RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
BRK1-201ENST00000530758 SLFN5Q08AF3 891 aa20.84■□□□□ 0.93
BRK1-201ENST00000530758 STK32BQ9NY57 414 aa20.84■□□□□ 0.93
BRK1-201ENST00000530758 SOS1Q07889 1333 aaPredicted RBP20.83■□□□□ 0.93
BRK1-201ENST00000530758 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
BRK1-201ENST00000530758 E9PSI1 815 aa20.83■□□□□ 0.93
BRK1-201ENST00000530758 STARD3NLO95772 234 aa20.83■□□□□ 0.93
BRK1-201ENST00000530758 HOXB7P09629 217 aa20.83■□□□□ 0.93
BRK1-201ENST00000530758 MYH16Q9H6N6 1097 aa20.83■□□□□ 0.93
BRK1-201ENST00000530758 USP16Q9Y5T5 823 aa20.83■□□□□ 0.93
BRK1-201ENST00000530758 UBR3Q6ZT12 1888 aa20.83■□□□□ 0.92
BRK1-201ENST00000530758 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
BRK1-201ENST00000530758 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
BRK1-201ENST00000530758 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
BRK1-201ENST00000530758 TSR2Q969E8 191 aaKnown RBP20.81■□□□□ 0.92
BRK1-201ENST00000530758 CRKLP46109 303 aaKnown RBP20.8■□□□□ 0.92
BRK1-201ENST00000530758 SPON1Q9HCB6 807 aa20.8■□□□□ 0.92
BRK1-201ENST00000530758 RPS6KA4O75676 772 aa20.79■□□□□ 0.92
BRK1-201ENST00000530758 KRT24Q2M2I5 525 aa20.79■□□□□ 0.92
BRK1-201ENST00000530758 C8orf58Q8NAV2 365 aa20.79■□□□□ 0.92
BRK1-201ENST00000530758 CDCA7LQ96GN5 454 aa20.79■□□□□ 0.92
BRK1-201ENST00000530758 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
BRK1-201ENST00000530758 ZBTB7AO95365 584 aa20.78■□□□□ 0.92
BRK1-201ENST00000530758 DUSP27Q5VZP5 1158 aa20.78■□□□□ 0.92
BRK1-201ENST00000530758 PTGER2P43116 358 aa20.77■□□□□ 0.92
BRK1-201ENST00000530758 AK7Q96M32 723 aa20.77■□□□□ 0.92
BRK1-201ENST00000530758 ERBB4Q15303 1308 aa20.77■□□□□ 0.91
BRK1-201ENST00000530758 SSFA2P28290 1259 aa20.76■□□□□ 0.91
BRK1-201ENST00000530758 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
BRK1-201ENST00000530758 CHMP4AQ9BY43 222 aa20.76■□□□□ 0.91
BRK1-201ENST00000530758 COL24A1Q17RW2 1714 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 A1BGP04217 495 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 ADRA2BP18089 450 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
BRK1-201ENST00000530758 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
BRK1-201ENST00000530758 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
BRK1-201ENST00000530758 TSPYL6Q8N831 410 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 RTCBQ9Y3I0 505 aaKnown RBP20.75■□□□□ 0.91
BRK1-201ENST00000530758 CACNA1FO60840 1977 aa20.75■□□□□ 0.91
BRK1-201ENST00000530758 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
BRK1-201ENST00000530758 GNPATO15228 680 aa20.74■□□□□ 0.91
BRK1-201ENST00000530758 VAMP4O75379 141 aa20.74■□□□□ 0.91
BRK1-201ENST00000530758 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
BRK1-201ENST00000530758 AMIGO3Q86WK7 504 aa20.74■□□□□ 0.91
BRK1-201ENST00000530758 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
BRK1-201ENST00000530758 ATF5Q9Y2D1 282 aaPredicted RBP20.74■□□□□ 0.91
BRK1-201ENST00000530758 PNPLA7Q6ZV29 1317 aa20.74■□□□□ 0.91
BRK1-201ENST00000530758 PDIA6Q15084 440 aa20.73■□□□□ 0.91
BRK1-201ENST00000530758 TWISTNBQ3B726 338 aaPredicted RBP20.73■□□□□ 0.91
BRK1-201ENST00000530758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.71■□□□□ 0.91
BRK1-201ENST00000530758 ELL2O00472 640 aaPredicted RBP20.71■□□□□ 0.91
BRK1-201ENST00000530758 EIF2S2P20042 333 aaKnown RBP20.71■□□□□ 0.91
BRK1-201ENST00000530758 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
BRK1-201ENST00000530758 LRP10Q7Z4F1 713 aa20.71■□□□□ 0.91
BRK1-201ENST00000530758 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
BRK1-201ENST00000530758 MTFR1LQ9H019 292 aa20.71■□□□□ 0.91
BRK1-201ENST00000530758 CT47B1P0C2W7 299 aaPredicted RBP20.7■□□□□ 0.9
BRK1-201ENST00000530758 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
BRK1-201ENST00000530758 HDGFL1Q5TGJ6 251 aa20.7■□□□□ 0.9
BRK1-201ENST00000530758 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
BRK1-201ENST00000530758 DDX21Q9NR30 783 aaKnown RBP eCLIP20.7■□□□□ 0.9
BRK1-201ENST00000530758 C4AP0C0L4 1744 aa20.7■□□□□ 0.9
BRK1-201ENST00000530758 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
BRK1-201ENST00000530758 SLC16A10Q8TF71 515 aa20.69■□□□□ 0.9
BRK1-201ENST00000530758 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
BRK1-201ENST00000530758 DBF4Q9UBU7 674 aaPredicted RBP20.69■□□□□ 0.9
BRK1-201ENST00000530758 A0A087WZG4 1122 aa20.68■□□□□ 0.9
BRK1-201ENST00000530758 COL15A1P39059 1388 aa20.68■□□□□ 0.9
BRK1-201ENST00000530758 SMIM5Q71RC9 77 aa20.67■□□□□ 0.9
BRK1-201ENST00000530758 PPP1R1BQ9UD71 204 aaPredicted RBP20.67■□□□□ 0.9
BRK1-201ENST00000530758 RGL2O15211 777 aa20.66■□□□□ 0.9
BRK1-201ENST00000530758 NARFQ9UHQ1 456 aa20.66■□□□□ 0.9
BRK1-201ENST00000530758 PIP4K2AP48426 406 aaPredicted RBP20.65■□□□□ 0.9
BRK1-201ENST00000530758 HYPKQ9NX55 129 aa20.65■□□□□ 0.9
BRK1-201ENST00000530758 CHPF2Q9P2E5 772 aa20.65■□□□□ 0.9
BRK1-201ENST00000530758 PHF14O94880 888 aa20.64■□□□□ 0.89
BRK1-201ENST00000530758 RFC4P35249 363 aa20.64■□□□□ 0.89
BRK1-201ENST00000530758 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
BRK1-201ENST00000530758 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
BRK1-201ENST00000530758 USP42Q9H9J4 1324 aaKnown RBP20.63■□□□□ 0.89
BRK1-201ENST00000530758 MYL6BP14649 208 aa20.63■□□□□ 0.89
BRK1-201ENST00000530758 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
BRK1-201ENST00000530758 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
BRK1-201ENST00000530758 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
BRK1-201ENST00000530758 ANXA1P04083 346 aa20.61■□□□□ 0.89
BRK1-201ENST00000530758 GYS1P13807 737 aa20.61■□□□□ 0.89
BRK1-201ENST00000530758 ALDH1L2Q3SY69 923 aa20.61■□□□□ 0.89
BRK1-201ENST00000530758 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
BRK1-201ENST00000530758 STK31Q9BXU1 1019 aa20.61■□□□□ 0.89
BRK1-201ENST00000530758 TBC1D2BQ9UPU7 963 aa20.61■□□□□ 0.89
BRK1-201ENST00000530758 NUP98P52948 1817 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 ZPR1O75312 459 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 CAMTA2O94983 1202 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 SLC4A2P04920 1241 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 COPS6Q7L5N1 327 aa20.6■□□□□ 0.89
BRK1-201ENST00000530758 FHDC1Q9C0D6 1143 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms