RNA–Protein interactions for RNA: ENST00000528810.1

ARHGAP39-203, Transcript of Rho GTPase activating protein 39, humanhuman

TSL 4

Gene ARHGAP39, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-203ENST00000528810 MYH16Q9H6N6 1097 aa20.4■□□□□ 0.86
ARHGAP39-203ENST00000528810 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.86
ARHGAP39-203ENST00000528810 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
ARHGAP39-203ENST00000528810 ELL2O00472 640 aaPredicted RBP20.39■□□□□ 0.85
ARHGAP39-203ENST00000528810 TFCP2L1Q9NZI6 479 aa20.39■□□□□ 0.85
ARHGAP39-203ENST00000528810 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
ARHGAP39-203ENST00000528810 GNPATO15228 680 aa20.38■□□□□ 0.85
ARHGAP39-203ENST00000528810 R3HDM1Q15032 1099 aaKnown RBP20.38■□□□□ 0.85
ARHGAP39-203ENST00000528810 RC3H1Q5TC82 1133 aaKnown RBP20.38■□□□□ 0.85
ARHGAP39-203ENST00000528810 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
ARHGAP39-203ENST00000528810 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
ARHGAP39-203ENST00000528810 PSDA5PKW4 1024 aaPredicted RBP20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 E9PSI1 815 aa20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 A1BGP04217 495 aa20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 SLFN5Q08AF3 891 aa20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
ARHGAP39-203ENST00000528810 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
ARHGAP39-203ENST00000528810 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
ARHGAP39-203ENST00000528810 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
ARHGAP39-203ENST00000528810 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
ARHGAP39-203ENST00000528810 ZBED9Q6R2W3 1325 aa20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 PHF14O94880 888 aa20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 EXOSC9Q06265 439 aaKnown RBP20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 TSPYL6Q8N831 410 aa20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 RTCBQ9Y3I0 505 aaKnown RBP20.35■□□□□ 0.85
ARHGAP39-203ENST00000528810 QSER1Q2KHR3 1735 aa20.34■□□□□ 0.85
ARHGAP39-203ENST00000528810 PIP4K2AP48426 406 aaPredicted RBP20.34■□□□□ 0.85
ARHGAP39-203ENST00000528810 MSH5O43196 834 aa20.33■□□□□ 0.85
ARHGAP39-203ENST00000528810 AMIGO3Q86WK7 504 aa20.33■□□□□ 0.85
ARHGAP39-203ENST00000528810 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
ARHGAP39-203ENST00000528810 HOXB7P09629 217 aa20.32■□□□□ 0.84
ARHGAP39-203ENST00000528810 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
ARHGAP39-203ENST00000528810 HDGFL1Q5TGJ6 251 aa20.32■□□□□ 0.84
ARHGAP39-203ENST00000528810 PNPLA7Q6ZV29 1317 aa20.31■□□□□ 0.84
ARHGAP39-203ENST00000528810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.31■□□□□ 0.84
ARHGAP39-203ENST00000528810 TRAPPC3LQ5T215 181 aa20.31■□□□□ 0.84
ARHGAP39-203ENST00000528810 SRCAPQ6ZRS2 3230 aa20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 NBPF26B4DH59 902 aa20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 SSFA2P28290 1259 aa20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 NBPF10Q6P3W6 841 aaKnown RBP20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 COL23A1Q86Y22 540 aaPredicted RBP20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 NBPF15Q8N660 670 aa20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 FLAD1Q8NFF5 587 aa20.3■□□□□ 0.84
ARHGAP39-203ENST00000528810 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
ARHGAP39-203ENST00000528810 MYL6BP14649 208 aa20.29■□□□□ 0.84
ARHGAP39-203ENST00000528810 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
ARHGAP39-203ENST00000528810 ARXQ96QS3 562 aa20.29■□□□□ 0.84
ARHGAP39-203ENST00000528810 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
ARHGAP39-203ENST00000528810 ANXA1P04083 346 aa20.28■□□□□ 0.84
ARHGAP39-203ENST00000528810 IL6STP40189 918 aaPredicted RBP20.28■□□□□ 0.84
ARHGAP39-203ENST00000528810 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
ARHGAP39-203ENST00000528810 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
ARHGAP39-203ENST00000528810 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 COL15A1P39059 1388 aa20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 VAMP4O75379 141 aa20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 ADRA2BP18089 450 aa20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 RFC4P35249 363 aa20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
ARHGAP39-203ENST00000528810 ERBB4Q15303 1308 aa20.27■□□□□ 0.83
ARHGAP39-203ENST00000528810 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
ARHGAP39-203ENST00000528810 CASZ1Q86V15 1759 aa20.26■□□□□ 0.83
ARHGAP39-203ENST00000528810 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
ARHGAP39-203ENST00000528810 CCDC30Q5VVM6 783 aa20.26■□□□□ 0.83
ARHGAP39-203ENST00000528810 CHMP4AQ9BY43 222 aa20.26■□□□□ 0.83
ARHGAP39-203ENST00000528810 PDIA6Q15084 440 aa20.25■□□□□ 0.83
ARHGAP39-203ENST00000528810 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
ARHGAP39-203ENST00000528810 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
ARHGAP39-203ENST00000528810 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
ARHGAP39-203ENST00000528810 A0A087WZG4 1122 aa20.24■□□□□ 0.83
ARHGAP39-203ENST00000528810 ZPR1O75312 459 aa20.23■□□□□ 0.83
ARHGAP39-203ENST00000528810 DZIP3Q86Y13 1208 aaKnown RBP20.23■□□□□ 0.83
ARHGAP39-203ENST00000528810 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
ARHGAP39-203ENST00000528810 SRP68Q9UHB9 627 aaKnown RBP20.23■□□□□ 0.83
ARHGAP39-203ENST00000528810 ZBTB7AO95365 584 aa20.22■□□□□ 0.83
ARHGAP39-203ENST00000528810 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
ARHGAP39-203ENST00000528810 USPL1Q5W0Q7 1092 aa20.21■□□□□ 0.83
ARHGAP39-203ENST00000528810 SLC16A10Q8TF71 515 aa20.21■□□□□ 0.83
ARHGAP39-203ENST00000528810 HYPKQ9NX55 129 aa20.21■□□□□ 0.83
ARHGAP39-203ENST00000528810 NARFQ9UHQ1 456 aa20.21■□□□□ 0.83
ARHGAP39-203ENST00000528810 MSL1Q68DK7 614 aa20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 COPS6Q7L5N1 327 aa20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 LRP10Q7Z4F1 713 aa20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 XAGE3Q8WTP9 111 aa20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 ATF5Q9Y2D1 282 aaPredicted RBP20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
ARHGAP39-203ENST00000528810 NUP98P52948 1817 aa20.19■□□□□ 0.82
ARHGAP39-203ENST00000528810 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
ARHGAP39-203ENST00000528810 PHAXQ9H814 394 aaKnown RBP20.19■□□□□ 0.82
ARHGAP39-203ENST00000528810 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
ARHGAP39-203ENST00000528810 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
ARHGAP39-203ENST00000528810 CAMTA2O94983 1202 aa20.17■□□□□ 0.82
ARHGAP39-203ENST00000528810 GYS1P13807 737 aa20.17■□□□□ 0.82
ARHGAP39-203ENST00000528810 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms