RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
CTR9-204ENST00000529355 LYSMD3Q7Z3D4 306 aa8.95□□□□□ -0.98
CTR9-204ENST00000529355 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
CTR9-204ENST00000529355 SCG3Q8WXD2 468 aaKnown RBP8.95□□□□□ -0.98
CTR9-204ENST00000529355 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
CTR9-204ENST00000529355 GPC1P35052 558 aa8.94□□□□□ -0.98
CTR9-204ENST00000529355 TMEM214Q6NUQ4 689 aaKnown RBP8.94□□□□□ -0.98
CTR9-204ENST00000529355 KLRG1Q96E93 195 aa8.94□□□□□ -0.98
CTR9-204ENST00000529355 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
CTR9-204ENST00000529355 OCLNQ16625 522 aa8.93□□□□□ -0.98
CTR9-204ENST00000529355 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
CTR9-204ENST00000529355 NBPF15Q8N660 670 aa8.93□□□□□ -0.98
CTR9-204ENST00000529355 CHMP7Q8WUX9 453 aaPredicted RBP8.93□□□□□ -0.98
CTR9-204ENST00000529355 ATAD2Q6PL18 1390 aa8.93□□□□□ -0.98
CTR9-204ENST00000529355 WEE1P30291 646 aa8.92□□□□□ -0.98
CTR9-204ENST00000529355 CABP1Q9NZU7 370 aa8.92□□□□□ -0.98
CTR9-204ENST00000529355 SPATA31C2B4DYI2 1134 aa8.91□□□□□ -0.98
CTR9-204ENST00000529355 PLA2G4AP47712 749 aa8.91□□□□□ -0.98
CTR9-204ENST00000529355 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
CTR9-204ENST00000529355 CLP1Q92989 425 aaKnown RBP8.91□□□□□ -0.98
CTR9-204ENST00000529355 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
CTR9-204ENST00000529355 TXLNAP40222 546 aa8.9□□□□□ -0.98
CTR9-204ENST00000529355 PTSQ03393 145 aa8.9□□□□□ -0.98
CTR9-204ENST00000529355 FKBP5Q13451 457 aaPredicted RBP8.9□□□□□ -0.98
CTR9-204ENST00000529355 SWI5Q1ZZU3 235 aa8.9□□□□□ -0.98
CTR9-204ENST00000529355 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.9□□□□□ -0.98
CTR9-204ENST00000529355 RHBDD1Q8TEB9 315 aa8.9□□□□□ -0.98
CTR9-204ENST00000529355 HCN4Q9Y3Q4 1203 aa8.9□□□□□ -0.98
CTR9-204ENST00000529355 NOS2P35228 1153 aa8.89□□□□□ -0.99
CTR9-204ENST00000529355 VEGFBP49765 207 aa8.89□□□□□ -0.99
CTR9-204ENST00000529355 TAS1R3Q7RTX0 852 aa8.89□□□□□ -0.99
CTR9-204ENST00000529355 TMEM151AQ8N4L1 468 aa8.89□□□□□ -0.99
CTR9-204ENST00000529355 L3MBTL2Q969R5 705 aa8.89□□□□□ -0.99
CTR9-204ENST00000529355 MKNK1Q9BUB5 465 aa8.89□□□□□ -0.99
CTR9-204ENST00000529355 EML1O00423 815 aa8.88□□□□□ -0.99
CTR9-204ENST00000529355 ATP2B4P23634 1241 aa8.88□□□□□ -0.99
CTR9-204ENST00000529355 GNASQ5JWF2 1037 aa8.88□□□□□ -0.99
CTR9-204ENST00000529355 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
CTR9-204ENST00000529355 C2orf49Q9BVC5 232 aaPredicted RBP8.88□□□□□ -0.99
CTR9-204ENST00000529355 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
CTR9-204ENST00000529355 CUEDC1Q9NWM3 386 aaPredicted RBP8.88□□□□□ -0.99
CTR9-204ENST00000529355 SLC35F4A4IF30 521 aa8.87□□□□□ -0.99
CTR9-204ENST00000529355 IGFBP4P22692 258 aa8.87□□□□□ -0.99
CTR9-204ENST00000529355 SSFA2P28290 1259 aa8.87□□□□□ -0.99
CTR9-204ENST00000529355 TEAD4Q15561 434 aa8.87□□□□□ -0.99
CTR9-204ENST00000529355 TIMMDC1Q9NPL8 285 aa8.87□□□□□ -0.99
CTR9-204ENST00000529355 CXXC1Q9P0U4 656 aaPredicted RBP8.87□□□□□ -0.99
CTR9-204ENST00000529355 ZNF232Q9UNY5 417 aa8.87□□□□□ -0.99
CTR9-204ENST00000529355 H3BM21 787 aa8.86□□□□□ -0.99
CTR9-204ENST00000529355 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
CTR9-204ENST00000529355 GAS2L1Q99501 681 aaPredicted RBP8.86□□□□□ -0.99
CTR9-204ENST00000529355 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
CTR9-204ENST00000529355 USTQ9Y2C2 406 aa8.86□□□□□ -0.99
CTR9-204ENST00000529355 SERTM1A2A2V5 107 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 THBS1P07996 1170 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 MSX1P28360 303 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
CTR9-204ENST00000529355 XP32Q5T750 250 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 CCDC155Q8N6L0 562 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 C7orf43Q8WVR3 580 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 SEPT3Q9UH03 358 aa8.85□□□□□ -0.99
CTR9-204ENST00000529355 ATP4AP20648 1035 aa8.84□□□□□ -0.99
CTR9-204ENST00000529355 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
CTR9-204ENST00000529355 GSK3AP49840 483 aa8.84□□□□□ -0.99
CTR9-204ENST00000529355 NAA30Q147X3 362 aaPredicted RBP8.84□□□□□ -0.99
CTR9-204ENST00000529355 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
CTR9-204ENST00000529355 SAP130Q9H0E3 1048 aa8.84□□□□□ -0.99
CTR9-204ENST00000529355 GDF11O95390 407 aa8.83□□□□□ -1
CTR9-204ENST00000529355 PHACTR1Q9C0D0 580 aa8.83□□□□□ -1
CTR9-204ENST00000529355 RUBCNLQ9H714 662 aa8.83□□□□□ -1
CTR9-204ENST00000529355 PPFIA3O75145 1194 aa8.82□□□□□ -1
CTR9-204ENST00000529355 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
CTR9-204ENST00000529355 RNF225M0QZC1 329 aaPredicted RBP8.81□□□□□ -1
CTR9-204ENST00000529355 WDR44Q5JSH3 913 aa8.81□□□□□ -1
CTR9-204ENST00000529355 FAM26DQ5JW98 314 aa8.81□□□□□ -1
CTR9-204ENST00000529355 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
CTR9-204ENST00000529355 ALDH16A1Q8IZ83 802 aa8.81□□□□□ -1
CTR9-204ENST00000529355 LRFN2Q9ULH4 789 aa8.81□□□□□ -1
CTR9-204ENST00000529355 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
CTR9-204ENST00000529355 ERBB4Q15303 1308 aa8.8□□□□□ -1
CTR9-204ENST00000529355 FOXO3O43524 673 aa8.8□□□□□ -1
CTR9-204ENST00000529355 DBN1Q16643 649 aa8.8□□□□□ -1
CTR9-204ENST00000529355 STAG2Q8N3U4 1231 aa8.8□□□□□ -1
CTR9-204ENST00000529355 ZIC5Q96T25 663 aa8.8□□□□□ -1
CTR9-204ENST00000529355 TRAIPQ9BWF2 469 aa8.8□□□□□ -1
CTR9-204ENST00000529355 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
CTR9-204ENST00000529355 A0A1B0GTH6 734 aa8.79□□□□□ -1
CTR9-204ENST00000529355 F11P03951 625 aa8.79□□□□□ -1
CTR9-204ENST00000529355 RASSF7Q02833 373 aa8.79□□□□□ -1
CTR9-204ENST00000529355 HOMEZQ8IX15 550 aa8.79□□□□□ -1
CTR9-204ENST00000529355 ZNF280CQ8ND82 737 aa8.79□□□□□ -1
CTR9-204ENST00000529355 KLK14Q9P0G3 267 aa8.79□□□□□ -1
CTR9-204ENST00000529355 ITGA6P23229 1130 aa8.78□□□□□ -1
CTR9-204ENST00000529355 HIRAP54198 1017 aaPredicted RBP8.78□□□□□ -1
CTR9-204ENST00000529355 MTMR3Q13615 1198 aa8.78□□□□□ -1
CTR9-204ENST00000529355 COX20Q5RI15 118 aa8.78□□□□□ -1
CTR9-204ENST00000529355 HSH2DQ96JZ2 352 aa8.78□□□□□ -1
CTR9-204ENST00000529355 BCS1LQ9Y276 419 aa8.78□□□□□ -1
CTR9-204ENST00000529355 A0A1W2PNR3 127 aa8.77□□□□□ -1.01
CTR9-204ENST00000529355 IGHA1P01876 353 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms