RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 PTGER2P43116 358 aa15.58■□□□□ 0.08
LTBP3-219ENST00000530990 SLC16A10Q8TF71 515 aa15.58■□□□□ 0.08
LTBP3-219ENST00000530990 ZBTB1Q9Y2K1 713 aa15.58■□□□□ 0.08
LTBP3-219ENST00000530990 MSL1Q68DK7 614 aa15.57■□□□□ 0.08
LTBP3-219ENST00000530990 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
LTBP3-219ENST00000530990 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
LTBP3-219ENST00000530990 BCORQ6W2J9 1755 aa15.57■□□□□ 0.08
LTBP3-219ENST00000530990 ADRA2BP18089 450 aa15.56■□□□□ 0.08
LTBP3-219ENST00000530990 SOS1Q07889 1333 aaPredicted RBP15.56■□□□□ 0.08
LTBP3-219ENST00000530990 COL15A1P39059 1388 aa15.56■□□□□ 0.08
LTBP3-219ENST00000530990 STARD3NLO95772 234 aa15.55■□□□□ 0.08
LTBP3-219ENST00000530990 SNRPA1P09661 255 aaKnown RBP15.55■□□□□ 0.08
LTBP3-219ENST00000530990 EIF4A1P60842 406 aaKnown RBP15.55■□□□□ 0.08
LTBP3-219ENST00000530990 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
LTBP3-219ENST00000530990 ARHGEF1Q92888 912 aaKnown RBP15.55■□□□□ 0.08
LTBP3-219ENST00000530990 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
LTBP3-219ENST00000530990 PPP1R1BQ9UD71 204 aaPredicted RBP15.55■□□□□ 0.08
LTBP3-219ENST00000530990 CCER2I3L3R5 266 aa15.54■□□□□ 0.08
LTBP3-219ENST00000530990 CANXP27824 592 aaKnown RBP15.54■□□□□ 0.08
LTBP3-219ENST00000530990 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
LTBP3-219ENST00000530990 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
LTBP3-219ENST00000530990 USP16Q9Y5T5 823 aa15.54■□□□□ 0.08
LTBP3-219ENST00000530990 USP42Q9H9J4 1324 aaKnown RBP15.52■□□□□ 0.08
LTBP3-219ENST00000530990 CHL1O00533 1208 aa15.52■□□□□ 0.08
LTBP3-219ENST00000530990 GIGYF1O75420 1035 aaPredicted RBP15.52■□□□□ 0.08
LTBP3-219ENST00000530990 A1BGP04217 495 aa15.52■□□□□ 0.08
LTBP3-219ENST00000530990 RFC4P35249 363 aa15.52■□□□□ 0.08
LTBP3-219ENST00000530990 PIP4K2AP48426 406 aaPredicted RBP15.52■□□□□ 0.08
LTBP3-219ENST00000530990 SRP68Q9UHB9 627 aaKnown RBP15.52■□□□□ 0.08
LTBP3-219ENST00000530990 POLD1P28340 1107 aa15.51■□□□□ 0.07
LTBP3-219ENST00000530990 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
LTBP3-219ENST00000530990 MIER1Q8N108 512 aa15.51■□□□□ 0.07
LTBP3-219ENST00000530990 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
LTBP3-219ENST00000530990 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 GYS1P13807 737 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
LTBP3-219ENST00000530990 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 WWC1Q8IX03 1113 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 ARXQ96QS3 562 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 MBIPQ9NS73 344 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 IFT57Q9NWB7 429 aa15.5■□□□□ 0.07
LTBP3-219ENST00000530990 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
LTBP3-219ENST00000530990 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
LTBP3-219ENST00000530990 IL6STP40189 918 aaPredicted RBP15.49■□□□□ 0.07
LTBP3-219ENST00000530990 CALD1Q05682 793 aaKnown RBP15.49■□□□□ 0.07
LTBP3-219ENST00000530990 KIF13BQ9NQT8 1826 aa15.49■□□□□ 0.07
LTBP3-219ENST00000530990 AFDNP55196 1824 aaKnown RBP15.48■□□□□ 0.07
LTBP3-219ENST00000530990 NBPF26B4DH59 902 aa15.48■□□□□ 0.07
LTBP3-219ENST00000530990 GNAI1P63096 354 aa15.48■□□□□ 0.07
LTBP3-219ENST00000530990 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
LTBP3-219ENST00000530990 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
LTBP3-219ENST00000530990 NBPF10Q6P3W6 841 aaKnown RBP15.48■□□□□ 0.07
LTBP3-219ENST00000530990 NBPF15Q8N660 670 aa15.48■□□□□ 0.07
LTBP3-219ENST00000530990 ZPR1O75312 459 aa15.47■□□□□ 0.07
LTBP3-219ENST00000530990 FHDC1Q9C0D6 1143 aaPredicted RBP15.47■□□□□ 0.07
LTBP3-219ENST00000530990 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
LTBP3-219ENST00000530990 NRXN2Q9P2S2 1712 aa15.46■□□□□ 0.07
LTBP3-219ENST00000530990 A0A087WZG4 1122 aa15.46■□□□□ 0.07
LTBP3-219ENST00000530990 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
LTBP3-219ENST00000530990 MMP10P09238 476 aa15.46■□□□□ 0.07
LTBP3-219ENST00000530990 FKBP8Q14318 412 aa15.46■□□□□ 0.07
LTBP3-219ENST00000530990 KIAA1551Q9HCM1 1747 aa15.46■□□□□ 0.06
LTBP3-219ENST00000530990 NUP98P52948 1817 aa15.45■□□□□ 0.06
LTBP3-219ENST00000530990 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
LTBP3-219ENST00000530990 NLGN1Q8N2Q7 840 aa15.45■□□□□ 0.06
LTBP3-219ENST00000530990 TSR2Q969E8 191 aaKnown RBP15.45■□□□□ 0.06
LTBP3-219ENST00000530990 BCL2L12Q9HB09 334 aa15.45■□□□□ 0.06
LTBP3-219ENST00000530990 TBC1D2BQ9UPU7 963 aa15.45■□□□□ 0.06
LTBP3-219ENST00000530990 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
LTBP3-219ENST00000530990 NPM2Q86SE8 214 aaKnown RBP15.44■□□□□ 0.06
LTBP3-219ENST00000530990 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
LTBP3-219ENST00000530990 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
LTBP3-219ENST00000530990 IL16Q14005 1332 aa15.43■□□□□ 0.06
LTBP3-219ENST00000530990 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
LTBP3-219ENST00000530990 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
LTBP3-219ENST00000530990 MYL6BP14649 208 aa15.43■□□□□ 0.06
LTBP3-219ENST00000530990 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
LTBP3-219ENST00000530990 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 N4BP2Q86UW6 1770 aaPredicted RBP15.42■□□□□ 0.06
LTBP3-219ENST00000530990 HOXB7P09629 217 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 DDR1Q08345 913 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 NGEFQ8N5V2 710 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 FANCIQ9NVI1 1328 aa15.42■□□□□ 0.06
LTBP3-219ENST00000530990 ANXA1P04083 346 aa15.41■□□□□ 0.06
LTBP3-219ENST00000530990 NFIXQ14938 502 aa15.41■□□□□ 0.06
LTBP3-219ENST00000530990 PDIA6Q15084 440 aa15.41■□□□□ 0.06
LTBP3-219ENST00000530990 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
LTBP3-219ENST00000530990 LRP10Q7Z4F1 713 aa15.41■□□□□ 0.06
LTBP3-219ENST00000530990 POLRMTO00411 1230 aaKnown RBP15.4■□□□□ 0.06
LTBP3-219ENST00000530990 ELL2O00472 640 aaPredicted RBP15.4■□□□□ 0.06
LTBP3-219ENST00000530990 TM4SF1P30408 202 aa15.4■□□□□ 0.06
LTBP3-219ENST00000530990 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
LTBP3-219ENST00000530990 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
LTBP3-219ENST00000530990 NLGN2Q8NFZ4 835 aa15.4■□□□□ 0.06
LTBP3-219ENST00000530990 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms