RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
TSPAN4-218ENST00000529566 STARD3NLO95772 234 aa21.21■□□□□ 0.99
TSPAN4-218ENST00000529566 ARXQ96QS3 562 aa21.21■□□□□ 0.99
TSPAN4-218ENST00000529566 PPP1R1BQ9UD71 204 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-218ENST00000529566 ZBTB1Q9Y2K1 713 aa21.21■□□□□ 0.99
TSPAN4-218ENST00000529566 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-218ENST00000529566 USP16Q9Y5T5 823 aa21.2■□□□□ 0.98
TSPAN4-218ENST00000529566 KDM3BQ7LBC6 1761 aa21.19■□□□□ 0.98
TSPAN4-218ENST00000529566 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-218ENST00000529566 POLD1P28340 1107 aa21.19■□□□□ 0.98
TSPAN4-218ENST00000529566 EIF4A1P60842 406 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-218ENST00000529566 RFC4P35249 363 aa21.18■□□□□ 0.98
TSPAN4-218ENST00000529566 BABAM1Q9NWV8 329 aa21.18■□□□□ 0.98
TSPAN4-218ENST00000529566 GYS1P13807 737 aa21.17■□□□□ 0.98
TSPAN4-218ENST00000529566 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-218ENST00000529566 FHDC1Q9C0D6 1143 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-218ENST00000529566 CHL1O00533 1208 aa21.16■□□□□ 0.98
TSPAN4-218ENST00000529566 A1BGP04217 495 aa21.16■□□□□ 0.98
TSPAN4-218ENST00000529566 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-218ENST00000529566 SRP68Q9UHB9 627 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-218ENST00000529566 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
TSPAN4-218ENST00000529566 USP42Q9H9J4 1324 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-218ENST00000529566 GIGYF1O75420 1035 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-218ENST00000529566 SYT17Q9BSW7 474 aa21.15■□□□□ 0.98
TSPAN4-218ENST00000529566 TSPYL4Q9UJ04 414 aa21.15■□□□□ 0.98
TSPAN4-218ENST00000529566 NLGN1Q8N2Q7 840 aa21.14■□□□□ 0.97
TSPAN4-218ENST00000529566 COL15A1P39059 1388 aa21.13■□□□□ 0.97
TSPAN4-218ENST00000529566 IL6STP40189 918 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-218ENST00000529566 NBPF26B4DH59 902 aa21.12■□□□□ 0.97
TSPAN4-218ENST00000529566 NBPF10Q6P3W6 841 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-218ENST00000529566 NBPF15Q8N660 670 aa21.12■□□□□ 0.97
TSPAN4-218ENST00000529566 NARFQ9UHQ1 456 aa21.12■□□□□ 0.97
TSPAN4-218ENST00000529566 MMP10P09238 476 aa21.11■□□□□ 0.97
TSPAN4-218ENST00000529566 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
TSPAN4-218ENST00000529566 FKBP8Q14318 412 aa21.11■□□□□ 0.97
TSPAN4-218ENST00000529566 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
TSPAN4-218ENST00000529566 PIP4K2AP48426 406 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-218ENST00000529566 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-218ENST00000529566 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
TSPAN4-218ENST00000529566 CFAP44Q96MT7 982 aa21.1■□□□□ 0.97
TSPAN4-218ENST00000529566 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
TSPAN4-218ENST00000529566 ZPR1O75312 459 aa21.09■□□□□ 0.97
TSPAN4-218ENST00000529566 CCDC27Q2M243 656 aa21.09■□□□□ 0.97
TSPAN4-218ENST00000529566 A0A087WZG4 1122 aa21.08■□□□□ 0.97
TSPAN4-218ENST00000529566 TM4SF1P30408 202 aa21.08■□□□□ 0.97
TSPAN4-218ENST00000529566 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.97
TSPAN4-218ENST00000529566 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-218ENST00000529566 WWC1Q8IX03 1113 aa21.07■□□□□ 0.96
TSPAN4-218ENST00000529566 DDR1Q08345 913 aa21.06■□□□□ 0.96
TSPAN4-218ENST00000529566 KRT24Q2M2I5 525 aa21.06■□□□□ 0.96
TSPAN4-218ENST00000529566 MBIPQ9NS73 344 aa21.06■□□□□ 0.96
TSPAN4-218ENST00000529566 IFT57Q9NWB7 429 aa21.06■□□□□ 0.96
TSPAN4-218ENST00000529566 TBC1D2BQ9UPU7 963 aa21.06■□□□□ 0.96
TSPAN4-218ENST00000529566 CD2APQ9Y5K6 639 aa21.06■□□□□ 0.96
TSPAN4-218ENST00000529566 LAMB4A4D0S4 1761 aa21.05■□□□□ 0.96
TSPAN4-218ENST00000529566 CAMTA2O94983 1202 aa21.05■□□□□ 0.96
TSPAN4-218ENST00000529566 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-218ENST00000529566 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
TSPAN4-218ENST00000529566 ZNF330Q9Y3S2 320 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-218ENST00000529566 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
TSPAN4-218ENST00000529566 POLRMTO00411 1230 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-218ENST00000529566 GNAI1P63096 354 aa21.03■□□□□ 0.96
TSPAN4-218ENST00000529566 NFIXQ14938 502 aa21.03■□□□□ 0.96
TSPAN4-218ENST00000529566 PDIA6Q15084 440 aa21.03■□□□□ 0.96
TSPAN4-218ENST00000529566 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
TSPAN4-218ENST00000529566 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-218ENST00000529566 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
TSPAN4-218ENST00000529566 DZIP3Q86Y13 1208 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-218ENST00000529566 PARP3Q9Y6F1 533 aa21.02■□□□□ 0.96
TSPAN4-218ENST00000529566 ERBB4Q15303 1308 aa21.01■□□□□ 0.95
TSPAN4-218ENST00000529566 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
TSPAN4-218ENST00000529566 C10orf71Q711Q0 1435 aa20.99■□□□□ 0.95
TSPAN4-218ENST00000529566 HOXB7P09629 217 aa20.99■□□□□ 0.95
TSPAN4-218ENST00000529566 TBC1D9BQ66K14 1250 aa20.99■□□□□ 0.95
TSPAN4-218ENST00000529566 IL16Q14005 1332 aa20.99■□□□□ 0.95
TSPAN4-218ENST00000529566 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
TSPAN4-218ENST00000529566 PROSER3Q2NL68 480 aa20.98■□□□□ 0.95
TSPAN4-218ENST00000529566 DUSP27Q5VZP5 1158 aa20.98■□□□□ 0.95
TSPAN4-218ENST00000529566 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-218ENST00000529566 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-218ENST00000529566 KIF13BQ9NQT8 1826 aa20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 RGL2O15211 777 aa20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 MYL6BP14649 208 aa20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 CLEC4GQ6UXB4 293 aa20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 TTLL7Q6ZT98 887 aa20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 GOLGB1Q14789 3259 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-218ENST00000529566 UTRNP46939 3433 aa20.96■□□□□ 0.95
TSPAN4-218ENST00000529566 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
TSPAN4-218ENST00000529566 MIER1Q8N108 512 aa20.96■□□□□ 0.95
TSPAN4-218ENST00000529566 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
TSPAN4-218ENST00000529566 C8orf58Q8NAV2 365 aa20.96■□□□□ 0.95
TSPAN4-218ENST00000529566 NECTIN2Q92692 538 aa20.96■□□□□ 0.95
TSPAN4-218ENST00000529566 ANXA1P04083 346 aa20.95■□□□□ 0.94
TSPAN4-218ENST00000529566 SERPINB2P05120 415 aa20.95■□□□□ 0.94
TSPAN4-218ENST00000529566 HLFQ16534 295 aa20.95■□□□□ 0.94
TSPAN4-218ENST00000529566 BICDL1Q6ZP65 573 aa20.95■□□□□ 0.94
TSPAN4-218ENST00000529566 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-218ENST00000529566 ERVV-1B6SEH8 477 aa20.94■□□□□ 0.94
TSPAN4-218ENST00000529566 TGFB2P61812 414 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms