	NFIX	Q14938	502 aa		33.54	■■■□□ 2.96
PICALM-215	ENST00000531558	NGEF	Q8N5V2	710 aa		33.54	■■■□□ 2.96
PICALM-215	ENST00000531558	NLGN2	Q8NFZ4	835 aa		33.54	■■■□□ 2.96
PICALM-215	ENST00000531558	BCOR	Q6W2J9	1755 aa		33.52	■■■□□ 2.96
PICALM-215	ENST00000531558	POLRMT	O00411	1230 aa	Known RBP	33.52	■■■□□ 2.96
PICALM-215	ENST00000531558	C10orf71	Q711Q0	1435 aa		33.52	■■■□□ 2.96
PICALM-215	ENST00000531558	MYL6B	P14649	208 aa		33.51	■■■□□ 2.95
PICALM-215	ENST00000531558	MIER1	Q8N108	512 aa		33.51	■■■□□ 2.95
PICALM-215	ENST00000531558	DUSP27	Q5VZP5	1158 aa		33.5	■■■□□ 2.95
PICALM-215	ENST00000531558	PDIA6	Q15084	440 aa		33.49	■■■□□ 2.95
PICALM-215	ENST00000531558	WDR63	Q8IWG1	891 aa		33.49	■■■□□ 2.95
PICALM-215	ENST00000531558	NECTIN2	Q92692	538 aa		33.49	■■■□□ 2.95
PICALM-215	ENST00000531558	TBC1D9B	Q66K14	1250 aa		33.48	■■■□□ 2.95
PICALM-215	ENST00000531558	TSR2	Q969E8	191 aa	Known RBP	33.48	■■■□□ 2.95
PICALM-215	ENST00000531558	RGL2	O15211	777 aa		33.47	■■■□□ 2.95
PICALM-215	ENST00000531558	PROSER3	Q2NL68	480 aa		33.47	■■■□□ 2.95
PICALM-215	ENST00000531558	HDGFL1	Q5TGJ6	251 aa		33.47	■■■□□ 2.95
PICALM-215	ENST00000531558	BICDL1	Q6ZP65	573 aa		33.47	■■■□□ 2.95
PICALM-215	ENST00000531558	LRP10	Q7Z4F1	713 aa		33.47	■■■□□ 2.95
PICALM-215	ENST00000531558	CLEC4G	Q6UXB4	293 aa		33.46	■■■□□ 2.95
PICALM-215	ENST00000531558	ZNF652	Q9Y2D9	606 aa		33.46	■■■□□ 2.95
PICALM-215	ENST00000531558	ANXA1	P04083	346 aa		33.44	■■■□□ 2.94
PICALM-215	ENST00000531558	KIF6	Q6ZMV9	814 aa		33.44	■■■□□ 2.94
PICALM-215	ENST00000531558	TTLL7	Q6ZT98	887 aa		33.44	■■■□□ 2.94
PICALM-215	ENST00000531558	C8orf58	Q8NAV2	365 aa		33.44	■■■□□ 2.94
PICALM-215	ENST00000531558	KIF13B	Q9NQT8	1826 aa		33.44	■■■□□ 2.94
PICALM-215	ENST00000531558	SERPINB2	P05120	415 aa		33.43	■■■□□ 2.94
PICALM-215	ENST00000531558	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.43	■■■□□ 2.94
PICALM-215	ENST00000531558	CARMIL3	Q8ND23	1372 aa		33.43	■■■□□ 2.94

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