RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
NXF1-206ENST00000527902 NCBP3Q53F19 620 aaKnown RBP23.26■■□□□ 1.31
NXF1-206ENST00000527902 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
NXF1-206ENST00000527902 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
NXF1-206ENST00000527902 RPS6KA4O75676 772 aa23.25■■□□□ 1.31
NXF1-206ENST00000527902 SNRPA1P09661 255 aaKnown RBP23.25■■□□□ 1.31
NXF1-206ENST00000527902 SSFA2P28290 1259 aa23.25■■□□□ 1.31
NXF1-206ENST00000527902 CFAP44Q96MT7 982 aa23.25■■□□□ 1.31
NXF1-206ENST00000527902 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
NXF1-206ENST00000527902 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
NXF1-206ENST00000527902 STARD3NLO95772 234 aa23.23■■□□□ 1.31
NXF1-206ENST00000527902 TEX13AQ9BXU3 409 aaPredicted RBP23.23■■□□□ 1.31
NXF1-206ENST00000527902 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
NXF1-206ENST00000527902 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
NXF1-206ENST00000527902 RTCBQ9Y3I0 505 aaKnown RBP23.23■■□□□ 1.31
NXF1-206ENST00000527902 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
NXF1-206ENST00000527902 FLAD1Q8NFF5 587 aa23.22■■□□□ 1.31
NXF1-206ENST00000527902 SOS1Q07889 1333 aaPredicted RBP23.22■■□□□ 1.31
NXF1-206ENST00000527902 MSH5O43196 834 aa23.21■■□□□ 1.31
NXF1-206ENST00000527902 A1BGP04217 495 aa23.21■■□□□ 1.31
NXF1-206ENST00000527902 CALD1Q05682 793 aaKnown RBP23.21■■□□□ 1.31
NXF1-206ENST00000527902 MTFR1LQ9H019 292 aa23.21■■□□□ 1.31
NXF1-206ENST00000527902 ATF5Q9Y2D1 282 aaPredicted RBP23.21■■□□□ 1.31
NXF1-206ENST00000527902 PIP4K2AP48426 406 aaPredicted RBP23.2■■□□□ 1.3
NXF1-206ENST00000527902 GNAI1P63096 354 aa23.2■■□□□ 1.3
NXF1-206ENST00000527902 ARHGEF1Q92888 912 aaKnown RBP23.2■■□□□ 1.3
NXF1-206ENST00000527902 CANXP27824 592 aaKnown RBP23.19■■□□□ 1.3
NXF1-206ENST00000527902 TRAPPC3LQ5T215 181 aa23.19■■□□□ 1.3
NXF1-206ENST00000527902 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
NXF1-206ENST00000527902 ZNF521Q96K83 1311 aa23.18■■□□□ 1.3
NXF1-206ENST00000527902 ADRA2BP18089 450 aa23.18■■□□□ 1.3
NXF1-206ENST00000527902 PTGER2P43116 358 aa23.18■■□□□ 1.3
NXF1-206ENST00000527902 COL15A1P39059 1388 aa23.17■■□□□ 1.3
NXF1-206ENST00000527902 NBPF26B4DH59 902 aa23.17■■□□□ 1.3
NXF1-206ENST00000527902 MSL1Q68DK7 614 aa23.17■■□□□ 1.3
NXF1-206ENST00000527902 NBPF10Q6P3W6 841 aaKnown RBP23.17■■□□□ 1.3
NXF1-206ENST00000527902 NBPF15Q8N660 670 aa23.17■■□□□ 1.3
NXF1-206ENST00000527902 SGIP1Q9BQI5 828 aa23.17■■□□□ 1.3
NXF1-206ENST00000527902 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
NXF1-206ENST00000527902 IL16Q14005 1332 aa23.16■■□□□ 1.3
NXF1-206ENST00000527902 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
NXF1-206ENST00000527902 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
NXF1-206ENST00000527902 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
NXF1-206ENST00000527902 NGEFQ8N5V2 710 aa23.15■■□□□ 1.3
NXF1-206ENST00000527902 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
NXF1-206ENST00000527902 SRP68Q9UHB9 627 aaKnown RBP23.15■■□□□ 1.3
NXF1-206ENST00000527902 SCN7AQ01118 1682 aa23.14■■□□□ 1.29
NXF1-206ENST00000527902 BCORQ6W2J9 1755 aa23.14■■□□□ 1.29
NXF1-206ENST00000527902 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
NXF1-206ENST00000527902 RFC4P35249 363 aa23.13■■□□□ 1.29
NXF1-206ENST00000527902 IL6STP40189 918 aaPredicted RBP23.13■■□□□ 1.29
NXF1-206ENST00000527902 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
NXF1-206ENST00000527902 FANCIQ9NVI1 1328 aa23.11■■□□□ 1.29
NXF1-206ENST00000527902 GYS1P13807 737 aa23.11■■□□□ 1.29
NXF1-206ENST00000527902 EIF2S2P20042 333 aaKnown RBP23.11■■□□□ 1.29
NXF1-206ENST00000527902 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
NXF1-206ENST00000527902 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
NXF1-206ENST00000527902 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
NXF1-206ENST00000527902 PDIA6Q15084 440 aa23.09■■□□□ 1.29
NXF1-206ENST00000527902 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
NXF1-206ENST00000527902 BCL2L12Q9HB09 334 aa23.09■■□□□ 1.29
NXF1-206ENST00000527902 NARFQ9UHQ1 456 aa23.09■■□□□ 1.29
NXF1-206ENST00000527902 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
NXF1-206ENST00000527902 HOXB7P09629 217 aa23.08■■□□□ 1.29
NXF1-206ENST00000527902 FKBP8Q14318 412 aa23.08■■□□□ 1.29
NXF1-206ENST00000527902 PROSER3Q2NL68 480 aa23.08■■□□□ 1.29
NXF1-206ENST00000527902 TSPYL6Q8N831 410 aa23.08■■□□□ 1.29
NXF1-206ENST00000527902 TBC1D2BQ9UPU7 963 aa23.08■■□□□ 1.29
NXF1-206ENST00000527902 ANXA1P04083 346 aa23.07■■□□□ 1.28
NXF1-206ENST00000527902 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
NXF1-206ENST00000527902 ERBB4Q15303 1308 aa23.07■■□□□ 1.28
NXF1-206ENST00000527902 A0A087WZG4 1122 aa23.06■■□□□ 1.28
NXF1-206ENST00000527902 ZPR1O75312 459 aa23.06■■□□□ 1.28
NXF1-206ENST00000527902 MYL6BP14649 208 aa23.06■■□□□ 1.28
NXF1-206ENST00000527902 CAMTA2O94983 1202 aa23.05■■□□□ 1.28
NXF1-206ENST00000527902 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
NXF1-206ENST00000527902 DZIP3Q86Y13 1208 aaKnown RBP23.05■■□□□ 1.28
NXF1-206ENST00000527902 POLD1P28340 1107 aa23.04■■□□□ 1.28
NXF1-206ENST00000527902 NLGN1Q8N2Q7 840 aa23.04■■□□□ 1.28
NXF1-206ENST00000527902 ARXQ96QS3 562 aa23.04■■□□□ 1.28
NXF1-206ENST00000527902 CHPF2Q9P2E5 772 aa23.04■■□□□ 1.28
NXF1-206ENST00000527902 NUP98P52948 1817 aa23.03■■□□□ 1.28
NXF1-206ENST00000527902 MMP10P09238 476 aa23.03■■□□□ 1.28
NXF1-206ENST00000527902 AFDNP55196 1824 aaKnown RBP23.03■■□□□ 1.28
NXF1-206ENST00000527902 EXOSC9Q06265 439 aaKnown RBP23.02■■□□□ 1.28
NXF1-206ENST00000527902 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
NXF1-206ENST00000527902 TTLL7Q6ZT98 887 aa23.02■■□□□ 1.28
NXF1-206ENST00000527902 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
NXF1-206ENST00000527902 PPP1R1BQ9UD71 204 aaPredicted RBP23.02■■□□□ 1.28
NXF1-206ENST00000527902 DDR1Q08345 913 aa23.01■■□□□ 1.27
NXF1-206ENST00000527902 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
NXF1-206ENST00000527902 MYH16Q9H6N6 1097 aa23.01■■□□□ 1.27
NXF1-206ENST00000527902 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
NXF1-206ENST00000527902 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.27
NXF1-206ENST00000527902 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
NXF1-206ENST00000527902 TM4SF1P30408 202 aa22.99■■□□□ 1.27
NXF1-206ENST00000527902 SLFN5Q08AF3 891 aa22.99■■□□□ 1.27
NXF1-206ENST00000527902 NFIXQ14938 502 aa22.99■■□□□ 1.27
NXF1-206ENST00000527902 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
NXF1-206ENST00000527902 KIF13BQ9NQT8 1826 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms